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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
113.4
nTPM
GTEx:
113.4
nTPM
FANTOM5:
12.7
Scaled Tags Per Million
Pig:
39.0
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
113.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 113.4
Samples: 105
Max nTPM: 220.9
Min nTPM: 48.1
Std nTPM: 28.1
Median nTPM:
153_1
70 years, female
220.9
377_1
82 years, female
182.0
246_1
77 years, male
168.8
425_1
59 years, female
167.2
229_1
69 years, female
167.1
189_1
76 years, male
159.6
163_1
78 years, male
156.4
9_1
66 years, female
155.4
162_1
79 years, female
153.5
115_1
83 years, male
152.7
18_1
88 years, male
152.2
266_1
85 years, male
148.5
126_1
63 years, male
148.0
243_1
75 years, male
144.8
352_1
62 years, male
142.6
177_1
74 years, male
142.5
405_1
91 years, male
140.8
406_1
79 years, male
139.5
172_1
72 years, female
138.9
414_1
84 years, female
138.4
217_1
76 years, male
138.3
321_1
62 years, female
137.3
6_1
73 years, female
135.4
109_1
81 years, female
133.7
319_1
81 years, male
131.8
468_1
89 years, male
131.6
237_1
82 years, male
131.4
142_1
61 years, female
131.2
376_1
75 years, female
127.0
322_1
76 years, male
124.1
394_1
75 years, female
124.1
404_1
82 years, female
123.6
81_1
67 years, male
123.5
286_1
68 years, female
123.2
2_1
77 years, female
121.6
503_1
68 years, male
120.9
318_1
68 years, male
119.5
316_1
62 years, male
118.2
526_1
61 years, male
118.1
324_1
76 years, male
118.0
313_1
79 years, female
117.5
335_1
73 years, female
117.5
499_1
55 years, female
117.4
375_1
74 years, female
116.2
349_1
83 years, male
115.9
4_1
88 years, female
115.4
35_1
74 years, female
115.2
517_1
88 years, male
114.7
117_1
61 years, male
114.6
518_1
75 years, female
114.5
89_1
63 years, male
111.5
480_1
63 years, male
110.9
265_1
87 years, male
110.7
355_1
70 years, female
110.0
293_1
68 years, female
109.8
218_1
71 years, female
109.5
396_1
62 years, male
108.6
350_1
84 years, female
108.2
32_1
67 years, male
107.0
264_1
73 years, female
106.3
415_1
77 years, female
106.0
42_1
85 years, male
105.1
413_1
59 years, female
104.4
145_1
84 years, male
102.7
291_1
76 years, male
102.2
466_1
57 years, female
102.2
139_1
64 years, female
101.2
251_1
78 years, male
100.5
386_1
76 years, male
100.4
320_1
89 years, female
100.2
389_1
86 years, female
100.1
99_1
64 years, male
100.0
17_1
71 years, male
99.6
292_1
71 years, male
99.2
506_1
65 years, male
97.5
254_1
77 years, female
97.3
501_1
88 years, male
96.6
311_1
78 years, male
95.7
351_1
91 years, male
92.8
149_1
88 years, male
92.2
137_1
83 years, male
92.1
356_1
87 years, female
91.6
315_1
62 years, female
90.9
354_1
81 years, female
90.9
288_1
66 years, female
90.3
379_1
60 years, male
89.4
307_1
66 years, female
87.5
353_1
82 years, female
87.4
173_1
67 years, male
86.4
308_1
70 years, female
86.1
120_1
70 years, female
85.8
452_1
88 years, female
85.8
490_1
67 years, female
84.3
384_1
83 years, male
84.2
447_1
81 years, male
83.4
43_1
64 years, female
81.8
348_1
84 years, male
80.3
119_1
70 years, female
77.0
347_1
72 years, male
76.0
495_1
57 years, female
75.3
295_1
61 years, female
66.7
41_1
94 years, female
66.0
317_1
60 years, male
63.7
491_1
89 years, female
52.9
314_1
67 years, male
48.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
