We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL13A
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RPL13A
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:2295.1 nTPM
GTEx:2295.1 nTPM
FANTOM5:710.7 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA038751
Squamous epithelial cells High


VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2295.1
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 2295.1
Samples: 156

Max nTPM: 5776.7
Min nTPM: 1142.4
Std nTPM: 618.4
Median nTPM: 2231.0
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 5776.7
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 4244.9
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 4084.3
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 3895.9
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 3758.8
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 3745.9
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 3680.7
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 3593.6
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 3448.4
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 3311.7
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 3234.1
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 3222.8
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 3065.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 3045.1
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 2992.0
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 2951.3
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 2934.7
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 2899.3
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 2880.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 2879.1
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 2853.4
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 2841.6
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 2812.0
GTEX-16NPV-2526-SM-6M483 50-59 years, female 2807.0
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 2769.0
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 2753.1
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 2706.7
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 2696.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 2644.6
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 2608.8
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 2604.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 2588.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 2579.8
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 2577.6
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 2576.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 2547.6
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 2542.5
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 2526.1
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 2525.2
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 2523.9
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 2520.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 2516.4
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 2494.8
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 2471.4
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 2465.1
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 2455.5
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 2440.3
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 2433.4
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 2414.3
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 2406.7
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 2401.9
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 2399.4
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 2397.6
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 2394.0
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 2393.9
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 2391.4
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 2386.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 2364.1
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 2363.3
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 2358.5
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 2350.5
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 2328.2
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 2311.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 2309.7
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 2304.0
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 2297.4
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 2294.9
GTEX-11I78-2026-SM-5987C 50-59 years, female 2294.2
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 2277.7
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 2277.4
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 2276.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 2272.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 2271.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 2269.9
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 2269.8
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 2264.7
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 2247.7
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 2233.0
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 2229.1
GTEX-14PKU-1326-SM-6871B 40-49 years, female 2227.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 2204.7
GTEX-S341-1226-SM-4AD5S 40-49 years, female 2201.1
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 2200.4
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 2184.2
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 2169.7
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 2163.6
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 2149.5
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 2148.3
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 2121.8
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 2120.1
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 2108.7
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 2108.5
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 2106.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 2102.4
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 2082.7
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 2082.1
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 2076.7
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 2060.6
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 2058.7
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 2038.9
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 2036.9
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 2034.0
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 2031.8
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 2030.7
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 2027.6
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 2019.0
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 2015.3
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 2015.1
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 1997.5
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1988.0
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1977.3
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 1966.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 1946.3
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 1933.9
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 1929.3
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 1926.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 1916.9
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 1915.6
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 1895.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 1884.8
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 1878.3
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 1870.5
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1861.4
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 1860.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1856.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 1842.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 1836.0
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 1827.0
GTEX-1C475-0526-SM-793AC 40-49 years, female 1824.5
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 1816.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1782.4
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1782.1
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1772.6
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1767.8
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1766.1
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 1756.1
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 1721.7
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1694.7
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 1668.9
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 1660.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1642.3
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1639.5
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 1585.3
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 1580.7
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 1576.9
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 1507.8
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 1497.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1495.0
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 1464.9
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 1450.3
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 1448.2
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 1423.6
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 1375.3
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 1355.6
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 1216.7
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 1142.4
Show allShow less

VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

710.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 710.7
FF:10204-103F6 68 years, female 710.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org