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EEF1A1
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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:2550.9 nTPM
FANTOM5:29.5 Scaled Tags Per Million

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2550.9
Sample id Sample description nTPM
Area postrema
nTPM: 2320.5
2799 Male, age 61, both hemispheres 3023.6
2306 Male, age 80, both hemispheres 2399.8
2054 Male, age 76, both hemispheres 1538.0
Dorsal medullary reticular nucleus
nTPM: 1722.9
2373 Male, age 61, both hemispheres 1954.5
2040 Female, age 85, both hemispheres 1621.7
2088 Male, age 76, both hemispheres 1592.6
Dorsal motor vagal complex
nTPM: 1885.6
2797 Male, age 61, both hemispheres 2705.4
2807 Female, age 85, both hemispheres 2092.5
2643 Male, age 74, both hemispheres 2082.9
2185 Male, age 76, both hemispheres 1751.6
2844 Male, age 55, unknown 1722.3
2133 Female, age 91, both hemispheres 1696.5
2000 Male, age 74, unknown 1635.5
2813 Female, age 72, unknown 1397.9
Gigantocellular reticular nuclei, medullary
nTPM: 1873.6
2314 Male, age 61, both hemispheres 2476.8
2387 Female, age 91, both hemispheres 2223.7
2462 Male, age 74, both hemispheres 1749.9
2310 Male, age 80, both hemispheres 1685.4
2022 Male, age 76, right hemisphere 1568.8
1876 Female, age 85, both hemispheres 1537.0
Gigantocellular reticular nuclei, pars
nTPM: 1506.6
2084 Female, age 85, both hemispheres 1660.6
2336 Male, age 61, both hemispheres 1593.5
2706 Male, age 80, both hemispheres 1530.5
2330 Male, age 80, both hemispheres 1457.3
2168 Male, age 76, both hemispheres 1290.8
Inferior olive
nTPM: 2265.5
2379 Male, age 80, both hemispheres 2493.5
2178 Male, age 61, both hemispheres 2475.7
2085 Female, age 85, both hemispheres 2361.0
2563 Male, age 74, both hemispheres 2178.9
2628 Female, age 91, both hemispheres 1818.6
Lateral medullary reticular nucleus
nTPM: 2054.5
2190 Female, age 85, both hemispheres 2303.7
2852 Male, age 80, both hemispheres 2229.5
2305 Male, age 74, both hemispheres 2202.2
2804 Female, age 91, both hemispheres 2077.7
2374 Male, age 61, both hemispheres 1935.7
2044 Male, age 76, both hemispheres 1578.1
Medial olivary nucleus
nTPM: 2542.2
1962 Male, age 76, both hemispheres 2914.4
1943 Male, age 61, both hemispheres 2841.6
2138 Female, age 91, both hemispheres 2497.0
2851 Male, age 80, both hemispheres 1915.9
Medial vestibular nucleus
nTPM: 1662.5
2801 Male, age 74, both hemispheres 1818.8
2743 Female, age 85, both hemispheres 1767.8
2093 Male, age 80, both hemispheres 1763.4
2803 Female, age 91, both hemispheres 1706.3
2624 Male, age 61, both hemispheres 1558.6
2134 Male, age 76, both hemispheres 1360.0
Motor hypoglossal nucleus
nTPM: 1687.5
2132 Female, age 85, both hemispheres 2013.0
2125 Female, age 91, both hemispheres 1967.1
2182 Male, age 80, both hemispheres 1874.0
2277 Male, age 76, both hemispheres 1527.9
2461 Male, age 61, both hemispheres 1055.2
Nucleus ambiguus
nTPM: 2148.4
2071 Male, age 76, both hemispheres 2700.5
2096 Female, age 85, both hemispheres 1596.2
Nucleus cuneatus
nTPM: 1969.7
2380 Male, age 80, both hemispheres 2473.1
2808 Female, age 85, both hemispheres 2350.8
2376 Male, age 61, both hemispheres 2136.5
2805 Female, age 91, both hemispheres 2012.9
