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RPS11
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TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:974.7 nTPM
GTEx:974.7 nTPM
FANTOM5:252.6 Scaled Tags Per Million
Pig:133.3 nTPM
Mouse:1131.0 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

974.7
GTEx sample id Sample description nTPM
Retina
Average nTPM: 974.7
Samples: 105

Max nTPM: 1486.0
Min nTPM: 411.2
Std nTPM: 210.0
Median nTPM:
218_1 71 years, female 1486.0
321_1 62 years, female 1333.5
447_1 81 years, male 1317.5
379_1 60 years, male 1290.3
386_1 76 years, male 1273.1
377_1 82 years, female 1272.5
347_1 72 years, male 1269.0
237_1 82 years, male 1264.9
452_1 88 years, female 1253.9
389_1 86 years, female 1245.2
375_1 74 years, female 1227.8
394_1 75 years, female 1221.9
246_1 77 years, male 1208.6
384_1 83 years, male 1200.7
322_1 76 years, male 1198.0
319_1 81 years, male 1193.5
173_1 67 years, male 1182.2
41_1 94 years, female 1160.5
376_1 75 years, female 1154.8
177_1 74 years, male 1151.6
189_1 76 years, male 1148.5
243_1 75 years, male 1144.8
354_1 81 years, female 1144.1
6_1 73 years, female 1121.9
153_1 70 years, female 1121.9
349_1 83 years, male 1117.5
120_1 70 years, female 1111.8
396_1 62 years, male 1111.2
172_1 72 years, female 1110.1
4_1 88 years, female 1108.8
355_1 70 years, female 1107.2
351_1 91 years, male 1100.5
163_1 78 years, male 1095.6
317_1 60 years, male 1092.9
17_1 71 years, male 1092.5
352_1 62 years, male 1089.9
145_1 84 years, male 1084.0
404_1 82 years, female 1071.0
35_1 74 years, female 1069.7
320_1 89 years, female 1068.4
295_1 61 years, female 1054.0
2_1 77 years, female 1048.1
353_1 82 years, female 1047.3
229_1 69 years, female 1032.8
316_1 62 years, male 1029.3
217_1 76 years, male 1028.7
335_1 73 years, female 1023.0
405_1 91 years, male 1014.3
406_1 79 years, male 1011.7
99_1 64 years, male 998.6
137_1 83 years, male 996.3
265_1 87 years, male 996.2
503_1 68 years, male 992.1
526_1 61 years, male 983.7
350_1 84 years, female 982.4
356_1 87 years, female 977.4
425_1 59 years, female 973.2
307_1 66 years, female 969.0
251_1 78 years, male 965.2
266_1 85 years, male 958.5
308_1 70 years, female 953.0
254_1 77 years, female 941.6
264_1 73 years, female 941.1
292_1 71 years, male 940.8
126_1 63 years, male 937.9
318_1 68 years, male 933.7
291_1 76 years, male 929.9
315_1 62 years, female 911.2
286_1 68 years, female 907.8
313_1 79 years, female 906.9
18_1 88 years, male 899.8
293_1 68 years, female 894.5
311_1 78 years, male 884.4
506_1 65 years, male 881.4
480_1 63 years, male 879.0
518_1 75 years, female 876.6
468_1 89 years, male 876.1
324_1 76 years, male 853.2
314_1 67 years, male 848.4
115_1 83 years, male 846.8
109_1 81 years, female 834.2
499_1 55 years, female 831.9
517_1 88 years, male 826.5
162_1 79 years, female 820.4
119_1 70 years, female 820.1
348_1 84 years, male 815.5
288_1 66 years, female 812.8
42_1 85 years, male 790.4
117_1 61 years, male 781.4
139_1 64 years, female 779.6
414_1 84 years, female 766.8
142_1 61 years, female 762.5
495_1 57 years, female 736.9
415_1 77 years, female 731.9
9_1 66 years, female 708.1
81_1 67 years, male 697.2
89_1 63 years, male 628.1
32_1 67 years, male 619.6
501_1 88 years, male 618.7
466_1 57 years, female 569.5
43_1 64 years, female 482.3
413_1 59 years, female 470.5
490_1 67 years, female 459.2
491_1 89 years, female 422.9
149_1 88 years, male 411.2
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

252.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 252.6
FF:10030-101E3 24-65 years, mixed 252.6

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

133.3
Pig sample Sample description nTPM
Retina
nTPM: 133.3
Samples: 4

Max nTPM: 167.2
Min nTPM: 115.0
Sample A Female 123.8
Sample B Female 127.3
Sample C Male 167.2
Sample D Male 115.0

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1131.0
Mouse sample Sample description nTPM
Retina
nTPM: 1131.0
Samples: 4

Max nTPM: 1239.0
Min nTPM: 1015.6
Sample A Male 1145.8
Sample B Male 1015.6
Sample C Female 1239.0
Sample D Female 1123.4

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