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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Low
Cells in molecular layer: Medium
Purkinje cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1009.5 nTPM
HPA Brain:457.1 nTPM
GTEx:1009.5 nTPM
FANTOM5:3.2 Scaled Tags Per Million
Pig:364.5 nTPM
Mouse:846.2 nTPM
Allen mouse:8.2 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA058373
Purkinje cells High
Cells in granular layer Low
Cells in molecular layer Medium



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

457.1
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 457.1
1768 Female, age 72, unknown 564.2
2006 Male, age 61, right hemisphere 509.8
2055 Female, age 91, right hemisphere 472.2
1769 Male, age 76, right hemisphere 470.1
2101 Male, age 74, right hemisphere 435.1
1788 Male, age 55, unknown 410.7
2003 Female, age 85, right hemisphere 402.9
1774 Male, age 80, left hemisphere 391.9
Cerebellar nuclei
nTPM: 417.7
2783 Female, age 72, unknown 499.6
2175 Male, age 61, right hemisphere 483.0
1871 Male, age 74, unknown 463.0
1879 Male, age 55, unknown 455.8
2005 Male, age 80, left hemisphere 430.9
1966 Female, age 91, left hemisphere 387.2
2318 Male, age 74, left hemisphere 372.8
2882 Male, age 76, left hemisphere 354.0
2177 Female, age 85, both hemispheres 312.8
Flocculonodular lobe
nTPM: 403.3
2004 Male, age 61, right hemisphere 467.1
1765 Male, age 55, unknown 439.4
1792 Male, age 74, unknown 413.5
1767 Male, age 76, left hemisphere 403.3
2176 Female, age 91, right hemisphere 386.7
1771 Male, age 80, left hemisphere 380.8
1835 Female, age 85, right hemisphere 332.8
Vermis
nTPM: 379.9
1928 Female, age 72, unknown 520.8
1770 Male, age 76, left hemisphere 447.7
1825 Male, age 74, unknown 421.9
2834 Male, age 80, left hemisphere 405.5
1766 Male, age 55, unknown 362.1
1778 Female, age 91, left hemisphere 357.9
1751 Male, age 74, right hemisphere 339.8
1988 Female, age 85, left hemisphere 317.0
2460 Male, age 61, both hemispheres 246.5

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1009.5
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 1009.5
Samples: 215

