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RPL13A
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  • RPL13A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:867.1 nTPM
FANTOM5:118.1 Scaled Tags Per Million
Pig:6.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA038751
Glial cells Medium
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

867.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 867.1
Samples: 246

Max nTPM: 1817.0
Min nTPM: 328.8
Std nTPM: 229.2
Median nTPM: 834.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1817.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1707.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1628.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1568.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1498.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1474.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1453.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1431.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1357.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1324.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1322.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1317.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1296.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1289.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1272.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1258.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1258.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1185.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1177.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1176.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1147.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1135.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1135.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1133.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1124.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1117.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1088.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1082.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1080.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1073.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1072.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1070.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1067.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1066.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1065.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1065.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1063.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1062.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1062.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1061.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1060.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1060.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1055.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1047.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1045.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1045.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1040.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1037.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1037.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1032.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1021.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1019.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1017.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1016.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1015.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1010.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1009.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1008.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1001.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 999.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 994.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 990.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 985.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 979.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 979.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 977.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 977.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 974.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 973.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 972.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 970.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 969.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 964.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 963.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 959.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 959.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 957.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 957.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 956.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 954.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 953.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 950.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 947.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 946.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 945.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 943.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 931.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 929.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 929.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 928.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 922.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 919.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 912.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 909.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 907.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 906.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 902.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 902.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 901.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 894.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 891.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 890.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 890.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 884.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 882.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 882.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 877.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 873.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 865.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 865.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 865.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 856.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 852.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 849.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 848.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 848.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 845.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 843.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 838.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 838.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 834.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 834.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 834.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 833.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 833.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 831.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 831.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 829.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 826.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 825.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 823.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 822.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 822.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 821.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 821.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 821.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 821.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 820.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 819.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 811.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 808.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 803.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 802.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 802.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 799.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 798.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 792.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 791.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 788.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 786.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 783.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 778.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 778.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 771.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 766.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 766.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 765.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 765.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 762.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 761.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 759.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 758.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 757.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 756.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 746.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 744.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 743.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 742.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 741.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 741.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 740.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 735.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 733.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 731.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 731.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 730.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 729.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 724.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 724.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 723.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 721.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 717.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 714.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 712.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 710.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 710.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 710.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 709.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 708.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 703.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 700.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 697.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 692.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 692.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 688.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 679.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 679.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 676.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 674.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 672.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 670.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 666.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 665.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 659.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 656.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 655.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 653.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 651.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 650.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 649.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 649.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 648.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 648.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 633.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 633.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 630.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 630.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 629.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 629.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 610.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 609.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 606.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 605.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 605.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 599.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 593.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 590.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 589.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 585.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 583.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 580.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 579.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 576.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 576.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 566.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 565.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 562.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 557.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 543.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 526.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 517.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 486.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 381.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 374.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 366.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 328.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

118.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 118.1
FF:10164-103B2 76 years, female 118.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.2
Pig sample Sample description nTPM
Caudate
nTPM: 6.2
Samples: 4

Max nTPM: 7.4
Min nTPM: 5.0
Sample A Female 6.1
Sample B Female 7.4
Sample C Male 6.2
Sample D Male 5.0

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