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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:189.0 nTPM
HPA Brain:418.6 nTPM
GTEx:189.0 nTPM
FANTOM5:407.1 Scaled Tags Per Million
Pig:80.4 nTPM
Mouse:47.6 nTPM
Allen mouse:0.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA030200
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

418.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 250.8
1854 Male, age 80, left hemisphere 283.6
2481 Female, age 94, left hemisphere 270.4
2289 Male, age 61, right hemisphere 267.1
1857 Female, age 85, left hemisphere 246.0
2846 Female, age 79, unknown 242.9
2288 Male, age 75, left hemisphere 241.4
2290 Female, age 72, unknown 235.9
1781 Male, age 74, unknown 218.8
Globus pallidus, externus
nTPM: 406.8
2567 Female, age 72, unknown 562.1
2646 Male, age 61, right hemisphere 434.0
1996 Male, age 80, right hemisphere 392.1
2772 Female, age 79, unknown 323.2
2395 Male, age 75, both hemispheres 322.5
Globus pallidus, internus
nTPM: 418.6
2566 Female, age 72, unknown 489.5
2111 Female, age 85, right hemisphere 478.8
2778 Female, age 91, both hemispheres 432.2
1818 Male, age 74, unknown 400.1
2483 Female, age 94, right hemisphere 390.5
2037 Male, age 80, right hemisphere 384.5
2287 Male, age 75, right hemisphere 354.4
Nucleus accumbens
nTPM: 273.3
2391 Female, age 94, left hemisphere 373.4
2698 Female, age 72, unknown 323.1
2732 Male, age 80, right hemisphere 289.3
2824 Male, age 61, right hemisphere 266.4
1806 Female, age 85, left hemisphere 254.1
2286 Male, age 75, left hemisphere 236.8
1783 Male, age 74, unknown 229.1
1856 Female, age 91, right hemisphere 214.1
Nucleus basalis of Meynert
nTPM: 316.6
2569 Male, age 61, both hemispheres 446.9
2393 Male, age 80, right hemisphere 291.2
2821 Male, age 75, both hemispheres 267.0
2484 Female, age 94, left hemisphere 261.4
Nucleus of the diagonal band
nTPM: 200.9
1812 Female, age 91, both hemispheres 214.3
1979 Male, age 74, unknown 210.7
2775 Male, age 80, right hemisphere 205.3
2195 Female, age 85, both hemispheres 187.5
2029 Male, age 61, right hemisphere 186.8
Putamen
nTPM: 281.9
2647 Male, age 75, left hemisphere 346.8
2482 Female, age 94, left hemisphere 321.6
2489 Female, age 72, unknown 303.8
1829 Male, age 74, unknown 293.3
1838 Male, age 80, right hemisphere 255.0
1937 Female, age 91, right hemisphere 243.9
2466 Female, age 79, unknown 209.1
Septal nuclei
nTPM: 222.3
2199 Male, age 80, right hemisphere 281.8
2394 Male, age 61, left hemisphere 277.4
2629 Female, age 94, right hemisphere 238.6
2059 Female, age 85, both hemispheres 213.3
2009 Female, age 91, both hemispheres 196.3
1960 Male, age 74, unknown 179.8
2031 Female, age 72, unknown 168.8
Stria terminalis, bed nucleus
nTPM: 217.9
2201 Male, age 74, unknown 235.3
1974 Female, age 91, both hemispheres 214.8
2486 Female, age 94, both hemispheres 203.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

