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RPL13A
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  • RPL13A
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1911.4 nTPM
HPA:1425.0 nTPM
GTEx:1911.4 nTPM
FANTOM5:272.7 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA038751
Glandular cells Medium



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1425.0
overview
Male, age 65
Small intestine sample 232
nTPM: 1943.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 1300.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 1223.1
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 1232.4

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1911.4
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1911.4
Samples: 187

Max nTPM: 3696.2
Min nTPM: 1012.9
Std nTPM: 553.2
Median nTPM: 1754.6
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 3696.2
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 3670.4
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 3432.1
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 3263.1
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 3236.4
GTEX-14PK6-1626-SM-6871I 70-79 years, female 3214.1
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 3142.1
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 3092.8
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 3056.7
GTEX-183FY-1626-SM-793D8 20-29 years, male 3037.1
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 2972.5
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2948.1
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 2947.6
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 2831.9
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 2787.8
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2740.8
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 2732.7
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 2714.2
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 2699.2
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 2644.4
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 2605.9
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 2603.4
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 2588.8
GTEX-13O61-1326-SM-5KM31 60-69 years, male 2566.0
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2561.6
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 2548.2
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2535.8
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 2519.9
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2517.5
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 2509.5
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 2503.2
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 2467.7
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2435.9
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 2428.9
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 2424.5
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 2411.9
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 2402.0
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 2393.2
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 2379.0
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 2363.2
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2345.5
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 2345.1
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 2337.8
GTEX-1C475-1426-SM-793CH 40-49 years, female 2327.5
GTEX-14PKU-1626-SM-6871C 40-49 years, female 2282.2
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 2281.8
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 2280.5
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 2253.9
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 2240.1
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 2216.6
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 2214.0
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 2195.7
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 2183.7
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 2179.3
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 2164.8
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 2139.6
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 2137.4
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 2126.9
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 2124.4
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 2115.0
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 2091.8
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 2068.6
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 2067.1
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 2058.5
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 2054.1
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2026.8
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 2008.0
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 2001.5
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1970.4
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1970.1
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1962.3
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1954.9
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1943.8
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1938.0
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1933.3
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1929.9
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1927.3
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1912.4
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1910.9
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1899.0
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1890.0
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1841.8
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1834.9
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1827.7
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1826.4
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1818.2
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1811.8
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1803.4
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1802.6
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1790.5
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1786.6
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1774.3
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1763.3
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1754.6
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1747.6
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1747.5
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1735.9
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1734.4
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1733.4
GTEX-1192X-2526-SM-59868 50-59 years, male 1732.9
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1714.9
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1714.3
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1713.9
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1698.1
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1695.5
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1694.8
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1681.9
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1680.0
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1679.1
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1676.9
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1676.8
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1673.9
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1652.6
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1641.9
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1639.7
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1633.7
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1627.6
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1624.5
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1623.6
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1622.9
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1620.0
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1618.2
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1615.5
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1615.2
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1614.1
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1613.0
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1610.3
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1601.1
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1591.3
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1572.0
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1566.1
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1562.1
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1541.3
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1538.1
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1536.4
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1534.6
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1534.2
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1524.4
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1521.5
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1516.1
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1512.0
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1509.0
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1493.9
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1492.8
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1465.4
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1453.0
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1452.5
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1438.6
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1436.5
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 1430.8
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1411.3
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1396.2
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1388.8
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1386.1
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1381.1
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 1379.3
GTEX-111YS-1426-SM-5GID8 60-69 years, male 1369.4
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1361.7
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 1356.7
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1355.3
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1347.7
GTEX-14PN3-2026-SM-68729 60-69 years, female 1344.0
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1339.7
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1335.3
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1331.3
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1320.7
GTEX-1122O-1326-SM-5H11F 60-69 years, female 1305.7
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1298.6
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1294.6
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1294.5
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1287.4
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 1278.2
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1275.1
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1269.4
GTEX-YFCO-1326-SM-664NV 40-49 years, male 1255.5
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1231.8
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 1228.3
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1218.9
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1203.6
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 1201.9
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1193.5
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1191.8
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 1184.2
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1148.2
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 1133.2
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1118.4
GTEX-ZTSS-0926-SM-59865 40-49 years, male 1012.9
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

272.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 272.7
FF:10024-101D6 15,40,85 years, mixed 272.7

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