HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:94.6 nTPM
HPA Brain:146.7 nTPM
GTEx:94.6 nTPM
FANTOM5:166.3 Scaled Tags Per Million
Pig:83.4 nTPM
Mouse:28.7 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015876
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 146.7
Sample id Sample description nTPM
Hippocampus
nTPM: 146.7
2148 Female, age 91, left hemisphere 183.2
2529 Female, age 94, left hemisphere 168.3
1898 Male, age 80, left hemisphere 156.5
1911 Female, age 85, right hemisphere 138.8
1855 Male, age 76, left hemisphere 132.4
2621 Female, age 67, right hemisphere 101.3
Dentate gyrus
nTPM: 132.0
2528 Male, age 74, both hemispheres 238.9
2530 Female, age 94, left hemisphere 127.0
2010 Male, age 76, both hemispheres 124.4
2246 Female, age 85, both hemispheres 122.5
1927 Female, age 91, both hemispheres 90.3
2531 Female, age 67, both hemispheres 88.7
Entorhinal gyrus
nTPM: 111.0
2117 Female, age 91, right hemisphere 219.8
1787 Male, age 76, left hemisphere 113.0
2686 Male, age 75, right hemisphere 94.8
2764 Male, age 80, right hemisphere 85.9
1938 Female, age 85, left hemisphere 85.1
2613 Female, age 94, left hemisphere 67.6
Hippocampus, CA1
nTPM: 118.3
2527 Male, age 74, both hemispheres 168.9
2082 Female, age 91, right hemisphere 152.8
1873 Female, age 85, both hemispheres 126.2
2045 Male, age 76, both hemispheres 90.2
2749 Male, age 80, left hemisphere 53.4
Hippocampus, CA2
nTPM: 137.7
2249 Male, age 74, both hemispheres 242.4
2113 Female, age 91, right hemisphere 160.6
1940 Female, age 85, left hemisphere 159.9
1963 Male, age 80, left hemisphere 108.2
2437 Female, age 94, left hemisphere 94.9
1892 Male, age 76, both hemispheres 60.4
Hippocampus, CA3
nTPM: 111.7
2436 Male, age 74, both hemispheres 175.2
1891 Female, age 85, both hemispheres 129.9
2620 Female, age 94, left hemisphere 127.6
2861 Female, age 67, both hemispheres 90.6
1867 Male, age 76, both hemispheres 79.5
2137 Male, age 80, left hemisphere 67.6
Parahippocampal cortex
nTPM: 97.0
2250 Female, age 67, right hemisphere 120.8
2692 Male, age 74, both hemispheres 114.2
2018 Male, age 76, both hemispheres 112.2
1990 Female, age 91, right hemisphere 112.1
2245 Female, age 91, both hemispheres 106.7
2622 Female, age 67, right hemisphere 92.2
1933 Female, age 85, both hemispheres 87.5
1850 Male, age 80, both hemispheres 83.4
2532 Female, age 72, left hemisphere 73.7
2693 Female, age 94, both hemispheres 67.3
Perirhinal gyrus
nTPM: 85.1
2848 Male, age 76, right hemisphere 93.8
1847 Female, age 91, left hemisphere 91.1
1794 Male, age 80, right hemisphere 80.8
1841 Female, age 85, right hemisphere 80.8
2521 Female, age 94, right hemisphere 78.9
Subiculum
nTPM: 132.1
2729 Female, age 91, right hemisphere 235.0
2619 Male, age 74, both hemispheres 146.9
2042 Male, age 76, both hemispheres 121.1
1901 Male, age 80, both hemispheres 105.2
1977 Female, age 85, both hemispheres 94.2
2438 Female, age 94, left hemisphere 90.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 94.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 94.6
Samples: 197

Max nTPM: 369.7
Min nTPM: 28.2
Std nTPM: 47.6
Median nTPM: 85.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 369.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 274.6
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 257.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 233.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 224.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 223.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 201.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 182.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 177.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 174.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 166.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 166.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 166.3
FF:10153-102I9 76 years, female 216.3
FF:10169-103B7 60 years, female 116.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 83.4
Pig sample Sample description nTPM
Subiculum
nTPM: 80.4
Samples: 4

Max nTPM: 88.9
Min nTPM: 67.1
Sample A Female 87.2
Sample B Female 67.1
Sample C Male 88.9
Sample D Male 78.5
Dorsal hippocampus
nTPM: 71.4
Samples: 4

Max nTPM: 84.9
Min nTPM: 55.7
Sample A Female 80.9
Sample B Female 64.0
Sample C Male 84.9
Sample D Male 55.7
Entorhinal cortex
nTPM: 83.4
Samples: 4

Max nTPM: 91.9
Min nTPM: 75.3
Sample A Female 91.9
Sample B Female 86.8
Sample C Male 79.4
Sample D Male 75.3
Ventral hippocampus
nTPM: 80.3
Samples: 4

Max nTPM: 105.2
Min nTPM: 64.3
Sample A Female 76.4
Sample B Female 64.3
Sample C Male 105.2
Sample D Male 75.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 28.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 29.6
Min nTPM: 20.9
Sample A Male 20.9
Sample B Male 21.4
Sample C Female 29.0
Sample D Female 29.6
Hippocampal formation
nTPM: 28.7
Samples: 4

Max nTPM: 38.2
Min nTPM: 21.5
Sample A Male 25.5
Sample B Male 21.5
Sample C Female 29.6
Sample D Female 38.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68302203 Antisense, RP_041130_02_D06, Mouse strain C57BL/6J (56 days, male) 1.5
77454961 Antisense, RP_070129_01_E04, Mouse strain C57BL/6J (56 days, male) 0.6
77866850 Antisense, RP_070129_01_E04, Mouse strain C57BL/6J (56 days, male) 0.2
1181 Antisense, RP_Baylor_103301, Mouse strain C57BL/6J (56 days, male) 0.0

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