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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:335.4 nTPM
HPA Brain:129.9 nTPM
GTEx:335.4 nTPM
FANTOM5:541.8 Scaled Tags Per Million
Pig:69.9 nTPM
Mouse:1245.7 nTPM
Allen mouse:5.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051428
Glial cells High
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

129.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 95.7
2481 Female, age 94, left hemisphere 130.6
1781 Male, age 74, unknown 98.1
2288 Male, age 75, left hemisphere 97.5
1854 Male, age 80, left hemisphere 93.4
2289 Male, age 61, right hemisphere 93.0
2846 Female, age 79, unknown 88.8
1857 Female, age 85, left hemisphere 82.1
2290 Female, age 72, unknown 81.8
Globus pallidus, externus
nTPM: 113.9
1996 Male, age 80, right hemisphere 167.9
2772 Female, age 79, unknown 122.3
2395 Male, age 75, both hemispheres 113.8
2646 Male, age 61, right hemisphere 99.1
2567 Female, age 72, unknown 66.3
Globus pallidus, internus
nTPM: 124.7
2037 Male, age 80, right hemisphere 145.0
2111 Female, age 85, right hemisphere 138.7
2778 Female, age 91, both hemispheres 133.7
1818 Male, age 74, unknown 124.6
2483 Female, age 94, right hemisphere 116.3
2287 Male, age 75, right hemisphere 110.6
2566 Female, age 72, unknown 103.8
Nucleus accumbens
nTPM: 92.1
2391 Female, age 94, left hemisphere 124.9
2698 Female, age 72, unknown 123.4
2732 Male, age 80, right hemisphere 107.8
2286 Male, age 75, left hemisphere 96.0
1806 Female, age 85, left hemisphere 85.8
1856 Female, age 91, right hemisphere 76.7
1783 Male, age 74, unknown 62.8
2824 Male, age 61, right hemisphere 59.7
Nucleus basalis of Meynert
nTPM: 115.0
2393 Male, age 80, right hemisphere 141.3
2569 Male, age 61, both hemispheres 110.5
2821 Male, age 75, both hemispheres 108.4
2484 Female, age 94, left hemisphere 99.7
Nucleus of the diagonal band
nTPM: 107.3
2775 Male, age 80, right hemisphere 125.1
1812 Female, age 91, both hemispheres 120.0
2195 Female, age 85, both hemispheres 110.0
2029 Male, age 61, right hemisphere 106.7
1979 Male, age 74, unknown 74.5
Putamen
nTPM: 90.3
2482 Female, age 94, left hemisphere 129.2
1829 Male, age 74, unknown 103.6
2489 Female, age 72, unknown 97.9
2647 Male, age 75, left hemisphere 82.8
1937 Female, age 91, right hemisphere 81.3
2466 Female, age 79, unknown 69.3
1838 Male, age 80, right hemisphere 67.8
Septal nuclei
nTPM: 129.9
2199 Male, age 80, right hemisphere 163.8
2629 Female, age 94, right hemisphere 163.2
2059 Female, age 85, both hemispheres 133.7
2394 Male, age 61, left hemisphere 119.4
2009 Female, age 91, both hemispheres 113.3
1960 Male, age 74, unknown 110.8
2031 Female, age 72, unknown 105.3
Stria terminalis, bed nucleus
nTPM: 95.4
1974 Female, age 91, both hemispheres 110.3
2201 Male, age 74, unknown 91.3
2486 Female, age 94, both hemispheres 84.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

