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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Cells in glomeruli:
Low
Cells in tubules:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
480.2
nTPM
HPA:
315.9
nTPM
GTEx:
480.2
nTPM
FANTOM5:
929.4
Scaled Tags Per Million
KIDNEY - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA004177
Antibody CAB006252
Cells in glomeruli
Low
Not detected
Cells in tubules
Medium
High
KIDNEY - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
315.9
Female, age 58
Kidney sample 55 nTPM: 489.1
Cell types%
Cells in tubules:
60
Cells in glomeruli:
20
Fibroblasts:
5
Other cell types:
15
Female, age 67
Kidney sample 56 nTPM: 418.9
Cell types%
Cells in tubules:
70
Cells in glomeruli:
15
Fibroblasts:
10
Other cell types:
5
Female, age 55
Kidney sample 57 nTPM: 477.4
Cell types%
Cells in tubules:
80
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
5
Male, age 46
Kidney sample 58 nTPM: 424.4
Cell types%
Cells in tubules:
60
Cells in glomeruli:
25
Fibroblasts:
5
Other cell types:
10
Female, age 57
Kidney sample 358 nTPM: 102.7
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Male, age 78
Kidney sample 377 nTPM: 187.7
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
20
Male, age 73
Kidney sample 380 nTPM: 389.5
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Female, age 59
Kidney sample 394 nTPM: 257.5
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
15
Female, age 48
Kidney sample 414 nTPM: 95.7
Cell types%
Cells in tubules:
60
Cells in glomeruli:
5
Fibroblasts:
10
Other cell types:
25
KIDNEY - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
480.2
GTEx sample id
Sample description
nTPM
Kidney - Cortex Average nTPM: 476.7
Samples: 85
Max nTPM: 1014.2
Min nTPM: 238.6
Std nTPM: 140.4
Median nTPM: 448.7
GTEX-1N2EF-1426-SM-EXUSH
60-69 years, male
1014.2
GTEX-11TTK-1926-SM-5PNW8
60-69 years, female
849.0
GTEX-REY6-1826-SM-EAZAT
60-69 years, male
749.1
GTEX-1PWST-2226-SM-EVR3G
70-79 years, male
745.4
GTEX-12696-0926-SM-5FQTV
60-69 years, male
706.0
GTEX-O5YV-1226-SM-EV795
60-69 years, female
703.1
GTEX-14C5O-2026-SM-5YYB1
60-69 years, male
694.8
GTEX-QLQW-1626-SM-CMKFE
30-39 years, male
693.9
GTEX-ZYFG-1626-SM-5GZYY
60-69 years, female
660.9
GTEX-1GMR3-2426-SM-7MXV2
40-49 years, male
658.2
GTEX-14C39-2126-SM-664OH
40-49 years, male
656.7
GTEX-Y5V6-2026-SM-5IFHO
60-69 years, male
653.0
GTEX-13O1R-2526-SM-5N9FW
60-69 years, male
635.6
GTEX-16MT8-1926-SM-7EPGL
60-69 years, female
620.9
GTEX-ZC5H-1726-SM-5HL7X
40-49 years, female
617.9
GTEX-13RTJ-2226-SM-5S2Q1
60-69 years, male
609.2
GTEX-14E6D-2526-SM-5YYA9
50-59 years, male
604.1
GTEX-1A3MW-2226-SM-73KUX
60-69 years, female
593.8
GTEX-1GN1U-2126-SM-AHZ4J
50-59 years, female
593.0
GTEX-1JJ6O-2526-SM-AHZ3J
60-69 years, male
574.7
GTEX-1GF9W-1326-SM-7P8PX
60-69 years, male
554.4
GTEX-1JMQK-1926-SM-CJI3B
60-69 years, male
544.1
GTEX-T6MN-1826-SM-EXOHN
50-59 years, male
539.3
GTEX-13NYB-1726-SM-5N9G2
40-49 years, male
529.4
GTEX-QDVN-1626-SM-48TZC
50-59 years, male
529.2
GTEX-12WSG-0826-SM-5EQ5A
50-59 years, female
528.7
GTEX-11GS4-2326-SM-5A5KS
60-69 years, male
512.0
GTEX-ZYT6-2226-SM-5GIC9
30-39 years, male
511.0
GTEX-1JMPZ-1226-SM-ARU8Y
