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GJA1
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  • GJA1
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:247.1 nTPM
HPA Brain:399.5 nTPM
GTEx:247.1 nTPM
FANTOM5:403.9 Scaled Tags Per Million
Pig:199.4 nTPM
Mouse:0.1 nTPM
Allen mouse:0.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA035097Antibody CAB010753
Glial cells HighMedium
Neuronal cells Not detectedMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

399.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 316.1
2481 Female, age 94, left hemisphere 500.1
2288 Male, age 75, left hemisphere 379.9
1857 Female, age 85, left hemisphere 375.5
2289 Male, age 61, right hemisphere 325.2
2290 Female, age 72, unknown 299.9
1854 Male, age 80, left hemisphere 266.1
1781 Male, age 74, unknown 191.8
2846 Female, age 79, unknown 190.4
Globus pallidus, externus
nTPM: 399.5
2646 Male, age 61, right hemisphere 587.2
1996 Male, age 80, right hemisphere 544.0
2772 Female, age 79, unknown 397.2
2395 Male, age 75, both hemispheres 291.7
2567 Female, age 72, unknown 177.3
Globus pallidus, internus
nTPM: 368.0
2483 Female, age 94, right hemisphere 608.4
2037 Male, age 80, right hemisphere 508.4
1818 Male, age 74, unknown 500.1
2287 Male, age 75, right hemisphere 296.5
2778 Female, age 91, both hemispheres 288.0
2111 Female, age 85, right hemisphere 204.4
2566 Female, age 72, unknown 170.1
Nucleus accumbens
nTPM: 271.0
2286 Male, age 75, left hemisphere 370.3
1806 Female, age 85, left hemisphere 290.3
2698 Female, age 72, unknown 281.4
2732 Male, age 80, right hemisphere 274.4
2824 Male, age 61, right hemisphere 268.8
2391 Female, age 94, left hemisphere 266.4
1856 Female, age 91, right hemisphere 237.2
1783 Male, age 74, unknown 179.2
Nucleus basalis of Meynert
nTPM: 335.8
2569 Male, age 61, both hemispheres 654.1
2393 Male, age 80, right hemisphere 255.7
2484 Female, age 94, left hemisphere 254.7
2821 Male, age 75, both hemispheres 178.9
Nucleus of the diagonal band
nTPM: 288.7
1812 Female, age 91, both hemispheres 364.3
2775 Male, age 80, right hemisphere 294.4
1979 Male, age 74, unknown 287.5
2195 Female, age 85, both hemispheres 250.3
2029 Male, age 61, right hemisphere 246.8
Putamen
nTPM: 246.2
2482 Female, age 94, left hemisphere 370.8
1829 Male, age 74, unknown 272.1
1838 Male, age 80, right hemisphere 236.6
2647 Male, age 75, left hemisphere 236.4
1937 Female, age 91, right hemisphere 232.1
2466 Female, age 79, unknown 198.8
2489 Female, age 72, unknown 176.7
Septal nuclei
nTPM: 308.2
2199 Male, age 80, right hemisphere 397.8
2059 Female, age 85, both hemispheres 384.1
2629 Female, age 94, right hemisphere 321.4
2009 Female, age 91, both hemispheres 319.0
2394 Male, age 61, left hemisphere 298.9
2031 Female, age 72, unknown 221.2
1960 Male, age 74, unknown 214.7
Stria terminalis, bed nucleus
nTPM: 249.0
2201 Male, age 74, unknown 287.6
2486 Female, age 94, both hemispheres 238.5
1974 Female, age 91, both hemispheres 220.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

