We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
GABARAPL1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • GABARAPL1
TISSUE PRIMARY DATA CEREBELLUM Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Cerebellum
Tissue proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Medium
Cells in molecular layer: Not detected
Purkinje cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:194.3 nTPM
HPA Brain:247.7 nTPM
GTEx:194.3 nTPM
FANTOM5:254.8 Scaled Tags Per Million
Pig:306.6 nTPM
Mouse:412.9 nTPM
Allen mouse:11.1 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051386
Purkinje cells Low
Cells in granular layer Medium
Cells in molecular layer Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

247.7
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 199.4
2101 Male, age 74, right hemisphere 286.9
2006 Male, age 61, right hemisphere 286.6
1768 Female, age 72, unknown 246.1
2055 Female, age 91, right hemisphere 213.6
1774 Male, age 80, left hemisphere 171.6
1769 Male, age 76, right hemisphere 151.7
1788 Male, age 55, unknown 125.0
2003 Female, age 85, right hemisphere 113.7
Cerebellar nuclei
nTPM: 247.7
2783 Female, age 72, unknown 385.2
1879 Male, age 55, unknown 288.8
2177 Female, age 85, both hemispheres 286.7
2882 Male, age 76, left hemisphere 259.4
1966 Female, age 91, left hemisphere 234.3
2175 Male, age 61, right hemisphere 213.8
2318 Male, age 74, left hemisphere 191.4
1871 Male, age 74, unknown 188.6
2005 Male, age 80, left hemisphere 180.7
Flocculonodular lobe
nTPM: 186.6
2004 Male, age 61, right hemisphere 350.7
1792 Male, age 74, unknown 181.8
2176 Female, age 91, right hemisphere 180.1
1771 Male, age 80, left hemisphere 172.6
1835 Female, age 85, right hemisphere 147.7
1767 Male, age 76, left hemisphere 139.8
1765 Male, age 55, unknown 133.8
Vermis
nTPM: 185.1
1751 Male, age 74, right hemisphere 275.1
1928 Female, age 72, unknown 235.5
2834 Male, age 80, left hemisphere 218.3
1778 Female, age 91, left hemisphere 217.7
1825 Male, age 74, unknown 166.0
1766 Male, age 55, unknown 151.9
1770 Male, age 76, left hemisphere 151.7
2460 Male, age 61, both hemispheres 133.2
1988 Female, age 85, left hemisphere 116.8

