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RPL7
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:776.9 nTPM
FANTOM5:3.4 Scaled Tags Per Million
Pig:316.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA058373
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

776.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 776.9
Samples: 246

Max nTPM: 1644.7
Min nTPM: 426.0
Std nTPM: 196.4
Median nTPM: 750.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1644.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1603.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1543.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1367.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1329.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1304.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1275.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1270.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1251.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1190.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1184.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1181.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1159.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1151.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1147.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1146.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1072.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1059.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1036.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1034.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1034.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1030.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1023.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1016.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1011.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1008.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1007.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 998.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 996.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 992.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 983.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 970.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 968.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 964.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 963.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 953.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 953.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 948.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 948.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 944.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 943.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 939.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 939.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 935.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 933.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 932.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 930.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 918.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 915.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 910.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 906.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 903.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 899.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 889.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 884.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 883.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 871.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 865.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 858.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 858.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 856.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 850.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 850.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 846.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 846.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 844.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 837.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 833.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 830.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 829.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 829.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 828.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 827.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 827.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 826.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 826.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 826.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 825.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 825.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 824.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 822.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 821.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 819.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 817.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 817.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 817.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 810.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 809.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 801.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 801.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 794.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 792.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 790.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 789.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 789.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 783.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 781.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 779.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 779.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 779.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 778.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 777.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 776.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 775.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 775.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 774.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 774.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 767.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 766.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 765.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 765.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 764.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 763.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 761.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 760.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 755.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 754.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 754.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 753.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 753.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 752.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 751.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 751.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 749.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 748.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 747.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 744.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 741.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 741.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 738.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 736.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 736.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 725.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 722.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 719.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 718.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 718.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 715.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 713.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 711.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 710.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 707.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 705.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 704.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 701.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 701.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 701.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 699.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 695.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 693.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 689.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 686.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 686.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 685.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 684.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 684.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 684.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 681.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 681.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 679.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 677.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 676.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 676.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 676.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 675.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 675.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 673.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 672.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 671.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 671.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 671.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 670.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 668.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 668.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 664.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 664.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 663.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 661.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 660.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 660.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 660.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 659.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 657.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 655.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 652.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 650.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 649.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 645.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 643.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 642.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 642.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 642.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 641.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 639.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 635.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 633.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 630.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 624.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 621.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 620.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 608.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 607.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 602.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 600.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 597.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 595.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 594.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 593.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 591.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 591.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 589.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 586.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 584.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 584.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 582.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 582.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 581.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 576.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 576.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 573.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 572.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 571.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 566.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 565.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 564.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 561.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 559.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 558.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 550.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 547.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 547.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 530.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 528.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 527.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 526.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 523.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 521.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 521.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 513.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 509.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 505.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 493.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 487.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 487.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 448.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 426.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

3.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 3.4
FF:10164-103B2 76 years, female 3.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

316.7
Pig sample Sample description nTPM
Caudate
nTPM: 316.7
Samples: 4

Max nTPM: 335.8
Min nTPM: 284.9
Sample A Female 335.8
Sample B Female 317.0
Sample C Male 329.0
Sample D Male 284.9

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