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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:269.2 nTPM
HPA Brain:73.9 nTPM
GTEx:269.2 nTPM
FANTOM5:574.6 Scaled Tags Per Million
Pig:126.2 nTPM
Mouse:425.6 nTPM
Allen mouse:15.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA043060
Glial cells High
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 68.2
2846 Female, age 79, unknown 88.9
1854 Male, age 80, left hemisphere 78.5
2290 Female, age 72, unknown 73.5
2481 Female, age 94, left hemisphere 72.8
1857 Female, age 85, left hemisphere 65.1
2288 Male, age 75, left hemisphere 62.5
1781 Male, age 74, unknown 58.9
2289 Male, age 61, right hemisphere 45.3
Globus pallidus, externus
nTPM: 73.6
2772 Female, age 79, unknown 104.4
1996 Male, age 80, right hemisphere 93.1
2395 Male, age 75, both hemispheres 68.7
2567 Female, age 72, unknown 52.8
2646 Male, age 61, right hemisphere 48.8
Globus pallidus, internus
nTPM: 73.9
2287 Male, age 75, right hemisphere 106.2
2483 Female, age 94, right hemisphere 84.1
1818 Male, age 74, unknown 81.4
2037 Male, age 80, right hemisphere 76.7
2778 Female, age 91, both hemispheres 72.9
2566 Female, age 72, unknown 53.6
2111 Female, age 85, right hemisphere 42.4
Nucleus accumbens
nTPM: 67.2
1856 Female, age 91, right hemisphere 90.1
2698 Female, age 72, unknown 84.5
2391 Female, age 94, left hemisphere 81.9
2286 Male, age 75, left hemisphere 60.9
1806 Female, age 85, left hemisphere 60.7
1783 Male, age 74, unknown 58.1
2824 Male, age 61, right hemisphere 58.1
2732 Male, age 80, right hemisphere 43.2
Nucleus basalis of Meynert
nTPM: 59.9
2821 Male, age 75, both hemispheres 63.2
2393 Male, age 80, right hemisphere 61.3
2484 Female, age 94, left hemisphere 59.9
2569 Male, age 61, both hemispheres 55.1
Nucleus of the diagonal band
nTPM: 59.8
1812 Female, age 91, both hemispheres 81.0
1979 Male, age 74, unknown 59.1
2775 Male, age 80, right hemisphere 56.7
2195 Female, age 85, both hemispheres 51.9
2029 Male, age 61, right hemisphere 50.2
Putamen
nTPM: 62.4
1829 Male, age 74, unknown 76.5
1838 Male, age 80, right hemisphere 73.9
2466 Female, age 79, unknown 73.7
1937 Female, age 91, right hemisphere 65.2
2482 Female, age 94, left hemisphere 58.7
2647 Male, age 75, left hemisphere 51.0
2489 Female, age 72, unknown 37.6
Septal nuclei
nTPM: 58.6
2031 Female, age 72, unknown 72.1
2629 Female, age 94, right hemisphere 69.5
2009 Female, age 91, both hemispheres 61.2
1960 Male, age 74, unknown 57.1
2394 Male, age 61, left hemisphere 54.9
2199 Male, age 80, right hemisphere 52.4
2059 Female, age 85, both hemispheres 43.0
Stria terminalis, bed nucleus
nTPM: 45.5
1974 Female, age 91, both hemispheres 56.3
2201 Male, age 74, unknown 48.6
2486 Female, age 94, both hemispheres 31.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

