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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:196.4 nTPM
HPA Brain:233.3 nTPM
GTEx:196.4 nTPM
FANTOM5:540.7 Scaled Tags Per Million
Pig:131.9 nTPM
Mouse:82.0 nTPM
Allen mouse:5.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA056820Antibody HPA063147
Glial cells HighLow
Neuronal cells HighMedium




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

233.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 192.7
2846 Female, age 79, unknown 210.2
2481 Female, age 94, left hemisphere 203.3
1854 Male, age 80, left hemisphere 197.5
1781 Male, age 74, unknown 194.4
2288 Male, age 75, left hemisphere 191.0
1857 Female, age 85, left hemisphere 183.2
2289 Male, age 61, right hemisphere 183.1
2290 Female, age 72, unknown 179.0
Globus pallidus, externus
nTPM: 224.9
2567 Female, age 72, unknown 260.8
2646 Male, age 61, right hemisphere 231.9
1996 Male, age 80, right hemisphere 220.7
2395 Male, age 75, both hemispheres 217.3
2772 Female, age 79, unknown 194.1
Globus pallidus, internus
nTPM: 233.3
2287 Male, age 75, right hemisphere 260.7
2111 Female, age 85, right hemisphere 251.0
2566 Female, age 72, unknown 240.4
2778 Female, age 91, both hemispheres 235.2
2483 Female, age 94, right hemisphere 227.1
2037 Male, age 80, right hemisphere 217.2
1818 Male, age 74, unknown 201.8
Nucleus accumbens
nTPM: 198.0
2391 Female, age 94, left hemisphere 255.2
2698 Female, age 72, unknown 234.9
2732 Male, age 80, right hemisphere 189.0
1806 Female, age 85, left hemisphere 188.0
2824 Male, age 61, right hemisphere 183.8
2286 Male, age 75, left hemisphere 179.0
1783 Male, age 74, unknown 177.3
1856 Female, age 91, right hemisphere 177.0
Nucleus basalis of Meynert
nTPM: 199.9
2569 Male, age 61, both hemispheres 211.3
2821 Male, age 75, both hemispheres 210.3
2393 Male, age 80, right hemisphere 203.0
2484 Female, age 94, left hemisphere 174.8
Nucleus of the diagonal band
nTPM: 180.2
2029 Male, age 61, right hemisphere 194.3
1812 Female, age 91, both hemispheres 186.7
2195 Female, age 85, both hemispheres 176.9
2775 Male, age 80, right hemisphere 173.9
1979 Male, age 74, unknown 169.3
Putamen
nTPM: 190.5
1829 Male, age 74, unknown 208.4
2647 Male, age 75, left hemisphere 197.9
1838 Male, age 80, right hemisphere 197.0
2482 Female, age 94, left hemisphere 192.4
2489 Female, age 72, unknown 182.3
1937 Female, age 91, right hemisphere 181.9
2466 Female, age 79, unknown 173.8
Septal nuclei
nTPM: 176.8
2629 Female, age 94, right hemisphere 199.0
2199 Male, age 80, right hemisphere 190.6
2031 Female, age 72, unknown 176.4
2009 Female, age 91, both hemispheres 175.1
1960 Male, age 74, unknown 173.0
2394 Male, age 61, left hemisphere 169.1
2059 Female, age 85, both hemispheres 154.4
Stria terminalis, bed nucleus
nTPM: 172.7
1974 Female, age 91, both hemispheres 183.1
2486 Female, age 94, both hemispheres 170.5
2201 Male, age 74, unknown 164.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