2564 Male, age 74, both hemispheres 2012.7
2562 Male, age 61, both hemispheres 1868.6
2381 Male, age 80, both hemispheres 1867.9
2100 Male, age 76, both hemispheres 1584.3
2131 Male, age 76, both hemispheres 1420.3
Nucleus gracilis
nTPM: 2248.3
2299 Female, age 85, both hemispheres 2617.4
2382 Male, age 80, both hemispheres 2275.6
2627 Male, age 74, both hemispheres 1852.0
Nucleus raphe obscurus
nTPM: 2396.8
2142 Male, age 76, midline 2840.6
2845 Female, age 85, midline 2224.3
2800 Male, age 61, midline 2125.4
Nucleus raphe pallidus
nTPM: 2550.9
1924 Male, age 61, midline 3017.4
2145 Male, age 76, midline 2795.5
2183 Male, age 80, midline 1839.8
Nucleus tractus solitarii
nTPM: 1712.0
2144 Female, age 91, right hemisphere 1944.1
2191 Female, age 85, both hemispheres 1942.1
2307 Male, age 80, both hemispheres 1520.8
2656 Male, age 76, both hemispheres 1441.0
Parvicellular reticular nuclei
nTPM: 1683.3
2119 Male, age 80, both hemispheres 1832.6
2095 Male, age 76, both hemispheres 1773.8
2558 Male, age 74, both hemispheres 1443.5
Parvicellular reticular nuclei, medullary
nTPM: 1646.3
2181 Male, age 80, left hemisphere 1659.3
2091 Female, age 85, both hemispheres 1655.0
2189 Female, age 91, both hemispheres 1624.8
Peritrigeminal nucleus
nTPM: 2181.9
2067 Female, age 85, both hemispheres 2527.0
2136 Male, age 76, both hemispheres 2153.2
2179 Male, age 61, both hemispheres 1865.6
Prepositus hypoglossal nucleus
nTPM: 2043.0
2086 Male, age 80, both hemispheres 2046.6
2855 Female, age 85, right hemisphere 2039.4
Spinal trigeminal nucleus, caudal
nTPM: 1710.5
2312 Male, age 61, both hemispheres 1935.6
2308 Male, age 80, both hemispheres 1871.8
2642 Male, age 74, both hemispheres 1788.8
2447 Male, age 76, both hemispheres 1575.8
2390 Female, age 91, both hemispheres 1380.7
Spinal trigeminal nucleus, interpolar
nTPM: 1586.6
2033 Male, age 80, both hemispheres 1785.1
2386 Female, age 85, both hemispheres 1711.3
2389 Female, age 91, both hemispheres 1690.3
2066 Male, age 76, right hemisphere 1570.2
2625 Male, age 61, both hemispheres 1176.2
Spinal vestibular nucleus
nTPM: 1962.7
2384 Male, age 74, both hemispheres 2839.1
2780 Male, age 80, both hemispheres 1945.5
2806 Female, age 85, both hemispheres 1888.7
2748 Male, age 76, both hemispheres 1763.8
2186 Female, age 91, both hemispheres 1711.7
2796 Male, age 61, both hemispheres 1627.7
Superior vestibular nucleus
nTPM: 2062.8
2383 Male, age 74, both hemispheres 2156.6
2015 Male, age 80, both hemispheres 2135.3
2061 Male, age 76, both hemispheres 1896.5
Ventral medullary reticular nucleus
nTPM: 1995.9
2372 Male, age 61, both hemispheres 2322.9
2060 Male, age 76, both hemispheres 1668.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 2126.1
2118 Male, age 80, both hemispheres 2527.4
2302 Female, age 91, both hemispheres 2171.9
2180 Male, age 61, both hemispheres 2010.2
2741 Female, age 85, both hemispheres 1994.1
1986 Male, age 76, both hemispheres 1926.8

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

29.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 29.5
FF:10174-103C3 60 years, female 35.2
FF:10155-103A2 76 years, female 28.5
FF:10038-101F2 18-64 years, mixed 24.9

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