269.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 240.7
Samples: 246

Max nTPM: 656.6
Min nTPM: 118.2
Std nTPM: 72.1
Median nTPM: 226.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 656.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 631.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 528.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 511.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 457.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 423.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 422.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 422.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 417.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 358.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 349.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 349.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 349.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 348.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 346.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 346.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 345.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 333.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 332.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 332.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 329.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 329.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 329.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 328.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 328.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 324.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 323.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 322.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 319.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 318.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 317.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 316.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 313.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 310.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 308.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 307.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 303.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 300.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 294.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 290.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 289.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 288.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 288.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 286.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 285.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 285.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 284.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 282.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 280.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 280.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 277.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 275.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 272.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 272.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 271.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 269.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 268.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 267.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 265.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 264.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 264.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 263.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 261.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 260.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 259.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 258.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 257.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 257.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 256.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 256.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 256.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 256.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 255.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 255.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 254.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 254.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 254.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 254.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 253.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 253.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 253.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 249.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 249.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 249.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 249.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 248.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 245.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 245.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 243.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 242.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 242.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 242.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 241.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 239.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 239.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 239.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 238.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 237.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 236.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 236.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 235.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 234.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 233.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 233.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 233.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 233.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 233.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 232.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 232.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 232.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 232.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 231.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 231.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 229.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 228.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 228.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 228.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 227.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 227.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 227.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 227.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 226.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 226.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 226.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 225.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 225.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 224.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 224.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 223.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 223.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 223.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 222.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 222.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 222.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 222.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 221.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 221.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 221.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 220.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 220.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 219.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 219.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 219.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 218.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 217.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 217.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 216.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 214.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 214.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 213.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 213.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 211.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 210.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 209.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 209.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 209.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 208.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 208.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 207.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 207.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 207.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 206.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 206.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 205.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 205.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 204.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 204.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 204.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 204.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 203.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 203.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 203.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 202.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 202.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 201.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 201.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 201.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 201.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 200.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 200.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 199.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 199.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 199.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 197.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 197.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 196.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 196.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 195.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 195.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 194.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 192.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 192.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 191.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 190.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 190.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 190.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 189.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 188.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 188.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 188.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 187.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 186.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 186.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 186.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 186.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 185.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 184.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 184.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 184.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 184.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 183.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 182.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 182.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 181.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 180.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 179.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 178.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 177.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 176.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 176.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 176.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 176.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 174.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 173.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 168.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 168.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 167.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 165.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 164.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 164.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 164.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 160.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 159.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 159.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 158.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 157.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 156.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 156.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 153.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 152.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 145.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 143.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 143.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 136.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 127.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 118.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 269.2
Samples: 246

Max nTPM: 816.8
Min nTPM: 125.0
Std nTPM: 80.8
Median nTPM: 256.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 816.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 573.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 529.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 492.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 481.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 455.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 452.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 444.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 435.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 420.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 419.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 412.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 411.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 409.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 408.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 398.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 387.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 382.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 382.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 382.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 380.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 373.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 366.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 365.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 358.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 355.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 353.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 352.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 351.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 350.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 350.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 349.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 349.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 343.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 343.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 343.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 342.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 340.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 340.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 339.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 337.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 336.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 336.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 335.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 335.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 335.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 330.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 328.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 324.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 324.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 323.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 317.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 317.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 314.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 314.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 312.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 311.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 310.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 310.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 307.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 302.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 302.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 301.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 300.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 300.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 300.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 297.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 296.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 295.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 294.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 293.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 293.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 291.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 291.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 289.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 289.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 289.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 289.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 289.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 288.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 284.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 282.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 282.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 282.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 281.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 281.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 280.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 280.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 279.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 279.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 279.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 278.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 276.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 276.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 276.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 275.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 274.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 273.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 272.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 272.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 271.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 269.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 269.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 269.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 269.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 268.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 268.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 268.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 265.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 265.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 265.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 263.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 263.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 263.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 263.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 261.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 261.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 261.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 260.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 259.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 259.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 259.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 256.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 256.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 256.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 256.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 255.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 252.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 251.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 251.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 250.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 250.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 250.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 249.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 248.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 248.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 248.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 245.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 244.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 244.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 243.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 241.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 241.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 240.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 240.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 239.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 238.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 237.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 237.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 237.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 236.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 234.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 233.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 233.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 232.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 232.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 231.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 229.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 228.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 228.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 228.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 227.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 227.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 226.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 226.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 226.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 226.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 226.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 225.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 225.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 225.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 224.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 224.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 224.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 224.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 223.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 223.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 222.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 221.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 221.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 221.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 220.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 219.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 219.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 217.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 217.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 216.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 215.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 215.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 214.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 212.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 212.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 212.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 211.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 209.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 209.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 208.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 208.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 207.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 207.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 206.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 206.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 203.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 203.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 202.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 202.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 201.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 201.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 200.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 200.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 199.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 199.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 198.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 197.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 196.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 196.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 194.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 194.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 193.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 191.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 188.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 187.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 185.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 185.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 185.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 181.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 179.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 178.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 177.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 177.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 176.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 175.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 174.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 174.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 166.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 164.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 158.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 157.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 149.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 148.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 147.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 147.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 142.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 142.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 130.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 125.0
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Brain - Putamen (basal ganglia)
Average nTPM: 259.0
Samples: 205