335.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 265.2
Samples: 246

Max nTPM: 686.8
Min nTPM: 105.6
Std nTPM: 102.7
Median nTPM: 246.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 686.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 665.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 649.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 642.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 600.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 580.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 487.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 486.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 480.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 473.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 468.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 458.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 454.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 449.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 448.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 436.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 427.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 427.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 421.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 413.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 405.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 403.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 394.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 389.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 388.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 387.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 385.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 384.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 380.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 373.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 373.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 373.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 371.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 370.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 367.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 366.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 361.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 360.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 357.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 356.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 356.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 355.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 353.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 351.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 349.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 347.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 341.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 332.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 331.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 330.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 330.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 327.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 326.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 325.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 322.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 321.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 318.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 314.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 314.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 313.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 313.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 312.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 312.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 309.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 309.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 307.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 305.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 303.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 303.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 301.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 301.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 301.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 298.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 296.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 294.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 293.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 292.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 292.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 292.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 291.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 291.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 290.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 289.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 288.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 288.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 288.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 286.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 286.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 284.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 282.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 280.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 278.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 276.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 275.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 275.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 275.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 275.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 274.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 273.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 271.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 271.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 270.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 268.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 267.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 267.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 267.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 267.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 265.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 262.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 262.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 260.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 260.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 259.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 258.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 254.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 253.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 252.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 249.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 249.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 249.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 247.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 247.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 247.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 246.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 246.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 245.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 242.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 241.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 241.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 241.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 240.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 239.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 238.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 238.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 238.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 237.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 236.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 235.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 234.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 233.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 231.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 230.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 230.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 229.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 228.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 227.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 226.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 224.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 222.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 221.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 221.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 221.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 219.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 219.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 218.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 216.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 214.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 214.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 213.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 213.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 212.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 211.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 211.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 210.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 208.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 208.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 207.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 207.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 205.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 203.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 202.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 200.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 200.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 199.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 199.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 199.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 198.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 198.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 197.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 197.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 195.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 194.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 194.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 191.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 191.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 190.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 187.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 186.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 185.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 185.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 184.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 184.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 181.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 181.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 180.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 180.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 178.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 177.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 176.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 176.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 175.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 174.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 173.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 172.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 172.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 172.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 171.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 169.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 168.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 167.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 166.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 166.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 165.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 162.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 162.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 161.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 159.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 158.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 158.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 156.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 156.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 154.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 153.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 153.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 152.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 151.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 149.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 146.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 144.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 144.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 144.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 141.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 139.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 138.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 138.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 137.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 135.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 133.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 130.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 130.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 130.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 129.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 128.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 121.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 116.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 105.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 254.5
Samples: 246

Max nTPM: 1100.4
Min nTPM: 92.7
Std nTPM: 126.9
Median nTPM: 220.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1100.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 785.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 737.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 729.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 662.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 613.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 574.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 522.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 484.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 480.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 479.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 477.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 464.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 460.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 455.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 449.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 444.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 443.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 436.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 433.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 426.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 419.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 415.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 415.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 410.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 404.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 398.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 385.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 382.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 377.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 376.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 368.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 367.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 366.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 366.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 363.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 354.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 351.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 349.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 348.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 344.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 344.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 342.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 340.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 339.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 338.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 336.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 335.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 333.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 331.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 330.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 325.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 324.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 322.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 319.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 314.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 313.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 311.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 309.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 308.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 304.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 303.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 302.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 300.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 300.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 298.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 298.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 297.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 296.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 295.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 292.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 291.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 291.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 291.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 285.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 284.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 284.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 281.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 280.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 277.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 276.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 274.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 271.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 269.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 265.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 263.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 261.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 259.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 258.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 258.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 258.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 256.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 256.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 256.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 255.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 255.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 254.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 254.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 249.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 246.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 245.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 243.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 241.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 240.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 240.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 240.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 239.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 239.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 238.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 237.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 236.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 235.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 231.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 230.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 229.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 228.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 228.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 228.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 227.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 227.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 225.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 224.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 220.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 220.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 220.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 218.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 218.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 218.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 217.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 216.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 215.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 215.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 212.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 211.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 211.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 211.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 211.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 210.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 210.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 209.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 209.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 205.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 204.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 203.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 202.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 201.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 200.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 200.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 197.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 196.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 195.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 195.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 194.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 194.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 193.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 193.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 191.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 189.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 189.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 188.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 187.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 187.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 187.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 185.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 184.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 184.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 183.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 182.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 182.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 181.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 180.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 179.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 178.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 177.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 177.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 177.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 176.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 174.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 174.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 174.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 174.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 174.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 173.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 173.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 170.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 170.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 170.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 169.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 169.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 168.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 165.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 164.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 163.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 163.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 162.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 161.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 161.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 161.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 160.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 160.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 159.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 158.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 158.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 158.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 157.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 156.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 155.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 155.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 154.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 153.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 153.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 152.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 151.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 151.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 144.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 144.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 143.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 143.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 142.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 137.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 136.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 135.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 135.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 134.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 132.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 132.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 127.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 127.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 125.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 125.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 124.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 124.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 121.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 119.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 119.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 118.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 118.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 116.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 116.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 116.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 115.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 110.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 104.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 100.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 95.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 92.7
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 335.4
Samples: 205

