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RPS11
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:2289.1 nTPM
HPA:1620.0 nTPM
GTEx:2289.1 nTPM
FANTOM5:269.9 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA049719
Glandular cells High


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1620.0
overview
Male, age 65
Small intestine sample 232
nTPM: 1967.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 1615.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 1483.9
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 1413.2

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2289.1
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 2289.1
Samples: 187

Max nTPM: 5041.2
Min nTPM: 1095.3
Std nTPM: 739.5
Median nTPM: 2097.1
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 5041.2
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 4428.4
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 4408.4
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 4313.1
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 4174.0
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 4090.7
GTEX-183FY-1626-SM-793D8 20-29 years, male 4015.3
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 3976.4
GTEX-14PK6-1626-SM-6871I 70-79 years, female 3803.2
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 3792.1
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 3714.6
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 3701.6
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 3619.2
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 3510.4
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 3500.0
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 3466.3
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 3448.2
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 3366.1
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 3350.7
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 3297.0
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 3247.0
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 3234.4
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 3232.8
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 3229.9
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 3228.9
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 3226.0
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 3174.3
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 3137.3
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 3093.8
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 3075.1
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 3045.2
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 3040.0
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 3037.1
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 2988.0
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 2983.7
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 2936.9
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 2815.4
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 2785.8
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 2773.3
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 2765.2
GTEX-1C475-1426-SM-793CH 40-49 years, female 2713.5
GTEX-13O61-1326-SM-5KM31 60-69 years, male 2703.5
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 2694.6
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 2678.8
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 2656.0
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 2644.6
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 2629.3
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 2612.2
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2608.1
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 2598.0
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 2588.4
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 2583.2
GTEX-1192X-2526-SM-59868 50-59 years, male 2582.3
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 2570.2
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 2570.2
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 2568.7
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 2516.1
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 2496.2
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 2471.2
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 2464.5
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 2462.6
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 2440.6
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 2438.8
GTEX-117YX-0326-SM-5GICL 50-59 years, male 2433.2
GTEX-14PKU-1626-SM-6871C 40-49 years, female 2409.2
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 2404.5
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 2394.4
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 2390.2
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 2377.5
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 2365.1
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 2345.6
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 2342.4
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 2338.0
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 2335.7
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 2318.7
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 2291.0
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 2272.8
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 2272.3
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 2263.2
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 2254.0
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 2250.7
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 2242.4
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 2227.1
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 2221.9
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 2212.7
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 2161.9
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 2161.3
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 2152.7
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 2150.8
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 2133.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 2125.5
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 2107.6
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 2099.4
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 2097.1
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 2092.9
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 2080.3
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 2068.8
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 2067.0
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 2065.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 2057.4
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 2038.9
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 2030.6
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 2023.4
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 2022.4
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 2017.0
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 2008.8
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 2000.6
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1996.3
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1990.5
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1983.0
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1980.1
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1960.8
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1958.0
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1955.9
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1953.4
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1947.8
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1930.6
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1929.6
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1926.9
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1910.9
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1897.8
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1889.7
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1872.0
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1861.6
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1860.7
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1850.8
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1848.6
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1839.8
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1829.9
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1825.9
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1823.5
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1820.5
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1813.3
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1808.8
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1808.0
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1805.4
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1790.5
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1789.7
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1772.6
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1754.4
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1749.2
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1737.0
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1733.9
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1721.3
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1718.3
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1717.6
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1708.7
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1704.0
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1703.7
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1696.9
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1670.4
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1668.5
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1667.7
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1659.6
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1658.2
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1656.8
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1654.4
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1652.5
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1644.6
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1640.6
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1639.5
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1631.0
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1614.8
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 1593.5
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1566.8
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1553.6
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1552.4
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1508.0
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1503.5
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1501.8
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1469.3
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 1444.5
GTEX-111YS-1426-SM-5GID8 60-69 years, male 1439.0
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1437.7
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1418.5
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 1400.5
GTEX-1122O-1326-SM-5H11F 60-69 years, female 1390.8
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1384.2
GTEX-14PN3-2026-SM-68729 60-69 years, female 1340.4
GTEX-YFCO-1326-SM-664NV 40-49 years, male 1325.9
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 1317.7
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1274.9
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 1260.1
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 1226.6
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 1219.0
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 1111.4
GTEX-ZTSS-0926-SM-59865 40-49 years, male 1095.3
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

269.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 269.9
FF:10024-101D6 15,40,85 years, mixed 269.9

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