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

194.3
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 194.3
Samples: 215

Max nTPM: 317.9
Min nTPM: 100.9
Std nTPM: 39.3
Median nTPM: 196.7
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 317.9
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 283.8
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 281.4
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 280.8
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 279.1
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 278.8
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 276.1
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 271.1
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 267.0
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 265.4
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 265.2
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 261.7
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 260.9
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 254.9
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 254.8
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 252.7
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 251.1
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 251.0
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 245.3
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 245.1
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 244.2
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 243.3
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 242.5
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 241.5
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 237.8
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 237.5
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 236.6
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 235.7
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 235.6
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 235.0
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 233.8
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 232.2
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 231.3
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 230.9
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 230.5
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 229.3
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 229.2
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 229.0
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 228.9
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 228.4
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 226.4
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 226.0
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 225.8
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 225.6
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 225.6
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 224.9
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 224.3
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 224.0
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 223.1
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 223.0
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 222.9
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 222.9
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 221.9
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 220.5
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 219.3
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 219.2
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 218.9
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 218.7
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 215.0
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 214.5
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 214.2
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 213.4
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 213.3
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 213.1
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 212.9
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 211.9
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 211.8
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 211.7
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 210.6
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 210.0
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 209.7
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 209.1
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 208.8
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 208.7
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 208.5
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 208.4
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 208.1
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 208.0
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 208.0
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 207.7
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 207.6
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 207.0
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 207.0
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 205.9
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 205.6
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 205.3
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 205.1
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 203.6
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 203.3
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 202.8
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 202.4
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 202.4
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 202.3
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 201.7
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 201.6
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 201.4
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 201.3
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 200.8
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 199.9
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 199.9
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 199.4
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 198.1
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 197.6
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 197.2
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 196.9
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 196.9
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 196.9
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 196.7
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 196.5
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 196.1
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 195.6
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 195.2
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 195.0
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 195.0
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 194.9
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 194.9
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 194.6
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 193.7
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 192.8
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 190.5
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 187.6
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 187.2
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 186.8
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 186.5
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 186.2
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 185.8
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 185.3
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 184.3
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 183.6
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 183.6
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 182.8
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 182.8
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 181.4
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 181.3
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 180.6
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 180.1
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 179.8
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 179.6
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 177.6
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 177.5
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 177.5
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 177.1
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 176.6
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 176.5
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 175.5
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 174.0
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 173.8
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 173.6
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 173.5
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 172.4
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 171.7
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 171.4
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 171.4
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 171.2
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 170.5
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 170.1
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 170.0
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 169.6
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 169.5
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 169.1
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 167.6
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 166.9
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 166.1
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 165.3
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 164.9
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 164.8
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 164.5
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 163.9
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 163.6
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 163.6
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 163.4
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 163.4
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 163.3
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 162.3
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 162.0
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 161.9
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 161.7
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 160.3
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 160.3
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 160.1
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 159.6
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 158.9
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 157.7
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 155.9
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 155.4
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 154.2
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 151.2
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 150.4
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 149.6
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 146.5
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 146.0
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 145.7
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 143.3
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 136.9
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 136.9
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 136.7
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 136.5
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 135.9
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 135.3
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 133.7
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 131.4
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 130.2
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 129.1
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 126.6
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 126.0
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 123.0
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 118.5
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 117.7
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 117.3
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 116.8
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 116.5
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 112.5
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 111.1
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 110.9
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 100.9
Show allShow less
Brain - Cerebellum
Average nTPM: 172.2
Samples: 241

