We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
TPM1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • TPM1
TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:250.4 nTPM
HPA:118.6 nTPM
GTEx:250.4 nTPM
FANTOM5:439.8 Scaled Tags Per Million

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA000261Antibody HPA009066Antibody HPA047089Antibody HPA053624Antibody CAB017698
Glandular cells Not detectedNot detectedHighMediumNot detected










SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.6
overview
Female, age 68
Salivary gland sample 216
nTPM: 121.1
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 123.7
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 111
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

250.4
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 250.4
Samples: 162

Max nTPM: 5437.5
Min nTPM: 17.6
Std nTPM: 446.1
Median nTPM: 174.0
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 5437.5
GTEX-1R9PM-1726-SM-E8VOA 20-29 years, male 1861.8
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 833.7
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 790.8
GTEX-1B932-0626-SM-731EM 40-49 years, female 694.0
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 609.3
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 554.7
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 552.2
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 538.4
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 447.7
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 440.5
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 423.3
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 415.3
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 381.9
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 361.4
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 330.5
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 330.3
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 321.7
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 318.4
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 317.8
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 307.6
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 302.1
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 297.1
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 293.8
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 293.6
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 290.3
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 286.7
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 286.0
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 282.4
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 276.6
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 272.2
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 271.7
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 268.0
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 263.6
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 260.4
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 247.0
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 245.5
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 243.8
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 242.5
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 241.2
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 235.8
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 235.6
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 234.6
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 233.2
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 232.4
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 229.3
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 228.7
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 227.7
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 225.8
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 225.3
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 224.3
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 221.7
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 219.8
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 219.7
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 219.4
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 214.3
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 213.0
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 212.4
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 211.8
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 203.2
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 201.9
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 193.9
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 187.8
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 186.7
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 184.5
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 184.4
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 183.8
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 182.9
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 181.9
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 181.8
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 181.0
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 181.0
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 179.6
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 179.4
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 178.5
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 178.3
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 178.0
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 176.2
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 175.2
GTEX-178AV-1426-SM-6LLID 40-49 years, male 175.1
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 175.1
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 172.9
GTEX-11P82-0926-SM-5986X 20-29 years, male 171.9
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 171.9
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 170.9
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 170.7
GTEX-ZQG8-2126-SM-4YCF1 60-69 years, female 170.6
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 170.3
GTEX-Y111-2626-SM-4TT24 50-59 years, male 168.5
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 168.2
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 167.9
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 167.8
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 166.8
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 165.4
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 163.1
GTEX-WOFM-2126-SM-4OOSR 20-29 years, male 158.2
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 158.1
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 157.9
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 157.7
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 156.7
GTEX-13113-1526-SM-5EGHV 60-69 years, female 154.8
GTEX-X261-2426-SM-4PQZU 50-59 years, male 153.9
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 153.9
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 153.8
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 153.6
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 152.8
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 152.3
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 152.2
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 152.1
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 152.1
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 150.0
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 150.0
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 149.9
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 149.9
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 149.2
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 149.1
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 148.6
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 147.9
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 145.4
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 145.1
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 145.0
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 144.2
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 143.7
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 142.9
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 141.9
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 140.3
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 139.5
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 138.3
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 136.3
GTEX-1445S-2926-SM-5O993 60-69 years, male 134.7
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 133.3
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 132.8
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 132.7
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 132.2
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 131.9
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 131.9
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 130.7
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 128.9
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 127.7
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 125.1
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 119.2
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 118.6
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 118.0
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 117.8
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 113.8
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 112.0
GTEX-13O21-1926-SM-5MR39 50-59 years, male 111.0
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 110.6
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 109.9
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 103.9
GTEX-146FR-1226-SM-5SIA7 60-69 years, female 101.5
GTEX-15SHV-2226-SM-6M464 60-69 years, male 101.1
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 99.1
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 94.1
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 87.9
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 67.3
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 61.2
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 60.3
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 47.4
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 45.0
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 34.4
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 17.6
Show allShow less

SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

439.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 354.2
FF:10199-103F1 23 years, male 354.2
Salivary gland
Scaled Tags Per Million: 254.5
FF:10093-102C3 16-60 years, mixed 254.5
Submaxillary gland
Scaled Tags Per Million: 439.8
FF:10202-103F4 24 years, male 439.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org