HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:203.2 nTPM
HPA Brain:106.1 nTPM
GTEx:203.2 nTPM
FANTOM5:33.5 Scaled Tags Per Million
Pig:76.2 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 106.1
Sample id Sample description nTPM
Hippocampus
nTPM: 88.0
1898 Male, age 80, left hemisphere 124.8
2621 Female, age 67, right hemisphere 95.2
1855 Male, age 76, left hemisphere 84.5
1911 Female, age 85, right hemisphere 82.6
2148 Female, age 91, left hemisphere 70.7
2529 Female, age 94, left hemisphere 69.9
Dentate gyrus
nTPM: 90.5
1927 Female, age 91, both hemispheres 114.2
2010 Male, age 76, both hemispheres 99.3
2530 Female, age 94, left hemisphere 99.2
2246 Female, age 85, both hemispheres 84.2
2531 Female, age 67, both hemispheres 73.9
2528 Male, age 74, both hemispheres 71.9
Entorhinal gyrus
nTPM: 79.0
2764 Male, age 80, right hemisphere 91.9
1938 Female, age 85, left hemisphere 89.5
1787 Male, age 76, left hemisphere 85.4
2613 Female, age 94, left hemisphere 82.5
2117 Female, age 91, right hemisphere 64.5
2686 Male, age 75, right hemisphere 60.0
Hippocampus, CA1
nTPM: 106.1
2749 Male, age 80, left hemisphere 175.9
2045 Male, age 76, both hemispheres 96.1
2527 Male, age 74, both hemispheres 95.0
1873 Female, age 85, both hemispheres 94.8
2082 Female, age 91, right hemisphere 68.7
Hippocampus, CA2
nTPM: 97.5
1892 Male, age 76, both hemispheres 132.5
1963 Male, age 80, left hemisphere 110.9
2249 Male, age 74, both hemispheres 106.1
2437 Female, age 94, left hemisphere 94.2
1940 Female, age 85, left hemisphere 75.2
2113 Female, age 91, right hemisphere 66.2
Hippocampus, CA3
nTPM: 101.2
2436 Male, age 74, both hemispheres 142.3
1867 Male, age 76, both hemispheres 109.3
2137 Male, age 80, left hemisphere 109.1
2620 Female, age 94, left hemisphere 96.4
1891 Female, age 85, both hemispheres 88.7
2861 Female, age 67, both hemispheres 61.5
Parahippocampal cortex
nTPM: 82.4
1850 Male, age 80, both hemispheres 103.2
1933 Female, age 85, both hemispheres 99.0
2245 Female, age 91, both hemispheres 87.1
1990 Female, age 91, right hemisphere 85.8
2018 Male, age 76, both hemispheres 84.9
2250 Female, age 67, right hemisphere 83.6
2693 Female, age 94, both hemispheres 80.3
2532 Female, age 72, left hemisphere 75.6
2622 Female, age 67, right hemisphere 71.7
2692 Male, age 74, both hemispheres 52.8
Perirhinal gyrus
nTPM: 97.3
1847 Female, age 91, left hemisphere 128.9
1841 Female, age 85, right hemisphere 103.1
1794 Male, age 80, right hemisphere 99.3
2848 Male, age 76, right hemisphere 79.3
2521 Female, age 94, right hemisphere 76.0
Subiculum
nTPM: 84.9
1901 Male, age 80, both hemispheres 115.0
1977 Female, age 85, both hemispheres 98.0
2042 Male, age 76, both hemispheres 87.3
2619 Male, age 74, both hemispheres 79.8
2438 Female, age 94, left hemisphere 73.5
2729 Female, age 91, right hemisphere 55.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 203.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 203.2
Samples: 197

Max nTPM: 500.1
Min nTPM: 77.9
Std nTPM: 85.1
Median nTPM: 193.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 500.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 495.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 460.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 460.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 436.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 418.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 416.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 381.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 379.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 370.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 365.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 33.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.5
FF:10169-103B7 60 years, female 42.5
FF:10153-102I9 76 years, female 24.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 76.2
Pig sample Sample description nTPM
Subiculum
nTPM: 60.1
Samples: 4

Max nTPM: 84.0
Min nTPM: 48.8
Sample A Female 84.0
Sample B Female 50.8
Sample C Male 56.7
Sample D Male 48.8
Dorsal hippocampus
nTPM: 76.2
Samples: 4

Max nTPM: 99.3
Min nTPM: 57.9
Sample A Female 99.3
Sample B Female 66.4
Sample C Male 81.3
Sample D Male 57.9
Entorhinal cortex
nTPM: 67.1
Samples: 4

Max nTPM: 78.7
Min nTPM: 59.1
Sample A Female 69.7
Sample B Female 78.7
Sample C Male 60.7
Sample D Male 59.1
Ventral hippocampus
nTPM: 72.3
Samples: 4

Max nTPM: 90.7
Min nTPM: 44.0
Sample A Female 79.9
Sample B Female 44.0
Sample C Male 90.7
Sample D Male 74.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org