247.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 247.1
Samples: 246

Max nTPM: 758.6
Min nTPM: 19.1
Std nTPM: 127.5
Median nTPM: 222.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 758.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 739.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 649.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 643.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 627.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 584.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 576.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 575.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 562.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 556.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 543.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 538.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 523.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 515.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 501.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 490.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 450.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 438.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 421.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 413.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 408.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 403.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 400.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 398.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 397.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 397.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 390.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 386.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 380.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 380.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 375.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 375.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 375.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 374.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 371.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 370.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 368.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 366.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 364.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 364.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 359.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 357.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 351.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 344.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 343.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 342.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 339.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 339.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 338.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 337.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 333.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 331.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 328.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 328.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 325.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 320.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 318.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 316.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 316.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 315.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 311.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 308.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 306.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 303.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 303.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 301.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 300.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 296.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 294.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 291.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 282.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 280.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 278.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 278.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 277.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 274.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 274.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 273.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 273.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 271.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 271.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 269.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 268.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 268.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 268.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 267.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 266.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 265.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 265.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 263.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 262.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 260.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 259.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 257.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 257.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 257.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 256.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 255.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 255.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 253.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 250.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 249.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 249.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 247.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 247.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 246.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 244.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 240.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 240.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 235.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 233.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 233.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 233.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 232.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 231.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 231.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 231.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 230.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 229.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 227.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 227.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 226.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 223.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 221.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 220.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 218.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 218.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 217.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 217.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 216.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 215.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 214.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 212.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 211.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 210.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 208.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 206.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 206.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 206.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 202.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 202.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 200.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 198.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 198.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 197.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 197.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 197.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 195.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 194.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 194.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 193.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 192.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 192.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 191.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 189.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 188.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 187.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 187.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 185.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 184.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 183.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 183.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 183.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 182.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 182.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 181.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 181.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 180.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 180.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 179.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 177.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 177.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 175.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 175.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 173.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 173.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 170.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 170.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 169.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 168.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 167.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 163.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 162.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 162.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 160.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 159.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 158.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 158.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 156.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 156.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 155.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 153.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 153.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 153.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 151.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 147.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 146.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 145.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 142.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 141.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 141.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 141.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 138.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 137.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 135.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 133.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 132.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 132.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 131.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 131.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 129.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 129.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 129.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 128.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 127.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 126.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 125.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 122.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 122.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 120.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 117.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 113.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 111.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 109.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 106.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 103.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 101.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 96.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 94.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 93.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 92.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 90.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 89.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 88.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 84.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 83.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 73.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 73.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 73.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 71.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 64.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 55.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 44.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 24.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 24.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 19.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 208.5
Samples: 246

Max nTPM: 995.5
Min nTPM: 40.1
Std nTPM: 115.7
Median nTPM: 180.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 995.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 707.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 584.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 522.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 490.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 486.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 476.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 476.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 450.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 445.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 441.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 440.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 425.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 417.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 417.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 406.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 404.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 390.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 385.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 382.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 375.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 364.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 357.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 353.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 348.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 347.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 345.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 341.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 336.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 333.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 323.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 322.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 321.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 320.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 319.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 318.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 308.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 306.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 305.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 304.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 304.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 301.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 301.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 301.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 297.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 297.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 292.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 289.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 287.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 275.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 274.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 270.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 269.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 269.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 266.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 262.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 259.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 258.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 256.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 256.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 254.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 254.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 252.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 250.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 248.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 244.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 244.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 239.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 238.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 238.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 233.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 232.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 231.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 231.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 229.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 228.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 227.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 226.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 226.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 224.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 221.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 221.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 220.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 219.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 217.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 213.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 212.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 209.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 208.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 207.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 205.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 203.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 203.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 203.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 203.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 202.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 202.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 202.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 201.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 198.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 195.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 193.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 193.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 192.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 191.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 190.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 190.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 189.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 189.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 189.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 188.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 188.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 187.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 187.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 187.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 186.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 186.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 185.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 185.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 181.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 181.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 181.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 180.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 180.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 179.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 176.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 176.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 175.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 174.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 173.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 173.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 172.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 172.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 172.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 172.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 172.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 172.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 171.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 171.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 168.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 168.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 168.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 168.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 167.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 167.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 164.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 163.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 163.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 161.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 161.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 161.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 160.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 160.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 160.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 159.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 158.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 156.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 156.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 154.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 154.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 153.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 152.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 151.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 151.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 151.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 150.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 149.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 149.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 148.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 148.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 148.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 148.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 147.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 147.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 147.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 145.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 145.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 144.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 142.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 142.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 140.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 140.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 139.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 139.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 139.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 136.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 135.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 135.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 134.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 133.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 133.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 132.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 132.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 130.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 130.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 130.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 129.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 129.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 128.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 128.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 127.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 126.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 125.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 123.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 122.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 122.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 120.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 119.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 118.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 115.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 113.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 112.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 110.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 110.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 109.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 109.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 105.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 105.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 104.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 102.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 98.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 96.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 96.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 95.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 93.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 89.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 88.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 87.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 86.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 81.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 80.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 79.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 78.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 75.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 70.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 70.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 67.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 66.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 65.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 59.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 52.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 50.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 50.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 50.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 43.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 40.1
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Brain - Putamen (basal ganglia)
Average nTPM: 191.7
Samples: 205

