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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
2180.2
nTPM
FANTOM5:
26.0
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2180.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 1918.9
2090
Male, age 80, both hemispheres
2277.6
2301
Female, age 85, both hemispheres
2042.7
2188
Female, age 91, both hemispheres
1837.8
1984
Male, age 76, both hemispheres
1517.5
Dorsal cochlear nucleus nTPM: 2180.2
2802
Male, age 74, right hemisphere
2773.1
2378
Male, age 80, both hemispheres
2375.8
2187
Female, age 91, both hemispheres
2028.7
2370
Male, age 61, both hemispheres
1936.6
2058
Male, age 76, both hemispheres
1786.5
Dorsal tegmental nucleus nTPM: 1887.6
2326
Male, age 74, both hemispheres
2358.0
2083
Male, age 80, both hemispheres
2067.5
1936
Male, age 76, left hemisphere
1629.8
2358
Male, age 61, both hemispheres
1495.1
Dorsolateral tegmental area nTPM: 2010.7
2337
Male, age 61, both hemispheres
2416.1
2654
Male, age 80, both hemispheres
2175.5
2360
Male, age 74, both hemispheres
2119.4
2751
Female, age 85, both hemispheres
1936.2
2141
Male, age 76, both hemispheres
1406.2
Kolliker-Fuse nucleus nTPM: 1825.3
2315
Male, age 76, right hemisphere
2545.5
2793
Female, age 91, left hemisphere
1488.2
2163
Male, age 80, both hemispheres
1442.2
Lateral lemniscal nuclei nTPM: 1489.0
2746
Female, age 85, left hemisphere
1734.8
2036
Male, age 80, both hemispheres
1531.2
2320
Female, age 91, left hemisphere
1471.2
2453
Male, age 74, right hemisphere
1413.0
2169
Male, age 76, both hemispheres
1295.0
Lateral parabrachial nucleus nTPM: 1961.7
2792
Male, age 76, both hemispheres
2307.4
2013
Male, age 80, both hemispheres
2203.5
2139
Female, age 85, right hemisphere
1837.7
2790
Male, age 61, both hemispheres
1498.3
Lateral vestibular nucleus nTPM: 1763.8
2311
Male, age 80, both hemispheres
2169.3
2184
Male, age 76, both hemispheres
1358.2
Locus coeruleus nTPM: 1558.5
2317
Female, age 72, unknown
1826.9
2162
Male, age 80, both hemispheres
1685.7
2123
Female, age 91, both hemispheres
1662.7
2720
Male, age 74, both hemispheres
1582.1
2014
Male, age 55, unknown
1523.4
1980
Male, age 76, both hemispheres
1359.0
2788
Male, age 74, unknown
1269.5
Medial parabrachial nucleus nTPM: 1669.1
2170
Female, age 91, both hemispheres
2044.8
2463
Female, age 85, right hemisphere
1811.2
2854
Male, age 80, both hemispheres
1557.0
2786
Male, age 76, both hemispheres
1498.6
2156
Male, age 61, both hemispheres
1433.9
Medial periolivary nuclei nTPM: 1623.2
2081
Male, age 80, both hemispheres
1832.7
2063
Male, age 76, both hemispheres
1810.7
2791
Male, age 74, right hemisphere
1634.2
2458
Female, age 91, both hemispheres
1611.1
2171
Female, age 85, both hemispheres
1227.2
Motor facial nucleus nTPM: 1645.5
2126
Male, age 61, both hemispheres
2104.7
2795
Female, age 91, both hemispheres
1918.8
2365
Male, age 74, right hemisphere
1663.2
2062
Male, age 76, both hemispheres
1651.6
2697
Female, age 85, both hemispheres
1350.7
2327
Male, age 80, both hemispheres
1184.0
Motor trigeminal nucleus nTPM: 1623.0
2560
Male, age 74, both hemispheres
1780.9
2321
Female, age 91, both hemispheres
1777.7
2335
Male, age 61, both hemispheres
1676.6
2309
Male, age 76, both hemispheres
1504.0
2079
Male, age 80, both hemispheres
1376.0
Nuclei of the trapezoid body nTPM: 1602.4
1983
Male, age 76, both hemispheres
1884.7
2368
Female, age 91, both hemispheres
1757.4
2166
Male, age 80, both hemispheres
1554.9
2159
Male, age 61, both hemispheres
1505.6
2735
Female, age 85, both hemispheres
1309.2
Nucleus raphe magnus nTPM: 1490.4
