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TISSUE KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Kidney
Tissue proteome
Kidney
KIDNEY - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1120.9 nTPM
HPA:618.9 nTPM
GTEx:1120.9 nTPM
FANTOM5:14.1 Scaled Tags Per Million

KIDNEY - Annotated protein expression
Pending normal tissue analysis

KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

618.9
overview
Female, age 58
Kidney sample 55
nTPM: 699
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 695.8
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 607.6
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 699.8
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 424.6
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 514.2
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 1112.7
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 416.7
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 399.5
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1120.9
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 1120.9
Samples: 85

Max nTPM: 2679.3
Min nTPM: 521.4
Std nTPM: 353.8
Median nTPM: 1036.9
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 2679.3
GTEX-NPJ8-2226-SM-3TW8D 40-49 years, male 1987.7
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 1893.3
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 1809.4
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 1765.0
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 1643.6
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 1640.0
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 1610.0
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 1574.2
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 1563.8
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 1553.0
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 1524.5
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 1516.7
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 1428.3
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 1390.0
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 1383.3
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 1378.9
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 1378.6
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 1375.3
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 1337.7
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 1334.9
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 1327.5
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 1307.9
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 1288.5
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 1258.7
GTEX-O5YV-1226-SM-EV795 60-69 years, female 1221.5
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 1206.0
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 1191.9
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 1186.7
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 1177.1
GTEX-QDVN-1626-SM-48TZC 50-59 years, male 1172.3
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 1170.8
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 1161.8
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 1147.8
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 1133.9
GTEX-13112-2126-SM-5GCO4 50-59 years, male 1130.0
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 1113.0
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 1105.9
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 1086.2
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 1085.2
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 1056.6
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 1042.9
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 1036.9
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 1035.8
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 1024.3
GTEX-14C39-2126-SM-664OH 40-49 years, male 1018.1
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 1014.0
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 1012.9
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 1004.5
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 998.9
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 994.3
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 967.8
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 951.2
GTEX-RN64-1626-SM-48FD7 50-59 years, male 930.3
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 925.3
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 924.7
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 914.1
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 909.1
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 908.2
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 907.8
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 905.7
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 895.2
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 895.1
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 891.1
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 885.7
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 861.9
GTEX-12696-0926-SM-5FQTV 60-69 years, male 853.5
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 818.8
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 818.7
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 814.9
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 805.6
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 791.1
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 779.6
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 767.4
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 767.0
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 762.3
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 754.3
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 745.5
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 736.6
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 701.4
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 694.7
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 684.7
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 659.4
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 648.6
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 521.4
Show allShow less
Kidney - Medulla
Average nTPM: 1074.7
Samples: 4

Max nTPM: 1469.0
Min nTPM: 711.3
Std nTPM: 286.7
Median nTPM: 1059.2
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 1469.0
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 1202.2
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 916.1
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 711.3

KIDNEY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

14.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Kidney
Scaled Tags Per Million: 14.1
FF:10017-101C8 60,62,63 years, female 14.1

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