We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL11
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RPL11
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:752.3 nTPM
FANTOM5:76.8 Scaled Tags Per Million
Pig:411.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002734
Glial cells Low
Neuronal cells Medium


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

752.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 752.3
Samples: 246

Max nTPM: 1717.9
Min nTPM: 351.2
Std nTPM: 208.8
Median nTPM: 709.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1717.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1633.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1488.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1391.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1296.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1288.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1265.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1224.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1207.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1192.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1189.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1178.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1161.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1121.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1110.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1088.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1081.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1073.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1064.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1056.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1045.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1044.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1026.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1016.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1009.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 998.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 998.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 996.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 988.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 978.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 978.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 967.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 966.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 966.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 965.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 964.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 962.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 962.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 957.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 953.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 932.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 931.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 922.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 919.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 918.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 914.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 912.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 908.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 907.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 895.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 895.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 892.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 891.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 887.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 872.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 870.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 868.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 867.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 864.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 863.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 854.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 849.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 849.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 846.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 844.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 842.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 839.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 837.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 837.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 830.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 826.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 821.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 820.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 819.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 818.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 814.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 809.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 807.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 806.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 804.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 803.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 801.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 794.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 794.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 793.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 788.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 785.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 783.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 782.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 782.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 781.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 778.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 773.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 772.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 760.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 759.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 757.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 755.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 754.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 751.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 748.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 747.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 747.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 746.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 745.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 744.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 737.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 737.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 736.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 736.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 732.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 731.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 729.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 728.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 727.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 726.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 725.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 723.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 716.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 715.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 715.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 711.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 711.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 707.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 704.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 700.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 698.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 698.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 697.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 697.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 693.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 692.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 690.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 687.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 687.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 684.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 683.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 682.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 681.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 678.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 675.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 674.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 672.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 670.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 666.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 665.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 664.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 664.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 663.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 663.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 660.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 659.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 659.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 658.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 656.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 655.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 655.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 655.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 652.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 652.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 650.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 650.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 649.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 649.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 645.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 645.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 644.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 643.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 642.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 641.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 641.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 640.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 635.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 634.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 630.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 629.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 627.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 625.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 622.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 620.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 620.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 619.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 617.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 610.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 608.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 608.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 606.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 604.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 603.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 603.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 600.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 599.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 598.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 592.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 588.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 587.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 587.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 584.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 582.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 579.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 575.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 573.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 569.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 568.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 565.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 565.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 563.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 558.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 557.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 554.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 550.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 549.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 546.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 546.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 545.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 543.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 542.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 541.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 538.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 534.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 534.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 531.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 530.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 519.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 518.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 515.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 515.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 515.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 514.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 514.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 513.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 510.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 499.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 493.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 486.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 485.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 485.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 481.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 472.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 467.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 466.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 453.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 452.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 450.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 436.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 351.2
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

76.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 76.8
FF:10164-103B2 76 years, female 76.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

411.4
Pig sample Sample description nTPM
Caudate
nTPM: 411.4
Samples: 4

Max nTPM: 464.2
Min nTPM: 368.6
Sample A Female 411.2
Sample B Female 401.6
Sample C Male 464.2
Sample D Male 368.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org