189.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 172.9
Samples: 246

Max nTPM: 329.0
Min nTPM: 94.5
Std nTPM: 39.2
Median nTPM: 169.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 329.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 303.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 296.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 283.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 275.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 275.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 268.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 266.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 254.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 252.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 250.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 249.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 248.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 241.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 241.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 241.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 239.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 234.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 233.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 228.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 228.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 227.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 226.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 225.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 224.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 222.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 221.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 221.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 218.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 217.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 217.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 213.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 213.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 213.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 212.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 211.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 211.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 210.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 209.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 209.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 208.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 207.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 206.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 204.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 204.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 203.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 203.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 202.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 199.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 198.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 198.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 197.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 197.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 195.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 195.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 195.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 194.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 194.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 194.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 194.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 193.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 193.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 193.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 191.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 190.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 190.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 190.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 190.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 189.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 189.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 188.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 188.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 187.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 186.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 185.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 185.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 185.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 184.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 184.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 184.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 184.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 183.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 183.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 183.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 183.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 181.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 181.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 181.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 181.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 181.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 180.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 179.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 179.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 179.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 179.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 179.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 179.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 178.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 177.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 177.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 175.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 175.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 175.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 175.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 174.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 174.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 174.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 174.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 174.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 174.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 173.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 173.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 173.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 172.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 172.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 172.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 172.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 172.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 171.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 170.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 170.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 170.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 169.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 169.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 168.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 167.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 167.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 165.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 165.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 165.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 165.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 164.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 164.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 164.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 163.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 163.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 163.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 163.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 162.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 162.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 161.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 161.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 160.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 160.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 160.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 159.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 159.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 159.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 159.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 159.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 158.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 158.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 157.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 157.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 156.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 156.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 156.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 156.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 156.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 156.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 155.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 155.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 154.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 154.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 154.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 154.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 153.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 153.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 153.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 152.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 152.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 152.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 152.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 151.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 151.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 150.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 149.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 149.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 148.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 147.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 147.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 146.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 146.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 145.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 145.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 144.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 144.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 144.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 143.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 143.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 143.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 141.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 141.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 141.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 140.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 140.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 138.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 138.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 138.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 138.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 138.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 137.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 137.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 137.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 136.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 136.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 136.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 135.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 135.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 135.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 134.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 134.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 134.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 133.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 131.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 130.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 130.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 129.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 129.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 128.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 127.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 127.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 127.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 127.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 126.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 126.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 126.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 125.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 124.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 123.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 123.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 123.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 120.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 118.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 118.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 116.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 115.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 112.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 109.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 107.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 103.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 102.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 102.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 100.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 95.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 94.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 169.4
Samples: 246

Max nTPM: 455.3
Min nTPM: 91.0
Std nTPM: 45.5
Median nTPM: 157.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 455.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 309.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 307.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 289.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 288.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 284.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 279.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 270.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 270.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 267.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 262.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 261.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 258.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 255.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 254.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 249.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 248.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 244.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 241.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 240.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 239.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 237.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 234.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 230.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 228.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 227.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 227.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 224.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 222.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 222.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 221.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 220.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 219.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 219.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 218.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 218.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 215.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 213.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 212.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 211.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 210.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 210.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 209.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 207.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 207.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 205.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 204.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 202.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 199.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 197.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 197.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 196.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 195.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 195.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 194.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 190.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 189.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 189.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 188.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 188.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 187.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 186.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 185.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 185.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 185.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 184.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 184.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 183.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 183.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 182.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 182.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 182.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 180.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 180.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 180.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 179.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 179.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 178.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 178.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 177.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 177.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 176.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 176.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 175.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 174.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 174.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 173.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 172.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 172.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 171.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 171.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 171.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 170.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 170.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 170.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 170.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 169.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 169.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 169.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 168.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 168.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 167.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 167.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 167.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 167.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 166.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 165.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 164.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 164.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 164.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 164.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 164.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 163.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 162.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 162.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 162.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 162.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 162.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 159.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 158.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 157.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 157.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 157.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 157.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 156.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 156.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 156.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 156.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 155.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 155.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 154.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 154.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 153.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 153.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 153.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 153.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 152.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 151.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 151.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 151.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 151.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 151.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 150.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 150.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 150.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 150.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 150.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 150.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 150.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 150.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 150.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 149.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 148.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 147.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 147.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 147.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 146.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 146.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 146.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 146.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 145.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 145.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 145.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 145.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 145.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 145.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 145.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 145.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 144.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 144.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 143.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 143.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 143.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 143.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 143.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 143.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 142.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 141.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 141.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 141.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 141.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 140.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 140.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 139.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 139.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 139.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 139.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 139.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 139.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 139.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 137.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 136.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 136.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 135.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 135.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 134.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 134.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 133.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 133.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 133.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 133.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 133.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 132.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 132.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 132.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 132.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 131.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 131.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 131.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 131.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 131.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 130.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 130.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 128.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 128.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 128.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 127.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 127.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 127.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 127.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 126.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 126.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 123.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 123.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 122.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 121.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 120.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 120.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 120.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 119.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 118.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 118.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 117.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 117.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 117.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 116.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 116.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 113.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 111.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 108.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 107.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 105.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 104.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 100.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 97.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 91.0
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Brain - Putamen (basal ganglia)
Average nTPM: 189.0
Samples: 205

