HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:71.8 nTPM
HPA Brain:185.3 nTPM
GTEx:71.8 nTPM
FANTOM5:157.5 Scaled Tags Per Million
Pig:73.0 nTPM
Mouse:135.2 nTPM
Allen mouse:15.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041785Antibody HPA069311Antibody CAB005580
Glial cells LowMediumHigh
Neuronal cells MediumHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 185.3
Sample id Sample description nTPM
Hippocampus
nTPM: 168.7
1855 Male, age 76, left hemisphere 189.7
1898 Male, age 80, left hemisphere 185.6
2621 Female, age 67, right hemisphere 184.3
2148 Female, age 91, left hemisphere 180.6
1911 Female, age 85, right hemisphere 136.8
2529 Female, age 94, left hemisphere 135.3
Dentate gyrus
nTPM: 178.5
2530 Female, age 94, left hemisphere 226.5
1927 Female, age 91, both hemispheres 188.3
2531 Female, age 67, both hemispheres 181.9
2010 Male, age 76, both hemispheres 180.4
2246 Female, age 85, both hemispheres 148.7
2528 Male, age 74, both hemispheres 145.0
Entorhinal gyrus
nTPM: 172.9
2613 Female, age 94, left hemisphere 232.7
2764 Male, age 80, right hemisphere 198.8
2686 Male, age 75, right hemisphere 164.1
1787 Male, age 76, left hemisphere 162.2
1938 Female, age 85, left hemisphere 152.2
2117 Female, age 91, right hemisphere 127.7
Hippocampus, CA1
nTPM: 185.3
2749 Male, age 80, left hemisphere 276.0
2045 Male, age 76, both hemispheres 194.1
1873 Female, age 85, both hemispheres 173.7
2527 Male, age 74, both hemispheres 141.7
2082 Female, age 91, right hemisphere 140.9
Hippocampus, CA2
nTPM: 170.2
1892 Male, age 76, both hemispheres 210.8
1963 Male, age 80, left hemisphere 194.0
2437 Female, age 94, left hemisphere 190.0
1940 Female, age 85, left hemisphere 159.7
2113 Female, age 91, right hemisphere 138.1
2249 Male, age 74, both hemispheres 129.0
Hippocampus, CA3
nTPM: 181.3
2620 Female, age 94, left hemisphere 226.7
2137 Male, age 80, left hemisphere 218.7
2861 Female, age 67, both hemispheres 215.0
1867 Male, age 76, both hemispheres 180.8
1891 Female, age 85, both hemispheres 128.7
2436 Male, age 74, both hemispheres 117.7
Parahippocampal cortex
nTPM: 161.7
2622 Female, age 67, right hemisphere 187.8
2245 Female, age 91, both hemispheres 185.0
1850 Male, age 80, both hemispheres 166.8
2693 Female, age 94, both hemispheres 165.9
1990 Female, age 91, right hemisphere 161.5
2532 Female, age 72, left hemisphere 160.3
1933 Female, age 85, both hemispheres 153.9
2018 Male, age 76, both hemispheres 152.4
2692 Male, age 74, both hemispheres 143.3
2250 Female, age 67, right hemisphere 140.0
Perirhinal gyrus
nTPM: 178.7
2521 Female, age 94, right hemisphere 219.2
1794 Male, age 80, right hemisphere 190.6
1847 Female, age 91, left hemisphere 182.5
1841 Female, age 85, right hemisphere 153.3
2848 Male, age 76, right hemisphere 147.9
Subiculum
nTPM: 149.5
1901 Male, age 80, both hemispheres 171.2
2438 Female, age 94, left hemisphere 165.4
1977 Female, age 85, both hemispheres 151.8
2619 Male, age 74, both hemispheres 143.0
2042 Male, age 76, both hemispheres 142.5
2729 Female, age 91, right hemisphere 122.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 71.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.8
Samples: 197

Max nTPM: 142.0
Min nTPM: 29.3
Std nTPM: 21.8
Median nTPM: 71.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 142.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 133.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 130.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 128.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 127.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 113.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 112.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 112.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 111.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 109.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 109.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 157.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 157.5
FF:10153-102I9 76 years, female 165.5
FF:10169-103B7 60 years, female 149.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 73.0
Pig sample Sample description nTPM
Subiculum
nTPM: 67.8
Samples: 4

Max nTPM: 87.0
Min nTPM: 53.8
Sample A Female 87.0
Sample B Female 59.3
Sample C Male 71.1
Sample D Male 53.8
Dorsal hippocampus
nTPM: 65.7
Samples: 4

Max nTPM: 80.7
Min nTPM: 47.2
Sample A Female 80.7
Sample B Female 73.4
Sample C Male 61.4
Sample D Male 47.2
Entorhinal cortex
nTPM: 73.0
Samples: 4

Max nTPM: 78.5
Min nTPM: 68.8
Sample A Female 78.5
Sample B Female 68.8
Sample C Male 74.3
Sample D Male 70.5
Ventral hippocampus
nTPM: 70.5
Samples: 4

Max nTPM: 92.2
Min nTPM: 48.3
Sample A Female 66.9
Sample B Female 48.3
Sample C Male 92.2
Sample D Male 74.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 135.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 126.4
Samples: 4

Max nTPM: 144.8
Min nTPM: 118.6
Sample A Male 122.3
Sample B Male 118.6
Sample C Female 119.8
Sample D Female 144.8
Hippocampal formation
nTPM: 135.2
Samples: 4

Max nTPM: 155.7
Min nTPM: 114.3
Sample A Male 114.3
Sample B Male 143.6
Sample C Female 155.7
Sample D Female 127.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.6
69752065 Antisense, RP_050505_01_A07, Mouse strain C57BL/6J (56 days, male) 15.6

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