Max nTPM: 856.7
Min nTPM: 98.1
Std nTPM: 128.0
Median nTPM: 313.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 856.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 802.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 697.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 684.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 666.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 635.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 626.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 625.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 600.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 592.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 589.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 586.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 585.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 582.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 571.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 563.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 533.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 520.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 519.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 511.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 509.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 486.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 481.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 473.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 463.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 462.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 460.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 457.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 456.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 453.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 452.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 451.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 451.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 449.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 447.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 447.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 445.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 444.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 439.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 436.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 434.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 433.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 431.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 431.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 426.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 426.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 425.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 424.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 419.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 406.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 405.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 405.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 404.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 402.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 401.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 399.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 398.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 395.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 395.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 395.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 394.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 387.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 379.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 375.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 373.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 371.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 369.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 369.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 361.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 357.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 350.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 349.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 349.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 345.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 344.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 344.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 343.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 343.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 339.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 337.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 337.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 335.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 334.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 333.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 332.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 330.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 326.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 326.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 325.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 325.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 324.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 323.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 323.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 322.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 322.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 321.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 321.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 319.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 317.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 316.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 315.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 315.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 313.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 311.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 308.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 308.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 307.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 304.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 299.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 298.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 295.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 293.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 292.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 292.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 291.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 290.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 289.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 288.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 286.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 285.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 282.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 282.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 281.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 281.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 280.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 280.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 280.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 274.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 274.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 273.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 270.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 270.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 267.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 266.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 265.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 265.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 265.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 264.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 262.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 260.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 258.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 258.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 257.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 255.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 255.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 254.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 251.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 250.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 250.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 250.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 249.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 249.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 248.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 247.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 244.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 241.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 241.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 241.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 240.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 238.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 235.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 233.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 232.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 231.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 227.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 222.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 222.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 218.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 217.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 217.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 216.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 216.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 215.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 214.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 214.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 210.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 206.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 206.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 202.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 202.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 201.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 199.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 199.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 199.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 198.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 197.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 197.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 197.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 194.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 191.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 189.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 189.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 188.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 186.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 184.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 182.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 180.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 177.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 172.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 172.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 171.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 147.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 138.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 119.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 98.1
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

541.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 239.1
FF:10164-103B2 76 years, female 239.1
Nucleus accumbens
Scaled Tags Per Million: 215.7
FF:10037-101F1 23-56 years, mixed 215.7
Putamen
Scaled Tags Per Million: 192.8
FF:10176-103C5 60 years, female 192.8
Globus pallidus
Scaled Tags Per Million: 541.8
FF:10175-103C4 60 years, female 608.1
FF:10161-103A8 76 years, female 475.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.9
Pig sample Sample description nTPM
Caudate
nTPM: 48.1
Samples: 4

Max nTPM: 53.1
Min nTPM: 44.6
Sample A Female 47.6
Sample B Female 47.1
Sample C Male 53.1
Sample D Male 44.6
Putamen
nTPM: 69.9
Samples: 4

Max nTPM: 97.1
Min nTPM: 47.7
Sample A Female 97.1
Sample B Female 47.7
Sample C Male 73.4
Sample D Male 61.5
Septum
nTPM: 59.7
Samples: 4

Max nTPM: 74.5
Min nTPM: 48.0
Sample A Female 56.1
Sample B Female 48.0
Sample C Male 74.5
Sample D Male 60.2
Ventral pallidum
nTPM: 57.4
Samples: 4

Max nTPM: 73.0
Min nTPM: 41.0
Sample A Female 41.0
Sample B Female 59.8
Sample C Male 73.0
Sample D Male 55.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1245.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 756.1
Samples: 4

Max nTPM: 804.7
Min nTPM: 714.9
Sample A Male 738.6
Sample B Male 714.9
Sample C Female 766.1
Sample D Female 804.7
Septum
nTPM: 1245.7
Samples: 4

Max nTPM: 1421.8
Min nTPM: 938.2
Sample A Male 938.2
Sample B Male 1402.9
Sample C Female 1421.8
Sample D Female 1219.8
Ventral forebrain
nTPM: 652.1
Samples: 4

Max nTPM: 757.5
Min nTPM: 594.7
Sample A Male 600.8
Sample B Male 655.5
Sample C Female 757.5
Sample D Female 594.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.5
71836880 Antisense, RP_051017_02_E10, Mouse strain C57BL/6J (56 days, male) 6.5
68632649 Antisense, RP_050125_02_A01, Mouse strain C57BL/6J (56 days, male) 4.4
Pallidum
Expression energy: 4.6
71836880 Antisense, RP_051017_02_E10, Mouse strain C57BL/6J (56 days, male) 6.4
68632649 Antisense, RP_050125_02_A01, Mouse strain C57BL/6J (56 days, male) 2.9

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