PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:529.0 nTPM
FANTOM5:353.0 Scaled Tags Per Million
Pig:355.5 nTPM
Mouse:669.2 nTPM
Allen mouse:6.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 529.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 448.4
2090 Male, age 80, both hemispheres 485.5
2301 Female, age 85, both hemispheres 467.9
2188 Female, age 91, both hemispheres 445.0
1984 Male, age 76, both hemispheres 395.4
Area postrema
nTPM: 484.2
2799 Male, age 61, both hemispheres 570.8
2306 Male, age 80, both hemispheres 531.4
2054 Male, age 76, both hemispheres 350.4
Dorsal cochlear nucleus
nTPM: 430.6
2802 Male, age 74, right hemisphere 468.0
2187 Female, age 91, both hemispheres 442.5
2370 Male, age 61, both hemispheres 427.0
2378 Male, age 80, both hemispheres 416.2
2058 Male, age 76, both hemispheres 399.3
Dorsal medullary reticular nucleus
nTPM: 418.6
2373 Male, age 61, both hemispheres 440.1
2040 Female, age 85, both hemispheres 435.2
2088 Male, age 76, both hemispheres 380.4
Dorsal motor vagal complex
nTPM: 457.1
2797 Male, age 61, both hemispheres 619.4
2643 Male, age 74, both hemispheres 533.8
2000 Male, age 74, unknown 444.9
2133 Female, age 91, both hemispheres 423.4
2807 Female, age 85, both hemispheres 423.2
2185 Male, age 76, both hemispheres 423.0
2844 Male, age 55, unknown 414.6
2813 Female, age 72, unknown 374.7
Dorsal tegmental nucleus
nTPM: 445.3
2326 Male, age 74, both hemispheres 478.9
2083 Male, age 80, both hemispheres 469.2
1936 Male, age 76, left hemisphere 417.3
2358 Male, age 61, both hemispheres 415.9
Dorsolateral tegmental area
nTPM: 447.8
2337 Male, age 61, both hemispheres 574.7
2654 Male, age 80, both hemispheres 492.6
2751 Female, age 85, both hemispheres 428.8
2360 Male, age 74, both hemispheres 394.2
2141 Male, age 76, both hemispheres 348.8
Gigantocellular reticular nuclei, medullary
nTPM: 414.2
2314 Male, age 61, both hemispheres 538.5
2387 Female, age 91, both hemispheres 413.2
2022 Male, age 76, right hemisphere 397.3
2310 Male, age 80, both hemispheres 396.1
1876 Female, age 85, both hemispheres 390.8
2462 Male, age 74, both hemispheres 349.5
Gigantocellular reticular nuclei, pars
nTPM: 367.5
2084 Female, age 85, both hemispheres 412.8
2336 Male, age 61, both hemispheres 386.1
2706 Male, age 80, both hemispheres 361.1
2330 Male, age 80, both hemispheres 358.9
2168 Male, age 76, both hemispheres 318.8
Inferior olive
nTPM: 515.9
2563 Male, age 74, both hemispheres 558.8
2085 Female, age 85, both hemispheres 532.7
2628 Female, age 91, both hemispheres 511.2
2178 Male, age 61, both hemispheres 504.2
2379 Male, age 80, both hemispheres 472.5
Kolliker-Fuse nucleus
nTPM: 445.6
2315 Male, age 76, right hemisphere 510.9
2793 Female, age 91, left hemisphere 417.8
2163 Male, age 80, both hemispheres 408.0
Lateral lemniscal nuclei
nTPM: 330.8
2746 Female, age 85, left hemisphere 383.2
2320 Female, age 91, left hemisphere 371.4
2169 Male, age 76, both hemispheres 336.2
2453 Male, age 74, right hemisphere 325.1
2036 Male, age 80, both hemispheres 238.0
Lateral medullary reticular nucleus
nTPM: 463.5
2852 Male, age 80, both hemispheres 554.8
2804 Female, age 91, both hemispheres 487.9
2190 Female, age 85, both hemispheres 458.3
2305 Male, age 74, both hemispheres 445.2
2374 Male, age 61, both hemispheres 436.1
2044 Male, age 76, both hemispheres 398.5
Lateral parabrachial nucleus
nTPM: 447.6
2792 Male, age 76, both hemispheres 517.6
2013 Male, age 80, both hemispheres 477.4
2139 Female, age 85, right hemisphere 399.5