30-39 years, male
508.2
GTEX-T5JC-1526-SM-4DM68
20-29 years, male
505.1
GTEX-1R9PO-1626-SM-E6CPT
60-69 years, female
502.7
GTEX-1E2YA-1626-SM-7MGXS
50-59 years, male
497.6
GTEX-1NV8Z-2226-SM-EXOJ2
60-69 years, male
492.3
GTEX-1K9T9-1826-SM-CXZK2
50-59 years, female
476.5
GTEX-ZVZP-0926-SM-5GIDB
50-59 years, male
475.2
GTEX-145MN-0326-SM-5QGQI
30-39 years, male
471.2
GTEX-1I1GP-1926-SM-CNNQU
50-59 years, male
463.8
GTEX-1OJC4-2326-SM-DTXA5
50-59 years, female
460.0
GTEX-1MUQO-2526-SM-E9TJN
60-69 years, male
458.3
GTEX-147F4-2626-SM-5Q5CS
50-59 years, male
456.9
GTEX-1497J-0826-SM-5NQAJ
60-69 years, male
452.6
GTEX-1EKGG-2226-SM-7IGOA
60-69 years, male
451.2
GTEX-1BAJH-1826-SM-731DA
70-79 years, male
448.7
GTEX-1JMLX-1526-SM-AHZ3N
50-59 years, male
448.5
GTEX-1CB4J-1926-SM-7MGX8
60-69 years, male
445.8
GTEX-1GTWX-1826-SM-9QEHG
60-69 years, male
435.8
GTEX-P4QS-1126-SM-3NMD5
60-69 years, male
434.3
GTEX-XPVG-0526-SM-4B65N
50-59 years, male
433.7
GTEX-1A8FM-2026-SM-7P8RN
50-59 years, female
429.4
GTEX-17F96-1926-SM-7MGWY
70-79 years, male
427.3
GTEX-17F97-1926-SM-7IGM4
50-59 years, male
426.4
GTEX-11OF3-1326-SM-5N9FJ
60-69 years, male
418.5
GTEX-1F48J-2226-SM-7MXTN
50-59 years, female
417.4
GTEX-1AX8Z-2326-SM-731CR
60-69 years, male
417.3
GTEX-ZLFU-0926-SM-5P9F8
40-49 years, male
416.0
GTEX-1GF9V-1926-SM-9JGHE
60-69 years, male
410.7
GTEX-1IKK5-0926-SM-A9G2U
60-69 years, male
408.0
GTEX-1KWVE-0826-SM-CXZKO
30-39 years, male
403.8
GTEX-1JMQJ-1726-SM-E9U4V
50-59 years, male
401.4
GTEX-1HBPI-2026-SM-CE6RZ
50-59 years, male
399.2
GTEX-1N2DW-1826-SM-EAZ54
50-59 years, male
384.0
GTEX-15DYW-2026-SM-6AJBD
60-69 years, female
382.7
GTEX-13112-2126-SM-5GCO4
50-59 years, male
375.2
GTEX-13OW6-1826-SM-5N9F9
50-59 years, male
375.1
GTEX-1H3VY-1926-SM-9JGHJ
50-59 years, male
369.1
GTEX-1HB9E-1826-SM-D4P33
50-59 years, male
367.4
GTEX-1J1OQ-1426-SM-AHZ3P
40-49 years, female
364.4
GTEX-13OVL-1826-SM-5KLZR
50-59 years, male
362.5
GTEX-ZDXO-0226-SM-4WKH7
60-69 years, male
359.6
GTEX-17HHY-2326-SM-7KFSR
50-59 years, male
357.9
GTEX-NPJ8-2226-SM-3TW8D
40-49 years, male
348.8
GTEX-Y5V5-1226-SM-EYYVP
60-69 years, female
346.7
GTEX-1399S-0526-SM-5IJG8
30-39 years, female
343.3
GTEX-1HCU7-1826-SM-A9G2A
50-59 years, male
342.9
GTEX-S33H-1426-SM-EZ6L7
30-39 years, male
342.5
GTEX-1C6VQ-2326-SM-7IGN1
50-59 years, male
341.8
GTEX-1QP6S-1526-SM-EXUSG
40-49 years, male
338.6
GTEX-1H3NZ-2126-SM-9WPQ6
60-69 years, male
327.0
GTEX-ZE9C-1426-SM-4WKGM
60-69 years, male
304.6
GTEX-15CHQ-2126-SM-6871M
60-69 years, male
300.4
GTEX-QDT8-1726-SM-EYYV6
30-39 years, female
276.6
GTEX-13OVI-1126-SM-5KLZF
60-69 years, female
272.9
GTEX-1LG7Y-2726-SM-D5OVW
50-59 years, male
268.0
GTEX-1IL2V-1826-SM-ARU7R
70-79 years, male
257.4
GTEX-RN64-1626-SM-48FD7
50-59 years, male
238.6
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Kidney - Medulla Average nTPM: 480.2
Samples: 4
Max nTPM: 600.9
Min nTPM: 361.0
Std nTPM: 101.5
Median nTPM: 479.5
GTEX-T5JC-1626-SM-EZ6KW
20-29 years, male
600.9
GTEX-RU72-1926-SM-EAZ3F
50-59 years, female
558.4
GTEX-TKQ2-0626-SM-EZ6LB
50-59 years, male
400.6
GTEX-R55E-2026-SM-EZ6L1
20-29 years, male
361.0
KIDNEY - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