Max nTPM: 633.2
Min nTPM: 16.0
Std nTPM: 106.5
Median nTPM: 180.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 633.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 611.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 544.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 489.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 466.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 446.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 397.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 390.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 388.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 380.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 378.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 375.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 371.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 358.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 353.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 353.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 350.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 344.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 342.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 339.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 332.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 327.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 325.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 323.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 314.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 308.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 305.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 303.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 303.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 297.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 289.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 289.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 287.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 285.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 282.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 281.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 279.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 279.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 275.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 266.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 266.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 265.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 264.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 263.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 262.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 260.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 257.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 256.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 254.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 247.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 244.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 243.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 242.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 241.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 240.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 240.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 235.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 234.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 231.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 229.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 228.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 226.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 225.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 222.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 222.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 222.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 217.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 216.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 212.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 211.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 210.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 210.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 210.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 209.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 208.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 208.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 208.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 207.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 207.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 207.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 206.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 204.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 203.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 202.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 201.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 201.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 196.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 195.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 195.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 195.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 192.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 190.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 189.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 189.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 187.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 184.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 184.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 183.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 182.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 182.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 181.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 180.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 180.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 179.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 176.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 176.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 174.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 174.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 172.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 171.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 170.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 170.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 167.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 166.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 165.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 162.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 162.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 159.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 157.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 156.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 155.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 153.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 153.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 152.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 150.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 148.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 147.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 147.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 146.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 146.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 145.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 142.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 142.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 140.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 140.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 136.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 136.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 136.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 135.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 134.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 130.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 130.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 130.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 130.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 129.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 127.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 127.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 125.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 122.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 122.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 121.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 120.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 120.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 117.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 115.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 114.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 110.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 110.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 107.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 105.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 105.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 104.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 103.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 101.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 101.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 100.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 100.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 98.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 96.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 95.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 94.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 94.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 93.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 93.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 92.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 91.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 89.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 89.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 85.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 84.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 83.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 82.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 80.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 80.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 78.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 75.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 72.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 59.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 57.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 55.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 54.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 53.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 49.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 49.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 45.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 35.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 35.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 33.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 31.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 30.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 28.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 19.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 16.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 16.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 16.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

403.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 403.9
FF:10164-103B2 76 years, female 403.9
Nucleus accumbens
Scaled Tags Per Million: 82.1
FF:10037-101F1 23-56 years, mixed 82.1
Putamen
Scaled Tags Per Million: 165.4
FF:10176-103C5 60 years, female 165.4
Globus pallidus
Scaled Tags Per Million: 193.3
FF:10161-103A8 76 years, female 204.5
FF:10175-103C4 60 years, female 182.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

199.4
Pig sample Sample description nTPM
Caudate
nTPM: 158.4
Samples: 4

Max nTPM: 189.2
Min nTPM: 141.4
Sample A Female 149.8
Sample B Female 153.1
Sample C Male 189.2
Sample D Male 141.4
Putamen
nTPM: 162.4
Samples: 4

Max nTPM: 184.0
Min nTPM: 137.9
Sample A Female 184.0
Sample B Female 144.3
Sample C Male 183.3
Sample D Male 137.9
Septum
nTPM: 199.5
Samples: 4

Max nTPM: 263.6
Min nTPM: 157.4
Sample A Female 157.4
Sample B Female 175.4
Sample C Male 201.4
Sample D Male 263.6
Ventral pallidum
nTPM: 161.5
Samples: 4

Max nTPM: 188.6
Min nTPM: 135.2
Sample A Female 135.2
Sample B Female 188.6
Sample C Male 181.4
Sample D Male 140.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.1
Sample C Female 0.0
Sample D Female 0.1
Septum
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.1
Sample C Female 0.0
Sample D Female 0.0
Ventral forebrain
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.1
Sample C Female 0.2
Sample D Female 0.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
69257331 Antisense, RP_050331_02_D01, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.1
69257331 Antisense, RP_050331_02_D01, Mouse strain C57BL/6J (56 days, male) 0.1

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