2790 Male, age 61, both hemispheres 396.0
Lateral vestibular nucleus
nTPM: 433.6
2311 Male, age 80, both hemispheres 489.8
2184 Male, age 76, both hemispheres 377.3
Locus coeruleus
nTPM: 376.3
2123 Female, age 91, both hemispheres 424.3
2162 Male, age 80, both hemispheres 398.9
2720 Male, age 74, both hemispheres 378.7
2014 Male, age 55, unknown 375.7
1980 Male, age 76, both hemispheres 375.2
2317 Female, age 72, unknown 370.4
2788 Male, age 74, unknown 310.9
Medial olivary nucleus
nTPM: 529.0
1943 Male, age 61, both hemispheres 606.9
1962 Male, age 76, both hemispheres 544.5
2138 Female, age 91, both hemispheres 513.2
2851 Male, age 80, both hemispheres 451.5
Medial parabrachial nucleus
nTPM: 424.7
2170 Female, age 91, both hemispheres 478.2
2156 Male, age 61, both hemispheres 438.1
2463 Female, age 85, right hemisphere 423.0
2786 Male, age 76, both hemispheres 393.0
2854 Male, age 80, both hemispheres 391.0
Medial periolivary nuclei
nTPM: 375.7
2081 Male, age 80, both hemispheres 431.8
2063 Male, age 76, both hemispheres 417.8
2791 Male, age 74, right hemisphere 354.8
2458 Female, age 91, both hemispheres 351.8
2171 Female, age 85, both hemispheres 322.2
Medial vestibular nucleus
nTPM: 400.3
2803 Female, age 91, both hemispheres 448.2
2624 Male, age 61, both hemispheres 435.5
2093 Male, age 80, both hemispheres 405.6
2801 Male, age 74, both hemispheres 393.0
2743 Female, age 85, both hemispheres 374.0
2134 Male, age 76, both hemispheres 345.5
Motor facial nucleus
nTPM: 382.0
2126 Male, age 61, both hemispheres 438.9
2795 Female, age 91, both hemispheres 406.4
2062 Male, age 76, both hemispheres 395.9
2365 Male, age 74, right hemisphere 372.7
2697 Female, age 85, both hemispheres 346.6
2327 Male, age 80, both hemispheres 331.3
Motor hypoglossal nucleus
nTPM: 406.8
2182 Male, age 80, both hemispheres 465.8
2125 Female, age 91, both hemispheres 458.6
2132 Female, age 85, both hemispheres 450.7
2277 Male, age 76, both hemispheres 365.8
2461 Male, age 61, both hemispheres 292.9
Motor trigeminal nucleus
nTPM: 408.6
2335 Male, age 61, both hemispheres 442.7
2560 Male, age 74, both hemispheres 434.5
2321 Female, age 91, both hemispheres 408.8
2309 Male, age 76, both hemispheres 386.1
2079 Male, age 80, both hemispheres 370.9
Nuclei of the trapezoid body
nTPM: 386.0
1983 Male, age 76, both hemispheres 488.7
2368 Female, age 91, both hemispheres 385.2
2166 Male, age 80, both hemispheres 376.9
2159 Male, age 61, both hemispheres 342.6
2735 Female, age 85, both hemispheres 336.5
Nucleus ambiguus
nTPM: 513.8
2071 Male, age 76, both hemispheres 531.1
2096 Female, age 85, both hemispheres 496.5
Nucleus cuneatus
nTPM: 426.5
2564 Male, age 74, both hemispheres 497.7
2808 Female, age 85, both hemispheres 478.5
2805 Female, age 91, both hemispheres 462.3
2380 Male, age 80, both hemispheres 452.5
2376 Male, age 61, both hemispheres 432.9
2562 Male, age 61, both hemispheres 418.9
2381 Male, age 80, both hemispheres 410.5
2131 Male, age 76, both hemispheres 342.5
2100 Male, age 76, both hemispheres 342.2
Nucleus gracilis
nTPM: 503.4
2382 Male, age 80, both hemispheres 517.4
2627 Male, age 74, both hemispheres 510.6
2299 Female, age 85, both hemispheres 482.2
Nucleus raphe magnus
nTPM: 366.9
2051 Male, age 76, both hemispheres 408.6
2455 Male, age 74, both hemispheres 377.2
2459 Female, age 91, both hemispheres 372.4
2328 Male, age 80, both hemispheres 362.9
2160 Male, age 61, both hemispheres 359.6
2172 Female, age 85, both hemispheres 320.5
Nucleus raphe obscurus