Max nTPM: 1960.4
Min nTPM: 546.8
Std nTPM: 246.8
Median nTPM: 983.3
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 1960.4
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 1862.1
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 1846.2
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 1687.8
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 1675.4
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 1644.9
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 1607.9
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 1570.6
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 1564.2
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 1508.4
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 1495.8
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 1487.4
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 1477.9
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 1440.2
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 1430.2
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 1411.5
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 1409.5
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 1369.8
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 1348.6
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 1332.6
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 1331.9
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 1325.7
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 1322.0
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 1321.8
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 1314.1
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 1311.8
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 1310.4
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 1280.8
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 1279.1
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 1274.4
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 1262.3
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 1241.0
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 1230.6
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 1224.1
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 1210.7
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 1205.6
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 1193.6
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 1184.2
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 1172.1
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 1169.2
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 1167.7
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 1165.8
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 1157.7
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 1150.6
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 1145.1
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 1144.4
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 1134.6
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 1130.2
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 1129.8
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 1118.3
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 1117.8
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 1117.6
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 1116.0
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 1113.5
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 1105.9
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 1103.6
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 1103.0
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 1096.8
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 1096.6
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 1095.2
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 1094.2
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 1091.5
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 1091.2
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 1089.2
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 1082.8
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 1078.6
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 1076.3
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 1076.0
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 1070.7
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 1070.4
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 1070.2
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 1069.1
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 1068.6
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 1068.0
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 1067.1
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 1065.1
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 1064.2
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 1060.2
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 1058.9
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 1056.0
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 1055.7
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 1052.4
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 1049.6
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 1049.1
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 1037.9
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 1035.1
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 1033.1
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 1032.4
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 1030.8
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 1025.8
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 1020.9
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 1019.6
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 1019.3
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 1018.9
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 1016.8
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 1015.3
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 1010.7
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 1010.0
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 1008.0
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 1005.6
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 1003.2
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 999.1
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 998.9
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 995.3
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 995.0
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 992.7
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 986.1
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 983.3
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 978.0
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 975.9
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 974.5
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 973.7
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 973.2
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 970.9
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 969.9
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 960.0
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 955.4
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 951.1
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 942.9
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 942.6
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 937.5
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 936.1
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 933.5
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 930.2
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 929.9
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 929.7
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 927.6
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 925.9
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 925.4
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 923.6
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 922.2
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 920.5
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 918.6
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 917.2
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 910.0
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 904.5
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 904.2
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 903.5
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 903.4
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 895.1
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 892.6
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 890.6
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 889.4
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 889.2
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 887.5
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 887.1
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 886.5
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 885.2
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 884.6
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 877.6
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 875.5
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 875.5
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 873.4
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 871.4
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 863.7
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 863.4
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 862.5
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 853.2
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 848.2
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 848.2
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 847.5
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 841.7
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 841.6
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 837.7
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 835.1
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 827.1
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 826.4
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 824.2
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 824.2
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 822.1
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 817.8
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 815.1
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 815.0
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 814.0
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 811.5
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 809.1
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 798.7
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 792.2
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 790.7
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 788.7
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 788.4
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 781.9
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 780.7
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 769.7
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 766.7
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 761.5
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 760.1
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 755.5
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 745.5
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 743.2
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 742.5
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 741.5
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 740.3
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 740.1
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 736.4
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 734.9
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 712.8
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 708.3
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 705.5
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 705.4
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 678.6
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 674.7
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 673.6
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 668.4
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 663.1
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 660.1
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 659.5
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 639.0
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 619.2
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 616.0
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 603.8
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 600.1
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 595.6
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 585.2
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 546.8
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Brain - Cerebellum
Average nTPM: 861.9
Samples: 241