196.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 194.8
Samples: 246

Max nTPM: 337.9
Min nTPM: 63.1
Std nTPM: 37.4
Median nTPM: 194.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 337.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 297.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 289.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 281.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 271.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 269.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 264.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 263.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 259.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 255.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 254.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 253.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 252.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 250.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 250.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 250.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 248.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 245.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 245.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 244.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 243.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 242.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 241.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 240.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 239.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 239.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 238.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 237.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 236.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 235.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 233.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 232.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 232.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 232.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 230.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 230.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 229.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 228.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 228.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 227.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 227.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 227.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 227.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 227.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 226.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 226.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 225.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 225.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 225.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 224.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 222.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 222.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 222.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 219.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 219.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 219.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 219.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 219.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 218.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 218.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 218.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 218.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 218.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 217.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 217.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 217.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 217.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 216.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 216.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 215.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 215.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 214.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 214.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 214.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 213.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 213.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 213.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 213.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 211.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 211.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 210.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 209.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 209.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 208.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 208.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 208.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 207.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 207.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 207.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 207.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 206.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 206.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 206.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 206.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 206.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 205.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 205.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 205.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 205.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 204.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 204.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 204.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 203.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 203.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 202.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 202.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 202.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 202.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 201.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 199.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 199.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 198.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 198.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 198.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 197.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 197.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 197.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 196.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 196.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 196.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 196.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 195.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 195.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 194.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 194.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 194.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 194.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 194.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 193.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 193.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 193.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 192.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 192.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 192.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 192.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 192.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 192.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 191.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 191.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 191.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 190.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 189.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 189.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 189.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 188.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 188.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 187.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 187.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 187.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 187.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 186.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 186.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 185.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 185.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 184.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 184.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 184.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 184.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 184.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 183.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 183.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 182.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 182.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 181.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 181.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 180.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 180.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 180.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 179.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 179.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 178.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 177.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 177.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 176.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 176.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 176.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 175.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 175.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 174.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 173.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 173.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 173.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 173.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 173.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 172.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 172.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 172.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 171.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 171.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 169.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 169.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 169.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 169.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 166.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 166.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 166.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 165.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 165.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 164.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 164.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 163.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 162.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 161.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 161.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 158.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 158.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 157.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 157.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 156.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 156.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 156.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 154.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 154.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 153.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 153.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 152.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 152.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 152.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 151.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 149.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 149.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 148.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 148.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 145.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 145.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 143.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 139.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 138.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 137.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 137.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 133.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 133.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 131.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 128.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 127.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 127.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 126.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 125.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 124.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 122.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 119.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 118.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 114.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 112.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 82.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 63.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 189.6
Samples: 246

Max nTPM: 358.3
Min nTPM: 56.9
Std nTPM: 40.3
Median nTPM: 193.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 358.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 335.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 290.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 270.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 261.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 258.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 255.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 250.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 250.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 249.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 248.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 247.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 245.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 245.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 244.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 242.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 241.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 239.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 238.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 237.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 236.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 236.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 235.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 233.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 232.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 232.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 231.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 230.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 229.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 229.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 227.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 227.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 226.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 226.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 225.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 224.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 224.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 224.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 223.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 223.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 223.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 223.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 222.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 222.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 222.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 222.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 221.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 221.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 221.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 220.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 219.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 219.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 219.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 219.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 218.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 218.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 217.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 216.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 216.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 216.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 216.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 215.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 215.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 215.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 214.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 214.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 214.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 214.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 214.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 213.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 213.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 212.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 212.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 212.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 211.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 211.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 211.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 211.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 210.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 210.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 207.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 207.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 207.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 207.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 206.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 206.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 206.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 206.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 205.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 205.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 204.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 204.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 203.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 203.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 203.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 203.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 202.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 202.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 202.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 201.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 201.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 200.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 200.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 200.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 200.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 200.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 199.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 199.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 198.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 197.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 197.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 196.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 195.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 195.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 195.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 195.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 195.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 195.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 195.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 193.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 193.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 193.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 193.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 192.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 191.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 191.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 190.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 190.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 189.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 189.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 188.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 187.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 187.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 187.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 187.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 186.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 186.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 186.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 186.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 185.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 185.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 185.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 185.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 185.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 184.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 183.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 183.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 183.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 182.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 182.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 181.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 181.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 181.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 181.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 181.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 181.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 181.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 180.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 179.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 179.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 178.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 178.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 177.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 176.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 176.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 175.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 175.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 175.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 174.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 174.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 174.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 171.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 171.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 170.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 169.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 169.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 168.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 167.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 167.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 166.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 166.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 166.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 165.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 165.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 165.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 165.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 165.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 164.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 164.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 164.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 164.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 163.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 162.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 162.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 162.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 160.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 160.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 159.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 158.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 158.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 158.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 157.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 156.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 156.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 155.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 155.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 154.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 154.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 151.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 150.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 150.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 150.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 149.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 148.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 146.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 144.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 141.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 139.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 138.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 137.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 135.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 134.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 132.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 131.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 130.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 129.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 129.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 129.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 128.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 127.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 127.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 127.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 119.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 118.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 116.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 111.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 110.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 107.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 106.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 106.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 103.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 101.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 97.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 91.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 62.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 56.9
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Brain - Putamen (basal ganglia)
Average nTPM: 196.4
Samples: 205

