We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SH3BGRL3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • SH3BGRL3
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:140.5 nTPM
HPA Brain:160.7 nTPM
GTEx:140.5 nTPM
FANTOM5:366.6 Scaled Tags Per Million
Pig:518.3 nTPM
Mouse:377.5 nTPM
Allen mouse:7.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA030848
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

160.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 149.9
2846 Female, age 79, unknown 193.2
2481 Female, age 94, left hemisphere 163.9
2290 Female, age 72, unknown 152.1
2288 Male, age 75, left hemisphere 149.6
2289 Male, age 61, right hemisphere 144.9
1781 Male, age 74, unknown 141.3
1857 Female, age 85, left hemisphere 134.5
1854 Male, age 80, left hemisphere 119.4
Globus pallidus, externus
nTPM: 134.8
2395 Male, age 75, both hemispheres 171.5
1996 Male, age 80, right hemisphere 156.2
2772 Female, age 79, unknown 147.0
2646 Male, age 61, right hemisphere 109.2
2567 Female, age 72, unknown 89.9
Globus pallidus, internus
nTPM: 142.5
2111 Female, age 85, right hemisphere 158.6
2287 Male, age 75, right hemisphere 154.1
1818 Male, age 74, unknown 144.2
2037 Male, age 80, right hemisphere 144.0
2483 Female, age 94, right hemisphere 139.9
2778 Female, age 91, both hemispheres 137.4
2566 Female, age 72, unknown 119.1
Nucleus accumbens
nTPM: 120.6
2698 Female, age 72, unknown 148.0
2286 Male, age 75, left hemisphere 144.7
2391 Female, age 94, left hemisphere 124.7
2732 Male, age 80, right hemisphere 116.9
1856 Female, age 91, right hemisphere 115.9
1806 Female, age 85, left hemisphere 115.0
1783 Male, age 74, unknown 109.7
2824 Male, age 61, right hemisphere 90.0
Nucleus basalis of Meynert
nTPM: 132.2
2821 Male, age 75, both hemispheres 157.8
2484 Female, age 94, left hemisphere 142.7
2393 Male, age 80, right hemisphere 117.8
2569 Male, age 61, both hemispheres 110.4
Nucleus of the diagonal band
nTPM: 152.3
2195 Female, age 85, both hemispheres 200.1
1812 Female, age 91, both hemispheres 169.5
2775 Male, age 80, right hemisphere 163.3
1979 Male, age 74, unknown 117.1
2029 Male, age 61, right hemisphere 111.6
Putamen
nTPM: 141.2
2466 Female, age 79, unknown 180.6
1829 Male, age 74, unknown 165.9
2482 Female, age 94, left hemisphere 156.8
2489 Female, age 72, unknown 140.9
1937 Female, age 91, right hemisphere 121.0
2647 Male, age 75, left hemisphere 116.6
1838 Male, age 80, right hemisphere 106.5
Septal nuclei
nTPM: 160.7
1960 Male, age 74, unknown 239.0
2629 Female, age 94, right hemisphere 161.3
2059 Female, age 85, both hemispheres 160.9
2031 Female, age 72, unknown 155.4
2009 Female, age 91, both hemispheres 139.3
2199 Male, age 80, right hemisphere 137.3
2394 Male, age 61, left hemisphere 131.9
Stria terminalis, bed nucleus
nTPM: 135.6
1974 Female, age 91, both hemispheres 169.7
2486 Female, age 94, both hemispheres 127.9
2201 Male, age 74, unknown 109.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 122.9
Samples: 246

