PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:506.9 nTPM
FANTOM5:3.7 Scaled Tags Per Million
Pig:531.1 nTPM
Mouse:757.3 nTPM
Allen mouse:13.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 506.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 444.9
2090 Male, age 80, both hemispheres 501.0
2188 Female, age 91, both hemispheres 456.6
2301 Female, age 85, both hemispheres 420.3
1984 Male, age 76, both hemispheres 401.9
Area postrema
nTPM: 428.0
2799 Male, age 61, both hemispheres 509.8
2306 Male, age 80, both hemispheres 447.8
2054 Male, age 76, both hemispheres 326.4
Dorsal cochlear nucleus
nTPM: 448.6
2802 Male, age 74, right hemisphere 509.7
2187 Female, age 91, both hemispheres 474.3
2378 Male, age 80, both hemispheres 474.0
2370 Male, age 61, both hemispheres 411.1
2058 Male, age 76, both hemispheres 373.9
Dorsal medullary reticular nucleus
nTPM: 388.1
2373 Male, age 61, both hemispheres 412.9
2040 Female, age 85, both hemispheres 400.9
2088 Male, age 76, both hemispheres 350.6
Dorsal motor vagal complex
nTPM: 405.8
2797 Male, age 61, both hemispheres 572.2
2133 Female, age 91, both hemispheres 435.0
2807 Female, age 85, both hemispheres 432.2
2643 Male, age 74, both hemispheres 414.9
2000 Male, age 74, unknown 377.4
2844 Male, age 55, unknown 370.8
2813 Female, age 72, unknown 333.1
2185 Male, age 76, both hemispheres 310.5
Dorsal tegmental nucleus
nTPM: 417.6
2326 Male, age 74, both hemispheres 476.4
2083 Male, age 80, both hemispheres 473.1
2358 Male, age 61, both hemispheres 363.2
1936 Male, age 76, left hemisphere 357.6
Dorsolateral tegmental area
nTPM: 433.0
2654 Male, age 80, both hemispheres 505.3
2337 Male, age 61, both hemispheres 467.4
2360 Male, age 74, both hemispheres 419.3
2751 Female, age 85, both hemispheres 415.2
2141 Male, age 76, both hemispheres 357.9
Gigantocellular reticular nuclei, medullary
nTPM: 407.7
2314 Male, age 61, both hemispheres 454.5
2387 Female, age 91, both hemispheres 444.7
1876 Female, age 85, both hemispheres 427.6
2310 Male, age 80, both hemispheres 391.9
2022 Male, age 76, right hemisphere 378.1
2462 Male, age 74, both hemispheres 349.7
Gigantocellular reticular nuclei, pars
nTPM: 378.1
2084 Female, age 85, both hemispheres 416.5
2168 Male, age 76, both hemispheres 405.5
2706 Male, age 80, both hemispheres 373.9
2336 Male, age 61, both hemispheres 353.0
2330 Male, age 80, both hemispheres 341.8
Inferior olive
nTPM: 445.3
2178 Male, age 61, both hemispheres 476.3
2379 Male, age 80, both hemispheres 468.2
2563 Male, age 74, both hemispheres 455.7
2085 Female, age 85, both hemispheres 429.2
2628 Female, age 91, both hemispheres 397.2
Kolliker-Fuse nucleus
nTPM: 427.4
2315 Male, age 76, right hemisphere 481.7
2163 Male, age 80, both hemispheres 402.7
2793 Female, age 91, left hemisphere 397.8
Lateral lemniscal nuclei
nTPM: 354.7
2169 Male, age 76, both hemispheres 453.2
2746 Female, age 85, left hemisphere 387.6
2320 Female, age 91, left hemisphere 340.9
2453 Male, age 74, right hemisphere 323.0
2036 Male, age 80, both hemispheres 268.8
Lateral medullary reticular nucleus
nTPM: 437.7
2305 Male, age 74, both hemispheres 491.1
2852 Male, age 80, both hemispheres 480.9
2190 Female, age 85, both hemispheres 454.8
2804 Female, age 91, both hemispheres 446.6
2374 Male, age 61, both hemispheres 397.0
2044 Male, age 76, both hemispheres 355.8
Lateral parabrachial nucleus
nTPM: 441.4
2792 Male, age 76, both hemispheres 520.6
2139 Female, age 85, right hemisphere 461.3
2013 Male, age 80, both hemispheres 452.8