Max nTPM: 549.4
Min nTPM: 143.1
Std nTPM: 64.8
Median nTPM: 247.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 549.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 488.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 486.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 431.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 416.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 402.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 397.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 394.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 386.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 380.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 379.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 378.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 374.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 373.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 373.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 368.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 367.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 355.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 344.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 341.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 340.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 337.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 337.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 335.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 325.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 322.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 319.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 318.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 317.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 316.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 314.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 313.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 311.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 311.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 310.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 310.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 309.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 309.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 308.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 306.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 304.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 303.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 300.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 300.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 299.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 299.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 298.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 298.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 298.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 297.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 292.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 291.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 291.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 289.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 286.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 284.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 284.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 283.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 282.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 281.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 281.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 280.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 280.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 279.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 277.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 276.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 276.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 275.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 272.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 271.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 271.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 270.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 270.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 270.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 270.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 269.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 269.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 269.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 268.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 268.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 268.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 267.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 267.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 267.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 265.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 265.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 264.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 264.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 263.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 259.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 258.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 257.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 256.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 254.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 254.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 253.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 252.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 252.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 250.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 250.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 249.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 248.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 247.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 246.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 246.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 246.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 246.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 246.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 245.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 245.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 244.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 244.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 243.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 241.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 240.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 240.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 239.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 238.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 237.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 236.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 234.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 234.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 233.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 232.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 232.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 232.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 231.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 231.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 231.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 230.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 229.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 229.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 229.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 229.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 229.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 228.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 227.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 227.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 227.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 226.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 225.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 224.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 224.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 222.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 222.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 220.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 220.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 220.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 219.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 218.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 218.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 217.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 216.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 215.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 214.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 212.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 212.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 211.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 210.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 210.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 209.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 209.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 206.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 206.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 204.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 204.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 203.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 203.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 202.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 202.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 201.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 199.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 199.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 199.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 197.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 196.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 196.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 195.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 193.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 193.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 192.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 192.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 190.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 183.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 182.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 182.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 182.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 181.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 180.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 179.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 176.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 175.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 172.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 172.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 171.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 170.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 169.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 167.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 167.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 165.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 162.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 159.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 158.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 151.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 143.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

574.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 354.0
FF:10164-103B2 76 years, female 354.0
Nucleus accumbens
Scaled Tags Per Million: 330.4
FF:10037-101F1 23-56 years, mixed 330.4
Putamen
Scaled Tags Per Million: 574.6
FF:10176-103C5 60 years, female 574.6
Globus pallidus
Scaled Tags Per Million: 370.2
FF:10175-103C4 60 years, female 388.4
FF:10161-103A8 76 years, female 352.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.2
Pig sample Sample description nTPM
Caudate
nTPM: 94.4
Samples: 4

Max nTPM: 107.6
Min nTPM: 81.0
Sample A Female 101.2
Sample B Female 81.0
Sample C Male 107.6
Sample D Male 87.7
Putamen
nTPM: 126.2
Samples: 4

Max nTPM: 184.7
Min nTPM: 99.8
Sample A Female 99.8
Sample B Female 111.6
Sample C Male 184.7
Sample D Male 108.7
Septum
nTPM: 99.1
Samples: 4

Max nTPM: 108.0
Min nTPM: 90.1
Sample A Female 96.1
Sample B Female 90.1
Sample C Male 108.0
Sample D Male 102.0
Ventral pallidum
nTPM: 96.3
Samples: 4

Max nTPM: 109.5
Min nTPM: 77.8
Sample A Female 109.5
Sample B Female 104.1
Sample C Male 93.8
Sample D Male 77.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

425.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 402.8
Samples: 4

Max nTPM: 423.2
Min nTPM: 374.3
Sample A Male 392.6
Sample B Male 374.3
Sample C Female 423.2
Sample D Female 421.2
Septum
nTPM: 425.6
Samples: 4

Max nTPM: 468.4
Min nTPM: 382.6
Sample A Male 382.6
Sample B Male 468.4
Sample C Female 461.9
Sample D Female 389.6
Ventral forebrain
nTPM: 409.1
Samples: 4

Max nTPM: 450.7
Min nTPM: 370.4
Sample A Male 370.4
Sample B Male 417.5
Sample C Female 450.7
Sample D Female 397.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 14.7
293241 Antisense, RP_040609_01_G11, Mouse strain C57BL/6J (56 days, male) 14.7
323595 Antisense, RP_040609_01_G11, Mouse strain C57BL/6J (56 days, male) 7.3
Pallidum
Expression energy: 15.4
293241 Antisense, RP_040609_01_G11, Mouse strain C57BL/6J (56 days, male) 15.4
323595 Antisense, RP_040609_01_G11, Mouse strain C57BL/6J (56 days, male) 8.1

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