Max nTPM: 304.7
Min nTPM: 92.9
Std nTPM: 29.4
Median nTPM: 170.4
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 304.7
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 268.5
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 262.9
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 243.6
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 241.1
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 240.8
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 239.9
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 239.6
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 233.7
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 229.4
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 226.1
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 224.2
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 219.3
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 218.3
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 218.0
GTEX-145LS-3026-SM-5O99S 60-69 years, female 216.3
GTEX-12126-0926-SM-5FQTW 20-29 years, male 215.4
GTEX-15G19-2826-SM-6M48K 60-69 years, male 215.4
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 212.3
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 211.3
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 210.3
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 209.6
GTEX-WL46-2826-SM-3LK81 50-59 years, male 209.2
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 208.7
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 206.9
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 205.6
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 204.6
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 204.0
GTEX-14PN4-3026-SM-664O4 50-59 years, male 203.9
GTEX-RU72-2926-SM-2TF66 50-59 years, female 203.8
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 203.0
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 202.9
GTEX-13112-2926-SM-5DUWT 50-59 years, male 202.1
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 201.6
GTEX-1192X-3226-SM-5987D 50-59 years, male 201.4
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 199.9
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 199.5
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 199.3
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 198.1
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 197.9
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 197.9
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 196.5
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 195.9
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 195.8
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 195.3
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 194.7
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 194.4
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 194.3
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 194.0
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 193.7
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 192.8
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 192.6
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 192.5
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 192.2
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 191.0
GTEX-11NUK-3026-SM-5986K 50-59 years, male 190.8
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 190.7
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 189.9
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 189.1
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 188.8
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 188.8
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 188.5
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 188.4
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 188.3
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 186.6
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 186.6
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 186.3
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 185.5
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 185.0
GTEX-1B933-3026-SM-731DB 50-59 years, female 184.6
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 184.6
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 184.5
GTEX-18465-2926-SM-7KFSE 50-59 years, male 184.5
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 184.1
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 184.0
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 183.9
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 183.3
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 183.2
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 183.0
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 182.9
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 182.5
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 182.4
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 182.3
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 182.3
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 182.0
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 181.3
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 180.9
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 180.7
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 180.3
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 180.1
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 179.9
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 179.3
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 178.3
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 177.6
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 176.7
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 176.7
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 176.6
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 175.3
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 175.0
GTEX-X261-3126-SM-4PQZC 50-59 years, male 174.6
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 174.1
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 174.0
GTEX-17EVP-2926-SM-793BU 40-49 years, male 173.9
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 173.7
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 173.5
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 173.5
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 173.5
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 173.2
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 172.8
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 172.7
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 172.4
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 172.4
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 172.3
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 171.9
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 171.9
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 171.8
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 171.8
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 171.4
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 171.2
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 170.6
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 170.4
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 170.1
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 169.8
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 169.5
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 168.9
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 167.6
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 167.6
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 167.5
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 167.5
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 167.3
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 167.2
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 167.0
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 166.6
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 166.6
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 166.2
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 165.9
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 165.5
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 165.1
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 164.8
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 164.7
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 164.5
GTEX-17HII-2926-SM-79OMK 50-59 years, male 164.5
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 164.2
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 164.2
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 164.0
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 163.9
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 163.8
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 163.7
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 163.5
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 163.5
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 162.9
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 162.8
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 162.8
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 162.2
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 162.1
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 161.1
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 160.7
GTEX-14E6D-2926-SM-664OP 50-59 years, male 160.3
GTEX-14ABY-3026-SM-664NE 50-59 years, male 160.1
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 160.1
GTEX-11DYG-2926-SM-5H132 60-69 years, male 159.7
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 159.1
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 158.9
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 158.6
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 158.2
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 157.4
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 157.2
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 157.1
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 156.3
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 156.3
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 156.2
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 156.0
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 155.8
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 155.8
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 155.8
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 155.4
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 155.0
GTEX-11ONC-3026-SM-5985W 60-69 years, male 154.8
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 154.5
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 154.4
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 154.2
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 154.1
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 153.8
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 152.9
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 152.2
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 152.0
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 151.7
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 151.6
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 151.1
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 150.8
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 150.6
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 150.5
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 150.4
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 149.0
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 147.6
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 147.3
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 147.0
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 146.9
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 146.4
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 145.8
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 145.3
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 145.1
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 144.8
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 144.3
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 144.3
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 144.1
GTEX-11EI6-2926-SM-5985U 60-69 years, male 143.8
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 143.6
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 143.3
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 141.9
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 140.1
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 139.7
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 139.3
GTEX-144GL-2926-SM-5O99F 50-59 years, male 139.0
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 138.5
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 136.6
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 136.4
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 135.3
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 134.9
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 134.6
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 134.1
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 133.8
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 132.6
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 132.2
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 132.0
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 131.4
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 131.0
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 131.0
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 128.6
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 128.0
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 128.0
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 127.9
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 123.0
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 121.5
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 119.6
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 118.1
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 115.1
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 113.7
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 109.8
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 106.8
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 92.9
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

254.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 254.8
FF:10083-102B2 22-68 years, mixed 300.0
FF:10166-103B4 76 years, female 209.5

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

306.6
Pig sample Sample description nTPM
Cerebellum
nTPM: 306.7
Samples: 4

Max nTPM: 472.9
Min nTPM: 227.3
Sample A Female 472.9
Sample B Female 279.4
Sample C Male 227.3
Sample D Male 247.0

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

412.9
Mouse sample Sample description nTPM
Cerebellum
nTPM: 412.9
Samples: 4

Max nTPM: 424.9
Min nTPM: 405.2
Sample A Male 424.9
Sample B Male 409.9
Sample C Female 411.6
Sample D Female 405.2

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.1
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 11.1
71608204 Antisense, RP_050927_01_A12, Mouse strain C57BL/6J (56 days, male) 14.3
654925 Antisense, RP_040922_01_A11, Mouse strain C57BL/6J (56 days, male) 8.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org