2790 Male, age 61, both hemispheres 331.0
Lateral vestibular nucleus
nTPM: 384.0
2311 Male, age 80, both hemispheres 446.6
2184 Male, age 76, both hemispheres 321.3
Locus coeruleus
nTPM: 356.2
2720 Male, age 74, both hemispheres 386.4
2123 Female, age 91, both hemispheres 382.6
2014 Male, age 55, unknown 369.9
2162 Male, age 80, both hemispheres 369.8
2317 Female, age 72, unknown 353.5
2788 Male, age 74, unknown 348.1
1980 Male, age 76, both hemispheres 283.1
Medial olivary nucleus
nTPM: 506.9
1943 Male, age 61, both hemispheres 573.7
1962 Male, age 76, both hemispheres 527.4
2138 Female, age 91, both hemispheres 481.2
2851 Male, age 80, both hemispheres 445.5
Medial parabrachial nucleus
nTPM: 405.0
2170 Female, age 91, both hemispheres 502.6
2854 Male, age 80, both hemispheres 449.4
2463 Female, age 85, right hemisphere 393.5
2786 Male, age 76, both hemispheres 361.6
2156 Male, age 61, both hemispheres 317.7
Medial periolivary nuclei
nTPM: 423.0
2063 Male, age 76, both hemispheres 538.0
2081 Male, age 80, both hemispheres 414.4
2791 Male, age 74, right hemisphere 398.7
2171 Female, age 85, both hemispheres 392.9
2458 Female, age 91, both hemispheres 371.3
Medial vestibular nucleus
nTPM: 408.5
2803 Female, age 91, both hemispheres 507.2
2801 Male, age 74, both hemispheres 434.0
2093 Male, age 80, both hemispheres 423.5
2743 Female, age 85, both hemispheres 370.5
2624 Male, age 61, both hemispheres 367.4
2134 Male, age 76, both hemispheres 348.5
Motor facial nucleus
nTPM: 396.3
2062 Male, age 76, both hemispheres 490.7
2126 Male, age 61, both hemispheres 419.2
2697 Female, age 85, both hemispheres 392.5
2795 Female, age 91, both hemispheres 384.5
2365 Male, age 74, right hemisphere 379.3
2327 Male, age 80, both hemispheres 311.4
Motor hypoglossal nucleus
nTPM: 367.9
2132 Female, age 85, both hemispheres 489.5
2125 Female, age 91, both hemispheres 466.4
2182 Male, age 80, both hemispheres 358.4
2461 Male, age 61, both hemispheres 263.1
2277 Male, age 76, both hemispheres 262.1
Motor trigeminal nucleus
nTPM: 370.9
2309 Male, age 76, both hemispheres 389.6
2321 Female, age 91, both hemispheres 385.3
2560 Male, age 74, both hemispheres 383.8
2335 Male, age 61, both hemispheres 355.2
2079 Male, age 80, both hemispheres 340.7
Nuclei of the trapezoid body
nTPM: 419.7
1983 Male, age 76, both hemispheres 559.1
2159 Male, age 61, both hemispheres 412.6
2166 Male, age 80, both hemispheres 390.2
2735 Female, age 85, both hemispheres 384.9
2368 Female, age 91, both hemispheres 351.9
Nucleus ambiguus
nTPM: 401.4
2071 Male, age 76, both hemispheres 493.7
2096 Female, age 85, both hemispheres 309.0
Nucleus cuneatus
nTPM: 391.0
2380 Male, age 80, both hemispheres 480.5
2808 Female, age 85, both hemispheres 456.7
2376 Male, age 61, both hemispheres 430.8
2805 Female, age 91, both hemispheres 414.1
2564 Male, age 74, both hemispheres 392.6
2381 Male, age 80, both hemispheres 373.1
2562 Male, age 61, both hemispheres 346.7
2100 Male, age 76, both hemispheres 325.8
2131 Male, age 76, both hemispheres 298.9
Nucleus gracilis
nTPM: 415.8
2382 Male, age 80, both hemispheres 445.6
2627 Male, age 74, both hemispheres 420.6
2299 Female, age 85, both hemispheres 381.1
Nucleus raphe magnus
nTPM: 379.3
2051 Male, age 76, both hemispheres 420.6
2160 Male, age 61, both hemispheres 392.1
2459 Female, age 91, both hemispheres 381.3
2172 Female, age 85, both hemispheres 365.6
2455 Male, age 74, both hemispheres 360.6
2328 Male, age 80, both hemispheres 355.5
Nucleus raphe obscurus
nTPM: 486.0
