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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1000.5 nTPM
HPA Brain:529.8 nTPM
GTEx:1000.5 nTPM
FANTOM5:3.4 Scaled Tags Per Million
Pig:431.6 nTPM
Mouse:664.7 nTPM
Allen mouse:18.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA058373
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

529.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 436.1
2846 Female, age 79, unknown 538.1
1857 Female, age 85, left hemisphere 510.6
2290 Female, age 72, unknown 474.3
1854 Male, age 80, left hemisphere 461.0
2481 Female, age 94, left hemisphere 410.0
1781 Male, age 74, unknown 399.3
2288 Male, age 75, left hemisphere 364.2
2289 Male, age 61, right hemisphere 331.5
Globus pallidus, externus
nTPM: 504.8
1996 Male, age 80, right hemisphere 625.1
2395 Male, age 75, both hemispheres 574.2
2772 Female, age 79, unknown 519.9
2567 Female, age 72, unknown 428.6
2646 Male, age 61, right hemisphere 376.0
Globus pallidus, internus
nTPM: 529.8
2483 Female, age 94, right hemisphere 689.5
2287 Male, age 75, right hemisphere 636.3
2037 Male, age 80, right hemisphere 558.6
2778 Female, age 91, both hemispheres 485.0
1818 Male, age 74, unknown 465.0
2566 Female, age 72, unknown 460.5
2111 Female, age 85, right hemisphere 413.5
Nucleus accumbens
nTPM: 457.7
2698 Female, age 72, unknown 575.3
1856 Female, age 91, right hemisphere 524.4
1783 Male, age 74, unknown 491.1
1806 Female, age 85, left hemisphere 479.1
2391 Female, age 94, left hemisphere 429.7
2732 Male, age 80, right hemisphere 401.5
2824 Male, age 61, right hemisphere 393.7
2286 Male, age 75, left hemisphere 367.1
Nucleus basalis of Meynert
nTPM: 441.1
2393 Male, age 80, right hemisphere 466.8
2821 Male, age 75, both hemispheres 465.9
2569 Male, age 61, both hemispheres 416.3
2484 Female, age 94, left hemisphere 415.2
Nucleus of the diagonal band
nTPM: 372.8
1812 Female, age 91, both hemispheres 443.6
2775 Male, age 80, right hemisphere 398.8
2029 Male, age 61, right hemisphere 347.9
1979 Male, age 74, unknown 346.2
2195 Female, age 85, both hemispheres 327.7
Putamen
nTPM: 411.7
1838 Male, age 80, right hemisphere 467.1
2466 Female, age 79, unknown 454.4
1937 Female, age 91, right hemisphere 454.1
1829 Male, age 74, unknown 441.8
2482 Female, age 94, left hemisphere 392.9
2647 Male, age 75, left hemisphere 360.6
2489 Female, age 72, unknown 311.0
Septal nuclei
nTPM: 358.6
2031 Female, age 72, unknown 419.0
2199 Male, age 80, right hemisphere 376.5
1960 Male, age 74, unknown 371.8
2009 Female, age 91, both hemispheres 354.0
2394 Male, age 61, left hemisphere 334.8
2059 Female, age 85, both hemispheres 330.4
2629 Female, age 94, right hemisphere 323.7
Stria terminalis, bed nucleus
nTPM: 323.1
1974 Female, age 91, both hemispheres 405.6
2201 Male, age 74, unknown 288.5
2486 Female, age 94, both hemispheres 275.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1000.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 776.9
Samples: 246

