HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:689.6 nTPM
HPA Brain:400.6 nTPM
GTEx:689.6 nTPM
FANTOM5:302.8 Scaled Tags Per Million
Pig:328.6 nTPM
Mouse:590.5 nTPM
Allen mouse:10.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059015
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 400.6
Sample id Sample description nTPM
Hippocampus
nTPM: 400.6
1898 Male, age 80, left hemisphere 471.3
2529 Female, age 94, left hemisphere 457.3
2621 Female, age 67, right hemisphere 399.3
1911 Female, age 85, right hemisphere 373.4
1855 Male, age 76, left hemisphere 371.3
2148 Female, age 91, left hemisphere 331.4
Dentate gyrus
nTPM: 373.0
2010 Male, age 76, both hemispheres 456.9
2530 Female, age 94, left hemisphere 402.2
2531 Female, age 67, both hemispheres 367.3
2246 Female, age 85, both hemispheres 344.0
2528 Male, age 74, both hemispheres 335.7
1927 Female, age 91, both hemispheres 331.6
Entorhinal gyrus
nTPM: 377.5
2686 Male, age 75, right hemisphere 421.2
1787 Male, age 76, left hemisphere 390.5
2117 Female, age 91, right hemisphere 384.6
1938 Female, age 85, left hemisphere 375.9
2764 Male, age 80, right hemisphere 371.8
2613 Female, age 94, left hemisphere 320.9
Hippocampus, CA1
nTPM: 368.3
2749 Male, age 80, left hemisphere 423.0
2045 Male, age 76, both hemispheres 371.7
2082 Female, age 91, right hemisphere 354.6
1873 Female, age 85, both hemispheres 352.9
2527 Male, age 74, both hemispheres 339.3
Hippocampus, CA2
nTPM: 363.5
1963 Male, age 80, left hemisphere 409.6
1892 Male, age 76, both hemispheres 356.9
2437 Female, age 94, left hemisphere 356.9
2113 Female, age 91, right hemisphere 354.8
2249 Male, age 74, both hemispheres 354.8
1940 Female, age 85, left hemisphere 348.1
Hippocampus, CA3
nTPM: 344.2
1867 Male, age 76, both hemispheres 405.0
1891 Female, age 85, both hemispheres 370.5
2861 Female, age 67, both hemispheres 353.8
2137 Male, age 80, left hemisphere 347.7
2436 Male, age 74, both hemispheres 307.6
2620 Female, age 94, left hemisphere 280.6
Parahippocampal cortex
nTPM: 342.2
2018 Male, age 76, both hemispheres 445.0
1933 Female, age 85, both hemispheres 385.7
2250 Female, age 67, right hemisphere 372.3
2245 Female, age 91, both hemispheres 343.9
1990 Female, age 91, right hemisphere 341.7
1850 Male, age 80, both hemispheres 339.1
2532 Female, age 72, left hemisphere 337.5
2692 Male, age 74, both hemispheres 311.4
2622 Female, age 67, right hemisphere 303.4
2693 Female, age 94, both hemispheres 241.6
Perirhinal gyrus
nTPM: 352.2
1847 Female, age 91, left hemisphere 399.2
1794 Male, age 80, right hemisphere 373.5
1841 Female, age 85, right hemisphere 363.1
2521 Female, age 94, right hemisphere 319.9
2848 Male, age 76, right hemisphere 305.3
Subiculum
nTPM: 376.6
2042 Male, age 76, both hemispheres 417.6
1977 Female, age 85, both hemispheres 396.6
1901 Male, age 80, both hemispheres 383.3
2619 Male, age 74, both hemispheres 369.1
2438 Female, age 94, left hemisphere 358.8
2729 Female, age 91, right hemisphere 334.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 689.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 689.6
Samples: 197

Max nTPM: 1605.8
Min nTPM: 296.7
Std nTPM: 219.8
Median nTPM: 646.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1605.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1560.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1376.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1304.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1249.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1248.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1220.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1211.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 1188.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1169.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1114.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 302.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 302.8
FF:10153-102I9 76 years, female 343.9
FF:10169-103B7 60 years, female 261.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 328.6
Pig sample Sample description nTPM
Subiculum
nTPM: 265.0
Samples: 4

Max nTPM: 375.5
Min nTPM: 210.5
Sample A Female 375.5
Sample B Female 261.4
Sample C Male 210.5
Sample D Male 212.7
Dorsal hippocampus
nTPM: 328.6
Samples: 4

Max nTPM: 457.1
Min nTPM: 208.4
Sample A Female 457.1
Sample B Female 292.4
Sample C Male 356.6
Sample D Male 208.4
Entorhinal cortex
nTPM: 269.9
Samples: 4

Max nTPM: 312.4
Min nTPM: 204.0
Sample A Female 252.3
Sample B Female 310.7
Sample C Male 312.4
Sample D Male 204.0
Ventral hippocampus
nTPM: 291.4
Samples: 4

Max nTPM: 346.9
Min nTPM: 225.5
Sample A Female 287.9
Sample B Female 225.5
Sample C Male 346.9
Sample D Male 305.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 590.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 590.6
Samples: 4

Max nTPM: 612.1
Min nTPM: 570.7
Sample A Male 599.0
Sample B Male 612.1
Sample C Female 580.4
Sample D Female 570.7
Hippocampal formation
nTPM: 582.4
Samples: 4

Max nTPM: 630.6
Min nTPM: 546.4
Sample A Male 590.5
Sample B Male 562.0
Sample C Female 546.4
Sample D Female 630.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.6
74580990 Antisense, RP_060215_02_C09, Mouse strain C57BL/6J (56 days, male) 10.6

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