2845 Female, age 85, midline 503.9
2142 Male, age 76, midline 491.6
2800 Male, age 61, midline 462.6
Nucleus raphe pallidus
nTPM: 490.0
1924 Male, age 61, midline 572.0
2145 Male, age 76, midline 475.5
2183 Male, age 80, midline 422.4
Nucleus tractus solitarii
nTPM: 373.3
2144 Female, age 91, right hemisphere 554.7
2191 Female, age 85, both hemispheres 367.8
2656 Male, age 76, both hemispheres 307.2
2307 Male, age 80, both hemispheres 263.3
Paramedian reticular nucleus
nTPM: 411.5
2057 Male, age 80, both hemispheres 416.9
2052 Male, age 76, both hemispheres 413.6
2050 Female, age 85, both hemispheres 410.5
2313 Male, age 61, both hemispheres 405.0
Parvicellular reticular nuclei
nTPM: 383.4
2095 Male, age 76, both hemispheres 426.6
2119 Male, age 80, both hemispheres 409.3
2558 Male, age 74, both hemispheres 314.4
Parvicellular reticular nuclei, medullary
nTPM: 392.0
2189 Female, age 91, both hemispheres 404.7
2091 Female, age 85, both hemispheres 394.3
2181 Male, age 80, left hemisphere 377.0
Pedunculopontine tegmental nucleus
nTPM: 415.6
2338 Male, age 61, both hemispheres 476.7
2334 Male, age 80, both hemispheres 431.7
1921 Female, age 85, both hemispheres 338.5
Peritrigeminal nucleus
nTPM: 457.5
2067 Female, age 85, both hemispheres 508.8
2136 Male, age 76, both hemispheres 466.8
2179 Male, age 61, both hemispheres 396.8
Pontine nuclei
nTPM: 410.4
1863 Male, age 55, unknown 450.7
1968 Male, age 76, left hemisphere 439.6
2319 Female, age 91, both hemispheres 421.7
2727 Male, age 61, right hemisphere 406.3
2109 Female, age 72, unknown 394.7
2787 Female, age 85, both hemispheres 392.4
2454 Male, age 74, left hemisphere 390.7
2115 Male, age 80, left hemisphere 386.8
Pontine raphe nucleus
nTPM: 396.1
2122 Female, age 85, midline 415.0
2853 Male, age 76, midline 377.3
Posteroventral cochlear nucleus
nTPM: 455.6
2341 Male, age 80, both hemispheres 536.8
2135 Female, age 91, both hemispheres 486.0
2371 Male, age 61, both hemispheres 461.2
2752 Female, age 85, both hemispheres 433.8
2070 Male, age 76, both hemispheres 360.2
Prepositus hypoglossal nucleus
nTPM: 452.8
2855 Female, age 85, right hemisphere 520.2
2086 Male, age 80, both hemispheres 385.5
Principal sensory trigeminal nucleus
nTPM: 364.1
2158 Male, age 61, both hemispheres 383.4
2367 Female, age 91, left hemisphere 367.6
2324 Male, age 76, both hemispheres 363.2
2008 Male, age 80, left hemisphere 342.0
Reticular pontine nucleus, caudal
nTPM: 401.4
2092 Male, age 76, both hemispheres 477.6
2559 Male, age 74, both hemispheres 446.1
2457 Female, age 91, both hemispheres 398.1
2332 Male, age 80, right hemisphere 283.6
Reticular pontine nucleus, oral
nTPM: 396.6
1939 Male, age 80, both hemispheres 445.4
2167 Male, age 76, both hemispheres 401.5
2366 Female, age 91, both hemispheres 397.3
2012 Female, age 85, both hemispheres 378.5
2361 Male, age 74, both hemispheres 360.5
Reticulotegmental nucleus
nTPM: 393.4
2322 Female, age 91, both hemispheres 440.7
2452 Male, age 74, both hemispheres 407.2
2325 Male, age 76, both hemispheres 372.0
2333 Male, age 80, both hemispheres 354.0
Spinal trigeminal nucleus, caudal
nTPM: 362.9
2390 Female, age 91, both hemispheres 384.9
2312 Male, age 61, both hemispheres 379.8
2308 Male, age 80, both hemispheres 373.5
2642 Male, age 74, both hemispheres 342.7
2447 Male, age 76, both hemispheres 333.6
Spinal trigeminal nucleus, interpolar
nTPM: 389.9
2033 Male, age 80, both hemispheres 408.5
2389 Female, age 91, both hemispheres 407.7
2066 Male, age 76, right hemisphere 396.0