nTPM: 512.9
2142 Male, age 76, midline 532.4
2845 Female, age 85, midline 516.6
2800 Male, age 61, midline 489.6
Nucleus raphe pallidus
nTPM: 504.5
1924 Male, age 61, midline 604.0
2145 Male, age 76, midline 468.4
2183 Male, age 80, midline 440.9
Nucleus tractus solitarii
nTPM: 362.9
2191 Female, age 85, both hemispheres 432.3
2307 Male, age 80, both hemispheres 364.3
2656 Male, age 76, both hemispheres 350.8
2144 Female, age 91, right hemisphere 304.4
Paramedian reticular nucleus
nTPM: 404.3
2313 Male, age 61, both hemispheres 420.0
2057 Male, age 80, both hemispheres 418.6
2052 Male, age 76, both hemispheres 405.6
2050 Female, age 85, both hemispheres 372.9
Parvicellular reticular nuclei
nTPM: 396.9
2119 Male, age 80, both hemispheres 429.3
2095 Male, age 76, both hemispheres 418.3
2558 Male, age 74, both hemispheres 343.0
Parvicellular reticular nuclei, medullary
nTPM: 404.6
2189 Female, age 91, both hemispheres 409.9
2091 Female, age 85, both hemispheres 407.0
2181 Male, age 80, left hemisphere 396.9
Pedunculopontine tegmental nucleus
nTPM: 429.3
2338 Male, age 61, both hemispheres 473.9
2334 Male, age 80, both hemispheres 463.3
1921 Female, age 85, both hemispheres 350.8
Peritrigeminal nucleus
nTPM: 486.3
2067 Female, age 85, both hemispheres 567.3
2136 Male, age 76, both hemispheres 494.3
2179 Male, age 61, both hemispheres 397.2
Pontine nuclei
nTPM: 402.6
1863 Male, age 55, unknown 453.4
2319 Female, age 91, both hemispheres 435.3
2454 Male, age 74, left hemisphere 403.5
2115 Male, age 80, left hemisphere 399.8
2109 Female, age 72, unknown 391.8
1968 Male, age 76, left hemisphere 389.6
2787 Female, age 85, both hemispheres 380.2
2727 Male, age 61, right hemisphere 367.1
Pontine raphe nucleus
nTPM: 383.5
2853 Male, age 76, midline 391.3
2122 Female, age 85, midline 375.6
Posteroventral cochlear nucleus
nTPM: 465.9
2135 Female, age 91, both hemispheres 528.0
2371 Male, age 61, both hemispheres 501.8
2341 Male, age 80, both hemispheres 491.9
2752 Female, age 85, both hemispheres 417.9
2070 Male, age 76, both hemispheres 389.8
Prepositus hypoglossal nucleus
nTPM: 437.8
2855 Female, age 85, right hemisphere 443.6
2086 Male, age 80, both hemispheres 432.0
Principal sensory trigeminal nucleus
nTPM: 361.7
2367 Female, age 91, left hemisphere 397.9
2324 Male, age 76, both hemispheres 372.3
2158 Male, age 61, both hemispheres 358.0
2008 Male, age 80, left hemisphere 318.8
Reticular pontine nucleus, caudal
nTPM: 408.5
2559 Male, age 74, both hemispheres 463.4
2457 Female, age 91, both hemispheres 434.5
2092 Male, age 76, both hemispheres 428.8
2332 Male, age 80, right hemisphere 307.3
Reticular pontine nucleus, oral
nTPM: 399.4
2366 Female, age 91, both hemispheres 436.6
1939 Male, age 80, both hemispheres 435.5
2167 Male, age 76, both hemispheres 395.3
2361 Male, age 74, both hemispheres 372.5
2012 Female, age 85, both hemispheres 357.2
Reticulotegmental nucleus
nTPM: 395.9
2452 Male, age 74, both hemispheres 457.5
2322 Female, age 91, both hemispheres 397.9
2333 Male, age 80, both hemispheres 390.9
2325 Male, age 76, both hemispheres 337.1
Spinal trigeminal nucleus, caudal
nTPM: 420.1
2308 Male, age 80, both hemispheres 445.5
2312 Male, age 61, both hemispheres 443.5
2642 Male, age 74, both hemispheres 427.0
2390 Female, age 91, both hemispheres 399.4
2447 Male, age 76, both hemispheres 385.3
Spinal trigeminal nucleus, interpolar
nTPM: 414.4
2033 Male, age 80, both hemispheres 465.5
2066 Male, age 76, right hemisphere 413.8