Max nTPM: 1644.7
Min nTPM: 426.0
Std nTPM: 196.4
Median nTPM: 750.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1644.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1603.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1543.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1367.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1329.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1304.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1275.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1270.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1251.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1190.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1184.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1181.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1159.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1151.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1147.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1146.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1072.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1059.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1036.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1034.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1034.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1030.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1023.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1016.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1011.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1008.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1007.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 998.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 996.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 992.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 983.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 970.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 968.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 964.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 963.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 953.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 953.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 948.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 948.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 944.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 943.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 939.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 939.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 935.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 933.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 932.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 930.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 918.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 915.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 910.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 906.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 903.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 899.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 889.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 884.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 883.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 871.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 865.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 858.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 858.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 856.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 850.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 850.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 846.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 846.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 844.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 837.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 833.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 830.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 829.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 829.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 828.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 827.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 827.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 826.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 826.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 826.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 825.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 825.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 824.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 822.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 821.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 819.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 817.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 817.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 817.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 810.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 809.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 801.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 801.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 794.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 792.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 790.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 789.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 789.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 783.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 781.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 779.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 779.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 779.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 778.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 777.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 776.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 775.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 775.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 774.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 774.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 767.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 766.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 765.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 765.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 764.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 763.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 761.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 760.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 755.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 754.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 754.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 753.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 753.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 752.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 751.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 751.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 749.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 748.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 747.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 744.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 741.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 741.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 738.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 736.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 736.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 725.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 722.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 719.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 718.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 718.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 715.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 713.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 711.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 710.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 707.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 705.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 704.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 701.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 701.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 701.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 699.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 695.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 693.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 689.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 686.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 686.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 685.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 684.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 684.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 684.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 681.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 681.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 679.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 677.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 676.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 676.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 676.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 675.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 675.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 673.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 672.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 671.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 671.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 671.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 670.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 668.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 668.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 664.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 664.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 663.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 661.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 660.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 660.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 660.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 659.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 657.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 655.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 652.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 650.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 649.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 645.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 643.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 642.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 642.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 642.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 641.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 639.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 635.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 633.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 630.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 624.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 621.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 620.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 608.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 607.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 602.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 600.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 597.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 595.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 594.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 593.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 591.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 591.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 589.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 586.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 584.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 584.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 582.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 582.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 581.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 576.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 576.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 573.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 572.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 571.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 566.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 565.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 564.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 561.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 559.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 558.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 550.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 547.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 547.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 530.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 528.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 527.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 526.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 523.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 521.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 521.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 513.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 509.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 505.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 493.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 487.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 487.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 448.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 426.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 1000.5
Samples: 246

Max nTPM: 3063.2
Min nTPM: 440.6
Std nTPM: 275.5
Median nTPM: 953.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 3063.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 2087.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1918.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1878.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1845.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1810.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1689.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1568.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1567.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1487.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1471.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 1469.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 1437.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 1387.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1383.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1351.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 1339.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1337.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1326.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 1322.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1320.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1309.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1300.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 1300.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1296.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 1294.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1287.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 1282.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1277.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 1276.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1275.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 1255.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 1225.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1219.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 1217.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1216.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 1207.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1182.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1181.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1174.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1172.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 1168.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 1167.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1160.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 1157.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 1148.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1142.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 1140.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1140.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1133.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 1130.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 1130.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 1130.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 1129.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1125.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 1125.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1124.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 1124.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1121.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 1116.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 1112.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 1112.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 1112.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 1107.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1107.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 1106.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 1105.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1104.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 1104.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1100.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1099.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1094.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1092.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1091.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1090.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 1079.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1077.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 1072.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 1071.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 1063.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 1063.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1061.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 1060.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1058.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1055.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 1051.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 1048.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 1047.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 1047.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 1039.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 1035.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 1035.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 1021.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 1020.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 1017.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 1017.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 1016.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 1015.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 1015.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 1010.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1007.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1005.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 1003.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1000.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 1000.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 999.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 995.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 988.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 987.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 977.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 976.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 973.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 972.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 965.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 965.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 964.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 964.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 963.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 959.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 957.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 956.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 954.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 954.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 951.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 949.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 949.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 948.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 943.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 942.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 941.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 941.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 940.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 938.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 937.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 936.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 932.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 931.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 931.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 930.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 930.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 923.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 921.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 918.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 917.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 915.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 914.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 913.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 908.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 907.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 902.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 901.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 897.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 894.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 892.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 891.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 881.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 878.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 878.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 875.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 873.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 870.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 869.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 868.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 863.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 862.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 862.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 861.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 860.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 858.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 858.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 858.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 853.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 849.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 848.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 847.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 847.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 845.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 844.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 842.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 840.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 837.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 837.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 837.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 837.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 836.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 836.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 834.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 834.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 834.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 833.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 832.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 830.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 828.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 827.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 826.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 825.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 823.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 821.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 820.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 817.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 809.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 805.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 791.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 789.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 788.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 782.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 781.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 778.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 777.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 772.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 771.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 768.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 764.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 763.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 762.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 762.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 754.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 753.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 740.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 739.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 739.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 736.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 732.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 730.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 719.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 710.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 709.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 708.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 697.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 696.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 696.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 686.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 674.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 673.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 667.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 667.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 654.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 640.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 635.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 624.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 618.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 616.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 594.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 590.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 514.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 440.6
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Brain - Putamen (basal ganglia)
Average nTPM: 795.8
Samples: 205

