We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
EEF1A1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • EEF1A1
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:4154.8 nTPM
HPA Brain:2942.3 nTPM
GTEx:4154.8 nTPM
FANTOM5:37.4 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2942.3
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 2060.2
1981 Female, age 72, midline 2632.3
2565 Male, age 75, midline 2448.3
2048 Male, age 55, midline 1993.6
2816 Male, age 47, midline 1692.0
2194 Female, age 79, both hemispheres 1534.7
Cervical spinal cord, dorsal horn
nTPM: 2125.9
2173 Female, age 72, unknown 2938.5
2069 Male, age 47, both hemispheres 2653.4
2296 Male, age 66, both hemispheres 2549.6
1877 Male, age 55, unknown 1947.4
2297 Male, age 75, both hemispheres 1373.7
2721 Male, age 90, both hemispheres 1292.5
Cervical spinal cord, ventral horn
nTPM: 2942.3
2480 Male, age 75, both hemispheres 4228.3
2098 Female, age 72, unknown 3591.6
2809 Male, age 90, both hemispheres 3559.7
2295 Male, age 66, both hemispheres 2779.0
2068 Male, age 55, unknown 2221.7
2820 Female, age 79, both hemispheres 1273.7

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4154.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 4154.8
Samples: 159

Max nTPM: 7956.2
Min nTPM: 1777.2
Std nTPM: 1005.2
Median nTPM: 4109.0
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 7956.2
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 6822.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 6759.8
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 6289.2
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 6207.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 6005.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 5975.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 5914.1
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 5830.0
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 5728.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 5697.5
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 5654.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 5615.6
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 5561.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 5538.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 5527.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 5510.5
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 5444.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 5402.2
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 5401.7
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 5377.6
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 5373.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 5324.8
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 5315.1
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 5172.3
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 5153.5
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 5119.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 5093.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 5080.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 5050.7
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 4999.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 4972.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 4961.0
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 4908.9
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 4886.2
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 4857.3
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 4839.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 4835.3
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 4810.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 4788.4
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 4780.5
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 4752.9
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 4643.4
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 4630.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 4614.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 4592.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 4572.5
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 4555.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 4522.7
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 4519.4
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 4519.3
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 4514.1
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 4496.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 4496.1
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 4460.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 4444.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 4434.6
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 4412.9
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 4401.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 4389.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 4371.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 4367.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 4355.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 4329.9
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 4324.9
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 4319.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 4313.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 4285.5
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 4272.6
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 4268.4
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 4243.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 4232.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 4206.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 4204.9
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 4177.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 4144.0
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 4135.6
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 4126.2
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 4117.1
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 4109.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 4106.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 4052.6
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 4026.3
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 4020.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 4019.8
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 3953.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 3947.3
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 3938.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 3934.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 3914.4
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 3890.1
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 3880.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 3873.5
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 3863.7
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 3854.6
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 3841.9
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 3833.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 3800.1
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 3796.5
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 3760.9
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 3758.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 3710.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 3657.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 3652.8
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 3651.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 3633.1
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 3626.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 3620.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 3580.0
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 3574.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 3540.9
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 3525.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 3511.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 3487.9
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 3466.1
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 3465.1
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 3456.5
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 3450.1
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 3436.1
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 3432.2
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 3430.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 3426.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 3420.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 3411.1
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 3368.1
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 3329.8
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 3321.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 3319.3
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 3278.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 3209.5
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 3188.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 3179.9
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 3163.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 3129.5
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 3121.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 3118.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 3107.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 3078.0
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 3049.4
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 3040.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 3011.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 3002.0
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 2925.8
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 2919.0
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 2901.2
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 2870.7
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 2862.6
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 2858.1
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 2814.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 2806.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 2785.9
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 2768.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 2677.5
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 2643.6
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 2576.2
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 2575.3
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 2387.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 1800.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 1777.2
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

37.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 37.4
FF:10181-103D1 60 years, female 37.5
FF:10159-103A6 76 years, female 37.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org