Max nTPM: 1419.7
Min nTPM: 538.6
Std nTPM: 155.2
Median nTPM: 845.1
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 1419.7
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 1322.5
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 1248.3
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 1239.8
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 1213.7
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 1205.8
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 1198.1
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 1170.8
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 1163.6
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 1160.6
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 1142.5
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 1139.1
GTEX-X261-3126-SM-4PQZC 50-59 years, male 1108.9
GTEX-1192X-3226-SM-5987D 50-59 years, male 1107.0
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 1105.9
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 1105.7
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 1103.7
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 1087.5
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 1087.1
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 1086.7
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 1082.9
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 1080.5
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 1077.9
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 1075.6
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 1071.6
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 1062.2
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 1053.6
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 1052.8
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 1052.4
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 1044.4
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 1040.4
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 1038.6
GTEX-1B933-3026-SM-731DB 50-59 years, female 1038.0
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 1035.7
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 1034.6
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 1030.1
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 1029.1
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 1020.7
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 1020.3
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 1019.9
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 1019.3
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 1017.9
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 1016.6
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 1016.6
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 1013.0
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 1005.4
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 1001.8
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 1000.9
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 998.4
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 996.0
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 995.1
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 993.4
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 991.8
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 987.0
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 985.2
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 981.8
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 981.2
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 978.7
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 975.3
GTEX-15G19-2826-SM-6M48K 60-69 years, male 973.4
GTEX-14ABY-3026-SM-664NE 50-59 years, male 963.0
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 961.2
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 958.4
GTEX-WL46-2826-SM-3LK81 50-59 years, male 957.6
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 957.1
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 955.6
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 949.9
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 942.8
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 940.1
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 939.1
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 939.1
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 937.7
GTEX-14PN4-3026-SM-664O4 50-59 years, male 937.5
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 935.9
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 935.2
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 932.8
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 929.5
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 925.1
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 921.2
GTEX-13112-2926-SM-5DUWT 50-59 years, male 918.3
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 917.3
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 910.7
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 909.3
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 907.9
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 905.3
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 904.7
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 900.2
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 899.7
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 896.2
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 895.2
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 893.4
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 893.1
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 888.8
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 888.6
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 887.6
GTEX-145LS-3026-SM-5O99S 60-69 years, female 884.9
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 884.7
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 883.8
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 881.2
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 880.6
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 877.6
GTEX-17EVP-2926-SM-793BU 40-49 years, male 874.5
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 872.2
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 871.8
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 868.6
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 866.1
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 864.5
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 864.3
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 864.1
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 862.6
GTEX-14E6D-2926-SM-664OP 50-59 years, male 861.5
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 861.3
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 858.8
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 855.9
GTEX-11DYG-2926-SM-5H132 60-69 years, male 854.6
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 850.8
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 849.8
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 847.8
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 847.5
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 845.3
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 845.1
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 844.2
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 843.8
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 843.2
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 838.3
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 837.2
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 836.9
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 835.6
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 830.8
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 830.7
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 828.8
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 827.3
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 822.9
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 817.0
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 816.3
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 816.2
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 815.7
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 815.1
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 815.1
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 812.2
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 812.1
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 811.6
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 811.4
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 810.0
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 809.6
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 809.4
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 808.3
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 808.1
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 807.4
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 806.9
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 806.8
GTEX-11ONC-3026-SM-5985W 60-69 years, male 806.4
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 805.6
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 803.4
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 802.3
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 801.9
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 797.8
GTEX-RU72-2926-SM-2TF66 50-59 years, female 795.4
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 793.8
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 792.9
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 792.6
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 789.8
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 788.5
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 786.5
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 785.2
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 782.8
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 782.8
GTEX-11NUK-3026-SM-5986K 50-59 years, male 782.5
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 780.1
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 779.7
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 772.0
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 771.3
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 767.7
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 767.6
GTEX-18465-2926-SM-7KFSE 50-59 years, male 764.3
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 763.0
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 762.6
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 761.8
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 759.5
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 755.6
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 752.2
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 751.5
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 749.0
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 747.9
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 743.0
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 739.9
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 739.8
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 736.0
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 732.2
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 730.5
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 730.4
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 728.4
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 728.3
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 719.4
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 716.2
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 715.8
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 715.5
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 714.7
GTEX-17HII-2926-SM-79OMK 50-59 years, male 714.2
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 711.7
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 711.6
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 710.0
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 709.5
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 708.3
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 707.2
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 706.1
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 704.4
GTEX-12126-0926-SM-5FQTW 20-29 years, male 702.4
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 701.7
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 699.0
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 696.1
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 690.5
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 686.1
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 685.9
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 683.8
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 677.1
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 676.7
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 674.3
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 673.4
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 672.9
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 666.9
GTEX-11EI6-2926-SM-5985U 60-69 years, male 666.7
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 659.6
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 656.5
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 656.4
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 621.1
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 615.1
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 610.0
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 609.6
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 609.1
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 605.6
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 602.5
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 591.3
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 590.4
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 588.5
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 588.1
GTEX-144GL-2926-SM-5O99F 50-59 years, male 587.8
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 581.9
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 569.1
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 568.2
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 538.6
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

3.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 3.2
FF:10166-103B4 76 years, female 4.0
FF:10083-102B2 22-68 years, mixed 2.4

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

364.5
Pig sample Sample description nTPM
Cerebellum
nTPM: 364.6
Samples: 4

Max nTPM: 462.9
Min nTPM: 309.3
Sample A Female 462.9
Sample B Female 327.5
Sample C Male 358.5
Sample D Male 309.3

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

846.2
Mouse sample Sample description nTPM
Cerebellum
nTPM: 846.2
Samples: 4

Max nTPM: 885.3
Min nTPM: 806.8
Sample A Male 806.8
Sample B Male 847.5
Sample C Female 845.1
Sample D Female 885.3

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.2
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 8.2
68410596 Antisense, RP_041214_02_C02, Mouse strain C57BL/6J (56 days, male) 8.2

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