HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		97.824
RNA expressioni
Consensus:126.0 nTPM
HPA Brain:324.3 nTPM
GTEx:126.0 nTPM
FANTOM5:386.4 Scaled Tags Per Million
Pig:272.8 nTPM
Mouse:0.1 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035097Antibody CAB010753
Glial cells HighMedium
Neuronal cells Not detectedMedium




HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA069245
Hippocampal formation mean intensity 97.824
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 66.781
Molecular layer of the dentate gyrus 51.753
Granular dentate gyrus 20.742
CA1 - oriens layer 53.691
CA1 - pyramidal layer 44.287
CA1 - radiatum layer 55.748
CA2 - oriens layer 67.311
CA2 - pyramidal layer 60.313
CA2 - radiatum layer 70.679
CA3 - oriens layer 58.928
CA3 - pyramidal layer 33.796
CA3 - radiatum layer 78.254
Stratum lucidum 38.040
Lacunosum moleculare 71.020
Subiculum 48.820

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 324.3
Sample id Sample description nTPM
Hippocampus
nTPM: 324.3
1855 Male, age 76, left hemisphere 380.1
2529 Female, age 94, left hemisphere 365.7
2148 Female, age 91, left hemisphere 359.2
1898 Male, age 80, left hemisphere 311.2
1911 Female, age 85, right hemisphere 295.4
2621 Female, age 67, right hemisphere 234.5
Dentate gyrus
nTPM: 239.9
2528 Male, age 74, both hemispheres 355.3
2246 Female, age 85, both hemispheres 305.8
2010 Male, age 76, both hemispheres 255.1
1927 Female, age 91, both hemispheres 200.5
2530 Female, age 94, left hemisphere 189.3
2531 Female, age 67, both hemispheres 133.4
Entorhinal gyrus
nTPM: 225.9
2117 Female, age 91, right hemisphere 366.8
1938 Female, age 85, left hemisphere 287.6
1787 Male, age 76, left hemisphere 226.5
2764 Male, age 80, right hemisphere 192.3
2686 Male, age 75, right hemisphere 161.2
2613 Female, age 94, left hemisphere 121.0
Hippocampus, CA1
nTPM: 274.9
2527 Male, age 74, both hemispheres 384.2
1873 Female, age 85, both hemispheres 315.7
2082 Female, age 91, right hemisphere 307.8
2045 Male, age 76, both hemispheres 234.5
2749 Male, age 80, left hemisphere 132.1
Hippocampus, CA2
nTPM: 279.8
2249 Male, age 74, both hemispheres 453.9
2113 Female, age 91, right hemisphere 342.6
1940 Female, age 85, left hemisphere 335.2
2437 Female, age 94, left hemisphere 200.7
1963 Male, age 80, left hemisphere 179.6
1892 Male, age 76, both hemispheres 166.6
Hippocampus, CA3
nTPM: 233.8
2436 Male, age 74, both hemispheres 332.0
1891 Female, age 85, both hemispheres 278.8
2620 Female, age 94, left hemisphere 245.1
1867 Male, age 76, both hemispheres 213.8
2861 Female, age 67, both hemispheres 173.7
2137 Male, age 80, left hemisphere 159.6
Parahippocampal cortex
nTPM: 260.4
2250 Female, age 67, right hemisphere 316.5
1933 Female, age 85, both hemispheres 311.2
2692 Male, age 74, both hemispheres 284.9
1850 Male, age 80, both hemispheres 283.4
2622 Female, age 67, right hemisphere 271.7
2018 Male, age 76, both hemispheres 270.8
2245 Female, age 91, both hemispheres 249.7
1990 Female, age 91, right hemisphere 242.7
2693 Female, age 94, both hemispheres 208.5
2532 Female, age 72, left hemisphere 164.8
Perirhinal gyrus
nTPM: 264.2
1794 Male, age 80, right hemisphere 308.7
1847 Female, age 91, left hemisphere 299.1
1841 Female, age 85, right hemisphere 287.3
2521 Female, age 94, right hemisphere 258.7
2848 Male, age 76, right hemisphere 167.2
Subiculum
nTPM: 296.6
2729 Female, age 91, right hemisphere 486.7
2619 Male, age 74, both hemispheres 372.3
2438 Female, age 94, left hemisphere 266.7
2042 Male, age 76, both hemispheres 232.6
1977 Female, age 85, both hemispheres 225.8
1901 Male, age 80, both hemispheres 195.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 126.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 126.0
Samples: 197

Max nTPM: 449.4
Min nTPM: 23.6
Std nTPM: 74.7
Median nTPM: 107.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 449.4
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 388.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 379.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 313.6
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 302.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 296.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 295.1
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 293.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 283.2
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 271.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 270.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 386.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 386.4
FF:10153-102I9 76 years, female 552.8
FF:10169-103B7 60 years, female 220.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 272.8
Pig sample Sample description nTPM
Subiculum
nTPM: 272.8
Samples: 4

Max nTPM: 316.4
Min nTPM: 236.3
Sample A Female 316.4
Sample B Female 290.0
Sample C Male 248.5
Sample D Male 236.3
Dorsal hippocampus
nTPM: 236.2
Samples: 4

Max nTPM: 260.6
Min nTPM: 213.5
Sample A Female 245.3
Sample B Female 225.3
Sample C Male 260.6
Sample D Male 213.5
Entorhinal cortex
nTPM: 198.8
Samples: 4

Max nTPM: 219.0
Min nTPM: 153.8
Sample A Female 208.6
Sample B Female 213.7
Sample C Male 219.0
Sample D Male 153.8
Ventral hippocampus
nTPM: 236.8
Samples: 4

Max nTPM: 261.3
Min nTPM: 206.6
Sample A Female 221.2
Sample B Female 258.2
Sample C Male 261.3
Sample D Male 206.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 0.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.2
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Male 0.2
Sample B Male 0.3
Sample C Female 0.2
Sample D Female 0.0
Hippocampal formation
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.1
Sample B Male 0.1
Sample C Female 0.0
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69257331 Antisense, RP_050331_02_D01, Mouse strain C57BL/6J (56 days, male) 0.2

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