Max nTPM: 292.3
Min nTPM: 49.7
Std nTPM: 30.9
Median nTPM: 120.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 292.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 211.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 209.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 209.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 200.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 198.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 196.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 193.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 189.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 186.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 183.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 179.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 178.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 175.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 170.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 168.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 167.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 167.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 167.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 165.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 164.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 162.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 160.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 160.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 159.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 159.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 159.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 157.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 157.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 156.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 155.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 153.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 152.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 151.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 151.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 150.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 149.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 149.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 149.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 149.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 149.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 149.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 148.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 147.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 147.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 147.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 146.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 146.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 145.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 144.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 143.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 143.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 143.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 142.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 142.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 142.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 141.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 140.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 139.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 139.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 138.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 138.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 137.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 137.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 137.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 137.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 136.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 136.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 136.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 135.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 134.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 134.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 133.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 133.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 133.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 133.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 133.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 133.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 132.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 132.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 131.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 130.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 130.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 130.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 130.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 129.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 129.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 129.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 129.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 128.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 128.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 127.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 127.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 127.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 127.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 126.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 126.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 126.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 126.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 125.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 125.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 125.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 125.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 124.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 124.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 124.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 124.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 123.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 123.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 122.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 122.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 122.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 122.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 122.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 121.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 121.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 121.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 121.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 121.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 121.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 120.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 120.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 120.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 120.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 120.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 119.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 119.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 119.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 118.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 118.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 118.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 118.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 118.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 118.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 118.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 117.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 117.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 116.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 116.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 116.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 116.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 116.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 115.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 115.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 115.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 115.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 114.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 114.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 113.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 113.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 113.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 112.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 112.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 112.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 112.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 112.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 112.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 112.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 111.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 111.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 111.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 110.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 110.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 110.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 109.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 109.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 109.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 109.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 108.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 108.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 107.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 107.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 107.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 107.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 106.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 106.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 106.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 106.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 105.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 104.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 104.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 104.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 104.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 103.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 103.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 103.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 102.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 102.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 101.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 101.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 101.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 101.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 101.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 101.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 100.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 100.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 99.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 99.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 98.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 98.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 98.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 95.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 95.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 95.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 95.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 94.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 94.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 94.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 94.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 94.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 94.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 93.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 93.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 92.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 91.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 91.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 90.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 90.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 90.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 89.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 89.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 89.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 89.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 88.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 86.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 86.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 85.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 85.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 83.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 82.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 82.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 79.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 78.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 74.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 74.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 73.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 71.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 71.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 71.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 70.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 69.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 62.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 62.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 61.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 60.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 49.7
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 102.6
Samples: 246

Max nTPM: 240.4
Min nTPM: 30.8
Std nTPM: 29.8
Median nTPM: 98.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 240.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 215.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 215.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 202.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 181.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 178.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 169.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 169.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 160.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 158.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 154.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 149.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 147.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 146.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 146.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 144.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 142.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 140.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 140.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 140.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 139.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 139.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 138.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 137.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 136.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 135.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 135.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 135.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 133.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 133.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 133.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 133.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 131.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 130.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 130.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 130.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 129.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 129.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 128.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 127.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 127.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 127.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 127.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 127.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 126.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 126.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 126.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 125.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 125.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 124.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 124.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 123.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 123.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 122.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 122.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 122.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 122.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 121.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 121.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 121.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 120.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 120.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 120.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 119.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 119.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 119.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 119.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 118.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 118.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 118.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 117.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 117.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 117.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 117.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 117.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 117.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 115.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 115.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 113.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 112.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 112.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 111.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 111.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 111.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 111.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 111.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 109.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 109.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 109.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 108.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 108.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 108.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 108.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 108.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 108.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 107.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 107.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 106.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 106.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 106.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 106.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 106.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 106.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 106.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 106.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 105.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 105.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 105.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 104.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 104.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 104.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 103.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 102.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 102.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 102.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 101.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 101.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 101.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 101.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 100.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 99.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 99.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 98.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 98.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 97.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 97.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 97.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 97.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 96.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 96.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 96.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 96.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 95.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 95.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 95.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 95.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 95.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 94.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 93.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 93.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 92.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 92.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 92.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 92.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 91.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 91.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 91.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 91.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 91.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 91.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 90.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 90.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 90.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 89.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 89.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 89.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 89.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 89.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 89.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 88.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 88.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 88.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 88.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 87.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 87.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 87.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 87.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 87.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 87.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 86.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 85.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 85.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 85.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 84.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 84.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 83.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 83.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 83.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 83.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 82.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 82.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 82.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 82.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 81.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 80.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 80.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 80.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 80.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 79.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 79.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 79.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 79.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 78.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 78.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 78.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 78.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 77.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 77.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 77.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 76.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 76.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 76.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 75.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 75.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 75.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 74.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 74.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 73.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 73.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 73.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 73.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 72.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 72.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 72.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 71.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 71.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 71.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 71.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 71.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 70.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 68.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 68.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 68.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 68.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 68.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 67.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 67.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 67.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 66.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 65.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 64.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 64.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 64.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 63.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 63.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 63.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 63.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 61.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 60.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 59.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 57.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 52.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 51.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 51.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 39.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 30.8
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 140.5
Samples: 205