Max nTPM: 335.1
Min nTPM: 104.0
Std nTPM: 41.6
Median nTPM: 181.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 335.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 323.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 308.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 303.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 297.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 291.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 285.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 283.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 278.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 278.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 276.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 267.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 257.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 256.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 254.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 251.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 251.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 250.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 250.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 249.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 249.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 247.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 246.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 246.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 244.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 237.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 237.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 236.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 236.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 235.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 235.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 234.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 233.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 232.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 226.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 225.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 224.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 223.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 222.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 222.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 222.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 221.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 218.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 215.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 213.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 213.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 213.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 211.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 210.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 210.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 209.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 208.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 208.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 207.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 206.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 206.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 205.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 205.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 204.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 204.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 203.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 202.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 202.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 202.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 199.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 199.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 199.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 197.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 197.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 197.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 196.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 196.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 195.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 194.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 194.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 193.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 193.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 193.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 193.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 192.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 192.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 191.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 191.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 190.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 190.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 189.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 189.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 189.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 189.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 188.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 188.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 187.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 187.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 187.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 186.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 186.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 185.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 184.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 183.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 183.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 183.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 182.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 181.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 180.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 180.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 180.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 180.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 179.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 179.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 179.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 178.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 178.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 177.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 175.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 175.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 174.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 174.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 173.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 173.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 173.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 172.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 172.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 172.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 171.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 171.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 171.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 170.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 170.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 169.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 169.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 169.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 168.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 168.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 168.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 167.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 166.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 166.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 166.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 165.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 165.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 165.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 164.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 164.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 164.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 162.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 162.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 161.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 160.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 160.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 160.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 160.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 159.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 159.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 159.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 158.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 158.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 158.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 158.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 157.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 157.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 157.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 156.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 154.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 154.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 153.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 153.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 153.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 152.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 152.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 152.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 152.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 151.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 150.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 150.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 150.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 149.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 149.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 148.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 147.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 147.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 147.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 146.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 144.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 144.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 144.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 143.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 142.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 142.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 142.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 141.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 141.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 140.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 139.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 139.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 138.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 137.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 136.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 128.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 125.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 124.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 121.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 120.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 117.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 116.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 104.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

407.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 358.3
FF:10164-103B2 76 years, female 358.3
Nucleus accumbens
Scaled Tags Per Million: 164.1
FF:10037-101F1 23-56 years, mixed 164.1
Putamen
Scaled Tags Per Million: 299.3
FF:10176-103C5 60 years, female 299.3
Globus pallidus
Scaled Tags Per Million: 407.1
FF:10161-103A8 76 years, female 436.0
FF:10175-103C4 60 years, female 378.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.4
Pig sample Sample description nTPM
Caudate
nTPM: 58.9
Samples: 4

Max nTPM: 66.4
Min nTPM: 51.5
Sample A Female 51.5
Sample B Female 55.3
Sample C Male 66.4
Sample D Male 62.3
Putamen
nTPM: 76.4
Samples: 4

Max nTPM: 89.6
Min nTPM: 59.8
Sample A Female 89.6
Sample B Female 59.8
Sample C Male 76.2
Sample D Male 80.1
Septum
nTPM: 69.6
Samples: 4

Max nTPM: 82.8
Min nTPM: 63.3
Sample A Female 64.3
Sample B Female 63.3
Sample C Male 82.8
Sample D Male 67.9
Ventral pallidum
nTPM: 80.4
Samples: 4

Max nTPM: 109.1
Min nTPM: 62.1
Sample A Female 62.7
Sample B Female 62.1
Sample C Male 109.1
Sample D Male 87.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 47.6
Samples: 4

Max nTPM: 50.9
Min nTPM: 44.2
Sample A Male 46.6
Sample B Male 48.6
Sample C Female 50.9
Sample D Female 44.2
Septum
nTPM: 29.8
Samples: 4

Max nTPM: 37.5
Min nTPM: 20.2
Sample A Male 37.5
Sample B Male 20.2
Sample C Female 24.8
Sample D Female 36.6
Ventral forebrain
nTPM: 38.8
Samples: 4

Max nTPM: 40.8
Min nTPM: 34.5
Sample A Male 39.9
Sample B Male 40.8
Sample C Female 34.5
Sample D Female 39.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
70238943 Antisense, RP_050526_04_E02, Mouse strain C57BL/6J (56 days, male) 0.2
73834445 Antisense, RP_051212_03_H11, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.1
70238943 Antisense, RP_050526_04_E02, Mouse strain C57BL/6J (56 days, male) 0.2
73834445 Antisense, RP_051212_03_H11, Mouse strain C57BL/6J (56 days, male) 0.0

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