2386 Female, age 85, both hemispheres 389.0
2625 Male, age 61, both hemispheres 348.2
Spinal trigeminal nucleus, oral
nTPM: 351.0
1978 Male, age 76, both hemispheres 359.5
2164 Male, age 80, both hemispheres 348.7
2737 Female, age 85, both hemispheres 344.7
Spinal vestibular nucleus
nTPM: 460.8
2384 Male, age 74, both hemispheres 533.6
2806 Female, age 85, both hemispheres 498.8
2780 Male, age 80, both hemispheres 449.5
2186 Female, age 91, both hemispheres 447.8
2796 Male, age 61, both hemispheres 433.8
2748 Male, age 76, both hemispheres 400.9
Subcoeruleus area
nTPM: 409.1
2451 Male, age 74, both hemispheres 456.2
1958 Male, age 80, both hemispheres 420.0
2369 Female, age 85, left hemisphere 414.3
2089 Male, age 76, left hemisphere 384.9
2323 Female, age 91, left hemisphere 369.9
Superior olive
nTPM: 404.1
2020 Male, age 76, both hemispheres 496.4
1875 Female, age 85, both hemispheres 413.7
2364 Male, age 74, right hemisphere 398.0
2561 Female, age 91, both hemispheres 359.2
2329 Male, age 80, right hemisphere 353.1
Superior vestibular nucleus
nTPM: 458.7
2383 Male, age 74, both hemispheres 517.6
2015 Male, age 80, both hemispheres 469.6
2061 Male, age 76, both hemispheres 388.9
Ventral medullary reticular nucleus
nTPM: 422.4
2372 Male, age 61, both hemispheres 468.9
2060 Male, age 76, both hemispheres 375.9
Ventral periolivary nuclei
nTPM: 414.7
2023 Male, age 76, both hemispheres 503.8
2130 Female, age 85, both hemispheres 398.5
2165 Male, age 80, both hemispheres 379.1
2794 Female, age 91, left hemisphere 377.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 438.1
2118 Male, age 80, both hemispheres 518.4
2302 Female, age 91, both hemispheres 452.7
2741 Female, age 85, both hemispheres 412.8
1986 Male, age 76, both hemispheres 406.7
2180 Male, age 61, both hemispheres 400.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 381.2
1959 Male, age 76, both hemispheres 449.3
2161 Male, age 80, both hemispheres 391.9
2840 Female, age 85, both hemispheres 391.5
2359 Male, age 61, both hemispheres 367.4
2456 Female, age 91, both hemispheres 357.4
2449 Male, age 74, both hemispheres 329.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 3.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 3.7
FF:10165-103B3 76 years, female 3.9
FF:10182-103D2 60 years, female 3.5
Medulla oblongata
Scaled Tags Per Million: 2.7
FF:10155-103A2 76 years, female 4.4
FF:10038-101F2 18-64 years, mixed 2.4
FF:10174-103C3 60 years, female 1.4
Pons
Scaled Tags Per Million: 2.4
FF:10033-101E6 18-54 years, mixed 2.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 531.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 520.5
Samples: 4

Max nTPM: 635.7
Min nTPM: 424.3
Sample A Female 450.0
Sample B Female 424.3
Sample C Male 571.8
Sample D Male 635.7
Pons
nTPM: 531.1
Samples: 4

Max nTPM: 670.9
Min nTPM: 401.6
Sample A Female 500.4
Sample B Female 401.6
Sample C Male 670.9
Sample D Male 551.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 757.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 757.4
Samples: 4

Max nTPM: 778.6
Min nTPM: 747.0
Sample A Male 747.6
Sample B Male 747.0
Sample C Female 756.2
Sample D Female 778.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 13.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 13.1
68410596 Antisense, RP_041214_02_C02, Mouse strain C57BL/6J (56 days, male) 13.1
Pons
Expression energy: 13.3
68410596 Antisense, RP_041214_02_C02, Mouse strain C57BL/6J (56 days, male) 13.3

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