Max nTPM: 282.4
Min nTPM: 33.7
Std nTPM: 33.6
Median nTPM: 140.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 282.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 238.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 218.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 218.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 212.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 204.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 201.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 200.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 194.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 191.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 190.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 190.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 189.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 188.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 187.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 186.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 185.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 182.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 182.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 182.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 180.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 179.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 177.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 176.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 175.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 174.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 173.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 173.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 172.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 172.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 172.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 170.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 170.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 170.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 170.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 169.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 168.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 167.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 167.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 166.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 166.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 165.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 165.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 165.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 164.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 163.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 162.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 161.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 160.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 160.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 160.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 160.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 159.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 159.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 159.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 158.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 157.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 156.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 156.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 156.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 156.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 156.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 156.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 155.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 154.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 154.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 153.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 153.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 153.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 153.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 152.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 152.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 152.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 152.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 151.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 151.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 151.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 150.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 149.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 149.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 149.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 149.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 148.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 148.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 148.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 147.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 147.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 147.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 145.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 145.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 145.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 144.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 144.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 144.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 144.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 143.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 143.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 143.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 143.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 143.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 142.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 141.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 140.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 140.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 140.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 140.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 139.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 139.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 139.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 139.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 139.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 138.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 138.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 137.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 137.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 137.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 137.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 136.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 136.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 135.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 135.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 134.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 134.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 133.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 133.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 132.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 132.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 131.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 131.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 131.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 130.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 129.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 129.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 129.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 128.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 128.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 128.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 127.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 127.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 127.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 125.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 125.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 124.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 124.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 123.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 123.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 123.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 123.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 123.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 122.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 122.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 120.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 119.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 119.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 118.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 118.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 117.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 117.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 116.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 115.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 115.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 115.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 114.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 113.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 112.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 112.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 112.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 112.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 111.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 111.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 109.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 108.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 108.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 108.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 107.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 106.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 105.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 105.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 104.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 103.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 102.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 100.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 100.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 99.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 97.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 97.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 96.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 92.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 91.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 89.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 89.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 89.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 88.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 88.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 87.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 86.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 82.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 81.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 79.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 76.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 75.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 64.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 58.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 58.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 33.7
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

366.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 251.3
FF:10164-103B2 76 years, female 251.3
Nucleus accumbens
Scaled Tags Per Million: 366.6
FF:10037-101F1 23-56 years, mixed 366.6
Putamen
Scaled Tags Per Million: 287.8
FF:10176-103C5 60 years, female 287.8
Globus pallidus
Scaled Tags Per Million: 261.0
FF:10161-103A8 76 years, female 296.0
FF:10175-103C4 60 years, female 226.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

518.3
Pig sample Sample description nTPM
Caudate
nTPM: 340.0
Samples: 4

Max nTPM: 450.3
Min nTPM: 264.3
Sample A Female 264.3
Sample B Female 290.0
Sample C Male 450.3
Sample D Male 355.2
Putamen
nTPM: 518.4
Samples: 4

Max nTPM: 637.7
Min nTPM: 331.9
Sample A Female 599.8
Sample B Female 331.9
Sample C Male 504.0
Sample D Male 637.7
Septum
nTPM: 291.1
Samples: 4

Max nTPM: 338.0
Min nTPM: 219.7
Sample A Female 333.8
Sample B Female 273.0
Sample C Male 219.7
Sample D Male 338.0
Ventral pallidum
nTPM: 372.5
Samples: 4

Max nTPM: 481.6
Min nTPM: 315.8
Sample A Female 342.5
Sample B Female 349.9
Sample C Male 315.8
Sample D Male 481.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

377.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 377.5
Samples: 4

Max nTPM: 407.8
Min nTPM: 334.9
Sample A Male 385.7
Sample B Male 407.8
Sample C Female 334.9
Sample D Female 381.5
Septum
nTPM: 263.5
Samples: 4

Max nTPM: 278.9
Min nTPM: 242.6
Sample A Male 258.3
Sample B Male 278.9
Sample C Female 274.2
Sample D Female 242.6
Ventral forebrain
nTPM: 282.0
Samples: 4

Max nTPM: 343.9
Min nTPM: 253.2
Sample A Male 262.9
Sample B Male 253.2
Sample C Female 343.9
Sample D Female 267.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.1
69873708 Antisense, RP_050512_01_G10, Mouse strain C57BL/6J (56 days, male) 7.1
Pallidum
Expression energy: 3.4
69873708 Antisense, RP_050512_01_G10, Mouse strain C57BL/6J (56 days, male) 3.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org