Max nTPM: 331.1
Min nTPM: 94.8
Std nTPM: 40.8
Median nTPM: 193.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 331.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 321.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 306.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 288.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 286.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 282.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 281.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 276.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 274.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 274.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 268.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 260.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 256.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 256.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 253.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 253.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 252.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 249.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 248.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 247.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 246.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 244.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 243.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 242.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 241.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 241.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 240.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 238.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 237.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 236.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 236.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 236.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 235.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 235.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 235.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 233.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 233.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 233.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 232.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 232.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 231.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 230.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 230.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 230.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 230.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 228.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 227.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 227.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 226.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 224.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 223.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 223.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 223.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 222.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 220.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 220.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 220.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 220.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 219.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 219.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 219.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 219.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 218.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 217.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 217.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 217.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 211.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 210.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 209.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 209.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 209.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 208.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 207.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 207.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 206.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 205.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 205.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 205.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 204.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 204.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 204.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 202.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 202.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 201.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 201.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 200.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 199.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 199.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 199.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 198.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 198.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 197.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 196.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 196.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 196.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 196.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 195.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 195.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 195.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 194.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 194.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 194.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 193.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 193.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 192.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 192.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 191.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 191.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 190.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 190.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 190.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 190.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 190.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 189.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 189.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 189.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 188.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 187.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 187.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 187.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 186.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 186.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 186.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 185.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 185.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 185.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 185.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 185.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 184.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 184.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 183.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 182.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 182.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 181.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 180.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 179.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 179.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 177.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 177.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 177.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 177.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 176.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 176.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 175.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 175.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 174.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 174.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 173.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 172.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 171.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 171.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 169.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 168.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 168.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 168.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 168.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 168.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 168.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 165.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 164.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 163.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 163.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 163.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 162.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 161.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 161.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 160.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 160.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 159.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 157.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 155.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 155.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 154.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 154.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 153.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 152.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 151.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 151.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 149.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 149.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 149.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 148.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 144.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 144.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 142.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 141.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 141.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 140.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 139.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 137.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 137.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 136.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 135.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 133.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 133.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 131.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 131.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 131.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 130.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 125.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 117.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 116.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 113.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 106.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 94.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

540.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 371.0
FF:10164-103B2 76 years, female 371.0
Nucleus accumbens
Scaled Tags Per Million: 341.1
FF:10037-101F1 23-56 years, mixed 341.1
Putamen
Scaled Tags Per Million: 508.1
FF:10176-103C5 60 years, female 508.1
Globus pallidus
Scaled Tags Per Million: 540.7
FF:10161-103A8 76 years, female 544.7
FF:10175-103C4 60 years, female 536.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

131.9
Pig sample Sample description nTPM
Caudate
nTPM: 109.4
Samples: 4

Max nTPM: 125.4
Min nTPM: 95.0
Sample A Female 117.0
Sample B Female 95.0
Sample C Male 125.4
Sample D Male 100.3
Putamen
nTPM: 131.9
Samples: 4

Max nTPM: 149.8
Min nTPM: 109.6
Sample A Female 140.6
Sample B Female 109.6
Sample C Male 149.8
Sample D Male 127.6
Septum
nTPM: 114.3
Samples: 4

Max nTPM: 129.4
Min nTPM: 104.1
Sample A Female 129.4
Sample B Female 109.9
Sample C Male 104.1
Sample D Male 113.8
Ventral pallidum
nTPM: 120.2
Samples: 4

Max nTPM: 125.8
Min nTPM: 116.2
Sample A Female 121.5
Sample B Female 117.2
Sample C Male 116.2
Sample D Male 125.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 82.0
Samples: 4

Max nTPM: 90.5
Min nTPM: 73.0
Sample A Male 90.5
Sample B Male 81.3
Sample C Female 83.2
Sample D Female 73.0
Septum
nTPM: 67.4
Samples: 4

Max nTPM: 74.1
Min nTPM: 59.4
Sample A Male 71.6
Sample B Male 74.1
Sample C Female 64.3
Sample D Female 59.4
Ventral forebrain
nTPM: 79.3
Samples: 4

Max nTPM: 92.4
Min nTPM: 67.8
Sample A Male 92.4
Sample B Male 75.8
Sample C Female 67.8
Sample D Female 81.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.6
68445161 Antisense, RP_050111_02_H06, Mouse strain C57BL/6J (56 days, male) 10.6
572 Antisense, RP_Baylor_103185, Mouse strain C57BL/6J (56 days, male) 0.5
571 Antisense, RP_Baylor_103185, Mouse strain C57BL/6J (56 days, male) 0.4
Pallidum
Expression energy: 4.7
68445161 Antisense, RP_050111_02_H06, Mouse strain C57BL/6J (56 days, male) 9.0
571 Antisense, RP_Baylor_103185, Mouse strain C57BL/6J (56 days, male) 0.4
572 Antisense, RP_Baylor_103185, Mouse strain C57BL/6J (56 days, male) 0.4

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