2625 Male, age 61, both hemispheres 405.3
2386 Female, age 85, both hemispheres 395.2
2389 Female, age 91, both hemispheres 392.4
Spinal trigeminal nucleus, oral
nTPM: 381.9
1978 Male, age 76, both hemispheres 392.8
2164 Male, age 80, both hemispheres 391.5
2737 Female, age 85, both hemispheres 361.3
Spinal vestibular nucleus
nTPM: 468.1
2384 Male, age 74, both hemispheres 587.0
2748 Male, age 76, both hemispheres 461.9
2780 Male, age 80, both hemispheres 455.7
2796 Male, age 61, both hemispheres 444.9
2806 Female, age 85, both hemispheres 439.6
2186 Female, age 91, both hemispheres 419.3
Subcoeruleus area
nTPM: 407.2
2451 Male, age 74, both hemispheres 488.9
2369 Female, age 85, left hemisphere 434.8
2323 Female, age 91, left hemisphere 396.7
1958 Male, age 80, both hemispheres 378.4
2089 Male, age 76, left hemisphere 337.0
Superior olive
nTPM: 384.9
2020 Male, age 76, both hemispheres 466.6
2561 Female, age 91, both hemispheres 421.8
2364 Male, age 74, right hemisphere 365.3
2329 Male, age 80, right hemisphere 345.6
1875 Female, age 85, both hemispheres 325.0
Superior vestibular nucleus
nTPM: 443.1
2015 Male, age 80, both hemispheres 472.7
2061 Male, age 76, both hemispheres 432.4
2383 Male, age 74, both hemispheres 424.3
Ventral medullary reticular nucleus
nTPM: 439.4
2372 Male, age 61, both hemispheres 486.3
2060 Male, age 76, both hemispheres 392.5
Ventral periolivary nuclei
nTPM: 367.7
2023 Male, age 76, both hemispheres 414.8
2165 Male, age 80, both hemispheres 365.4
2794 Female, age 91, left hemisphere 359.0
2130 Female, age 85, both hemispheres 331.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 475.4
2302 Female, age 91, both hemispheres 513.9
2118 Male, age 80, both hemispheres 511.2
2741 Female, age 85, both hemispheres 454.6
1986 Male, age 76, both hemispheres 450.4
2180 Male, age 61, both hemispheres 447.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 380.2
2359 Male, age 61, both hemispheres 417.9
2456 Female, age 91, both hemispheres 400.3
2161 Male, age 80, both hemispheres 392.9
1959 Male, age 76, both hemispheres 392.3
2840 Female, age 85, both hemispheres 354.0
2449 Male, age 74, both hemispheres 324.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 353.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 343.6
FF:10182-103D2 60 years, female 370.9
FF:10165-103B3 76 years, female 316.3
Medulla oblongata
Scaled Tags Per Million: 353.0
FF:10038-101F2 18-64 years, mixed 434.3
FF:10155-103A2 76 years, female 316.6
FF:10174-103C3 60 years, female 308.2
Pons
Scaled Tags Per Million: 304.3
FF:10033-101E6 18-54 years, mixed 304.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 355.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 334.6
Samples: 4

Max nTPM: 393.9
Min nTPM: 276.2
Sample A Female 276.2
Sample B Female 282.5
Sample C Male 393.9
Sample D Male 385.6
Pons
nTPM: 355.5
Samples: 4

Max nTPM: 425.3
Min nTPM: 246.6
Sample A Female 376.9
Sample B Female 246.6
Sample C Male 425.3
Sample D Male 373.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 669.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 669.2
Samples: 4

Max nTPM: 749.5
Min nTPM: 567.8
Sample A Male 744.4
Sample B Male 567.8
Sample C Female 749.5
Sample D Female 614.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.7
74580990 Antisense, RP_060215_02_C09, Mouse strain C57BL/6J (56 days, male) 6.7
Pons
Expression energy: 5.8
74580990 Antisense, RP_060215_02_C09, Mouse strain C57BL/6J (56 days, male) 5.8

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