Max nTPM: 1487.1
Min nTPM: 403.2
Std nTPM: 201.4
Median nTPM: 771.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1487.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1476.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1449.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1421.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1415.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1389.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1353.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 1319.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1179.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1169.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1136.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1133.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1125.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1093.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 1081.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1077.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1067.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1060.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1055.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1053.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1053.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1048.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1047.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1047.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1042.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 1036.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1031.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 1020.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1019.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1015.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 1008.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 997.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 992.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 976.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 974.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 968.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 968.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 965.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 956.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 929.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 929.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 926.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 922.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 911.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 899.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 899.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 895.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 894.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 892.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 892.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 888.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 886.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 884.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 880.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 879.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 877.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 870.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 869.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 865.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 861.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 848.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 848.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 847.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 844.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 843.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 843.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 842.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 839.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 838.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 838.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 838.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 837.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 830.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 828.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 827.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 825.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 824.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 820.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 819.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 813.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 807.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 806.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 801.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 801.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 801.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 800.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 797.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 797.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 797.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 796.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 796.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 795.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 788.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 787.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 786.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 785.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 780.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 780.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 779.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 777.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 777.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 776.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 771.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 764.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 762.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 761.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 755.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 754.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 753.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 753.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 752.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 751.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 746.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 742.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 741.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 741.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 740.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 739.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 735.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 734.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 729.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 725.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 724.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 723.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 723.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 722.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 722.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 710.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 709.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 705.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 704.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 701.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 700.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 698.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 694.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 690.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 686.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 685.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 684.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 683.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 682.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 679.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 677.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 676.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 675.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 675.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 673.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 671.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 663.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 663.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 657.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 654.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 653.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 653.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 652.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 650.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 645.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 642.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 641.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 640.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 634.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 633.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 632.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 630.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 629.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 629.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 628.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 628.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 626.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 623.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 617.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 609.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 605.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 605.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 605.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 600.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 599.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 593.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 591.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 585.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 583.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 581.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 580.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 580.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 576.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 574.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 573.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 567.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 564.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 557.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 546.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 544.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 542.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 539.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 536.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 528.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 524.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 518.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 510.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 505.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 496.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 494.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 481.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 476.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 403.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

3.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 3.4
FF:10164-103B2 76 years, female 3.4
Nucleus accumbens
Scaled Tags Per Million: 2.1
FF:10037-101F1 23-56 years, mixed 2.1
Putamen
Scaled Tags Per Million: 2.5
FF:10176-103C5 60 years, female 2.5
Globus pallidus
Scaled Tags Per Million: 2.1
FF:10161-103A8 76 years, female 3.5
FF:10175-103C4 60 years, female 0.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

431.6
Pig sample Sample description nTPM
Caudate
nTPM: 316.7
Samples: 4

Max nTPM: 335.8
Min nTPM: 284.9
Sample A Female 335.8
Sample B Female 317.0
Sample C Male 329.0
Sample D Male 284.9
Putamen
nTPM: 431.6
Samples: 4

Max nTPM: 526.5
Min nTPM: 328.1
Sample A Female 526.5
Sample B Female 328.1
Sample C Male 481.9
Sample D Male 389.8
Septum
nTPM: 428.8
Samples: 4

Max nTPM: 544.2
Min nTPM: 330.5
Sample A Female 544.2
Sample B Female 407.9
Sample C Male 432.7
Sample D Male 330.5
Ventral pallidum
nTPM: 388.5
Samples: 4

Max nTPM: 452.4
Min nTPM: 344.3
Sample A Female 344.3
Sample B Female 452.4
Sample C Male 372.9
Sample D Male 384.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

664.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 664.7
Samples: 4

Max nTPM: 696.5
Min nTPM: 645.0
Sample A Male 669.3
Sample B Male 648.0
Sample C Female 645.0
Sample D Female 696.5
Septum
nTPM: 653.6
Samples: 4

Max nTPM: 727.1
Min nTPM: 585.8
Sample A Male 585.8
Sample B Male 727.1
Sample C Female 680.3
Sample D Female 621.0
Ventral forebrain
nTPM: 583.8
Samples: 4

Max nTPM: 672.3
Min nTPM: 534.5
Sample A Male 550.2
Sample B Male 578.3
Sample C Female 672.3
Sample D Female 534.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 18.0
68410596 Antisense, RP_041214_02_C02, Mouse strain C57BL/6J (56 days, male) 18.0
Pallidum
Expression energy: 16.8
68410596 Antisense, RP_041214_02_C02, Mouse strain C57BL/6J (56 days, male) 16.8

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