2459
Female, age 91, both hemispheres
1765.8
2051
Male, age 76, both hemispheres
1742.7
2328
Male, age 80, both hemispheres
1459.4
2455
Male, age 74, both hemispheres
1427.9
2160
Male, age 61, both hemispheres
1366.5
2172
Female, age 85, both hemispheres
1179.8
Paramedian reticular nucleus nTPM: 1686.7
2057
Male, age 80, both hemispheres
1901.8
2313
Male, age 61, both hemispheres
1796.4
2052
Male, age 76, both hemispheres
1668.4
2050
Female, age 85, both hemispheres
1380.3
Pedunculopontine tegmental nucleus nTPM: 1719.2
2338
Male, age 61, both hemispheres
1933.4
2334
Male, age 80, both hemispheres
1880.7
1921
Female, age 85, both hemispheres
1343.5
Pontine nuclei nTPM: 1713.0
2115
Male, age 80, left hemisphere
1926.8
2109
Female, age 72, unknown
1884.7
2319
Female, age 91, both hemispheres
1820.2
2454
Male, age 74, left hemisphere
1704.9
1968
Male, age 76, left hemisphere
1664.6
2727
Male, age 61, right hemisphere
1634.4
1863
Male, age 55, unknown
1574.3
2787
Female, age 85, both hemispheres
1493.8
Pontine raphe nucleus nTPM: 1495.8
2122
Female, age 85, midline
1520.4
2853
Male, age 76, midline
1471.1
Posteroventral cochlear nucleus nTPM: 2006.5
2341
Male, age 80, both hemispheres
2282.8
2371
Male, age 61, both hemispheres
2250.7
2135
Female, age 91, both hemispheres
2062.8
2752
Female, age 85, both hemispheres
1741.0
2070
Male, age 76, both hemispheres
1695.4
Principal sensory trigeminal nucleus nTPM: 1399.3
2158
Male, age 61, both hemispheres
1478.8
2367
Female, age 91, left hemisphere
1452.8
2324
Male, age 76, both hemispheres
1394.6
2008
Male, age 80, left hemisphere
1271.1
Reticular pontine nucleus, caudal nTPM: 1580.1
2092
Male, age 76, both hemispheres
1823.1
2559
Male, age 74, both hemispheres
1789.8
2457
Female, age 91, both hemispheres
1520.7
2332
Male, age 80, right hemisphere
1186.7
Reticular pontine nucleus, oral nTPM: 1615.9
2361
Male, age 74, both hemispheres
1856.1
1939
Male, age 80, both hemispheres
1702.7
2167
Male, age 76, both hemispheres
1613.2
2366
Female, age 91, both hemispheres
1484.1
2012
Female, age 85, both hemispheres
1423.4
Reticulotegmental nucleus nTPM: 1720.5
2452
Male, age 74, both hemispheres
2019.2
2322
Female, age 91, both hemispheres
1811.4
2333
Male, age 80, both hemispheres
1660.6
2325
Male, age 76, both hemispheres
1390.8
Spinal trigeminal nucleus, oral nTPM: 1494.0
2164
Male, age 80, both hemispheres
1669.5
1978
Male, age 76, both hemispheres
1538.8
2737
Female, age 85, both hemispheres
1273.7
Subcoeruleus area nTPM: 1688.1
2451
Male, age 74, both hemispheres
2387.8
2369
Female, age 85, left hemisphere
1837.3
1958
Male, age 80, both hemispheres
1505.2
2089
Male, age 76, left hemisphere
1355.3
2323
Female, age 91, left hemisphere
1355.2
Superior olive nTPM: 1541.5
2020
Male, age 76, both hemispheres
1849.7
2364
Male, age 74, right hemisphere
1790.0
2561
Female, age 91, both hemispheres
1486.8
2329
Male, age 80, right hemisphere
1421.0
1875
Female, age 85, both hemispheres
1160.1
Ventral periolivary nuclei nTPM: 1459.3
2023
Male, age 76, both hemispheres
1943.1
2794
Female, age 91, left hemisphere
1449.8
2165
Male, age 80, both hemispheres
1381.4
2130
Female, age 85, both hemispheres
1063.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 1671.4
2359
Male, age 61, both hemispheres
1952.8
2456
Female, age 91, both hemispheres
1927.3
2161
Male, age 80, both hemispheres
1782.0
1959
Male, age 76, both hemispheres
1511.1
2449
Male, age 74, both hemispheres
1438.8
2840
Female, age 85, both hemispheres
1416.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
