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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:163.8 nTPM
HPA Brain:266.3 nTPM
GTEx:163.8 nTPM
FANTOM5:229.8 Scaled Tags Per Million
Pig:136.3 nTPM
Mouse:374.1 nTPM
Allen mouse:25.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA068843Antibody CAB004587
Glial cells Not detectedNot detected
Neuronal cells LowNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

266.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 189.1
2481 Female, age 94, left hemisphere 309.6
2289 Male, age 61, right hemisphere 198.6
1781 Male, age 74, unknown 191.9
2288 Male, age 75, left hemisphere 187.8
2290 Female, age 72, unknown 160.6
1854 Male, age 80, left hemisphere 157.4
1857 Female, age 85, left hemisphere 154.0
2846 Female, age 79, unknown 152.5
Globus pallidus, externus
nTPM: 266.3
2772 Female, age 79, unknown 319.4
1996 Male, age 80, right hemisphere 317.6
2646 Male, age 61, right hemisphere 268.0
2395 Male, age 75, both hemispheres 239.6
2567 Female, age 72, unknown 186.8
Globus pallidus, internus
nTPM: 255.8
2483 Female, age 94, right hemisphere 342.8
2287 Male, age 75, right hemisphere 273.6
2778 Female, age 91, both hemispheres 259.6
2111 Female, age 85, right hemisphere 246.9
1818 Male, age 74, unknown 246.1
2037 Male, age 80, right hemisphere 225.1
2566 Female, age 72, unknown 196.2
Nucleus accumbens
nTPM: 169.5
2286 Male, age 75, left hemisphere 226.9
2391 Female, age 94, left hemisphere 193.7
2732 Male, age 80, right hemisphere 192.8
2698 Female, age 72, unknown 157.4
1806 Female, age 85, left hemisphere 156.2
1783 Male, age 74, unknown 153.4
1856 Female, age 91, right hemisphere 140.8
2824 Male, age 61, right hemisphere 135.0
Nucleus basalis of Meynert
nTPM: 185.1
2569 Male, age 61, both hemispheres 251.4
2484 Female, age 94, left hemisphere 197.1
2821 Male, age 75, both hemispheres 162.8
2393 Male, age 80, right hemisphere 129.0
Nucleus of the diagonal band
nTPM: 147.6
1812 Female, age 91, both hemispheres 188.8
2775 Male, age 80, right hemisphere 180.0
1979 Male, age 74, unknown 140.3
2195 Female, age 85, both hemispheres 125.8
2029 Male, age 61, right hemisphere 103.4
Putamen
nTPM: 172.2
2482 Female, age 94, left hemisphere 265.1
2466 Female, age 79, unknown 170.5
1937 Female, age 91, right hemisphere 168.9
2647 Male, age 75, left hemisphere 165.4
2489 Female, age 72, unknown 160.1
1829 Male, age 74, unknown 147.1
1838 Male, age 80, right hemisphere 128.2
Septal nuclei
nTPM: 149.7
2031 Female, age 72, unknown 192.0
2009 Female, age 91, both hemispheres 167.3
1960 Male, age 74, unknown 166.8
2199 Male, age 80, right hemisphere 142.5
2059 Female, age 85, both hemispheres 131.3
2629 Female, age 94, right hemisphere 125.9
2394 Male, age 61, left hemisphere 121.8
Stria terminalis, bed nucleus
nTPM: 153.3
1974 Female, age 91, both hemispheres 189.3
2486 Female, age 94, both hemispheres 141.8
2201 Male, age 74, unknown 128.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

163.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 151.4
Samples: 246

Max nTPM: 463.0
Min nTPM: 66.1
Std nTPM: 47.1
Median nTPM: 140.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 463.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 411.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 326.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 313.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 307.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 281.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 266.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 265.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 264.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 264.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 242.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 237.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 236.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 230.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 229.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 218.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 216.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 212.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 212.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 209.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 209.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 206.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 206.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 204.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 203.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 201.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 199.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 197.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 197.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 197.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 196.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 193.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 192.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 189.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 187.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 187.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 185.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 183.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 183.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 182.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 177.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 177.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 176.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 174.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 174.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 172.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 171.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 169.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 169.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 168.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 167.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 166.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 166.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 165.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 165.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 164.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 164.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 163.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 163.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 163.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 161.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 161.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 161.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 160.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 160.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 160.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 159.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 159.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 158.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 158.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 158.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 157.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 156.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 156.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 156.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 156.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 155.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 155.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 155.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 154.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 154.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 154.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 154.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 153.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 153.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 153.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 153.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 153.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 152.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 152.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 152.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 151.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 151.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 151.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 150.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 150.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 149.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 149.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 148.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 148.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 148.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 148.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 147.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 147.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 147.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 146.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 146.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 145.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 145.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 145.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 144.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 144.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 144.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 143.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 143.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 143.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 142.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 141.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 141.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 141.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 141.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 141.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 141.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 140.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 140.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 140.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 140.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 139.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 139.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 139.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 139.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 139.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 139.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 138.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 137.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 137.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 137.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 136.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 136.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 135.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 135.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 134.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 134.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 134.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 134.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 134.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 134.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 133.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 133.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 133.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 132.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 132.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 132.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 132.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 131.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 131.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 131.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 131.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 130.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 129.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 129.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 129.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 128.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 128.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 128.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 128.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 127.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 127.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 127.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 127.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 127.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 127.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 127.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 126.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 126.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 125.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 125.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 125.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 125.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 125.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 125.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 125.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 125.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 124.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 124.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 124.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 124.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 123.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 123.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 123.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 122.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 122.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 122.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 122.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 122.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 122.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 121.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 121.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 121.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 121.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 120.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 120.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 119.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 118.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 118.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 118.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 118.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 117.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 117.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 117.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 117.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 117.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 117.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 116.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 116.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 115.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 115.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 115.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 114.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 113.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 112.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 112.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 111.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 111.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 109.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 109.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 108.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 108.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 107.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 106.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 105.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 105.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 104.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 103.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 103.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 103.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 101.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 101.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 101.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 99.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 99.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 97.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 92.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 83.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 68.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 66.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 147.3
Samples: 246

Max nTPM: 482.6
Min nTPM: 85.1
Std nTPM: 44.3
Median nTPM: 137.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 482.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 303.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 303.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 300.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 282.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 280.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 277.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 272.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 264.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 254.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 251.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 231.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 231.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 228.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 222.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 222.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 218.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 213.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 212.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 207.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 204.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 204.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 196.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 195.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 193.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 188.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 183.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 181.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 181.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 179.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 179.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 178.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 178.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 177.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 177.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 175.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 174.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 174.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 173.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 172.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 172.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 169.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 168.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 167.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 167.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 166.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 166.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 166.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 166.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 165.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 164.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 164.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 164.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 163.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 163.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 162.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 161.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 161.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 159.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 159.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 158.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 158.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 157.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 156.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 156.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 155.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 155.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 155.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 155.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 154.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 154.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 153.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 153.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 153.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 152.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 152.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 151.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 151.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 150.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 149.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 148.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 148.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 147.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 147.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 147.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 147.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 147.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 147.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 146.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 146.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 146.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 145.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 145.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 145.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 145.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 145.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 144.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 144.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 144.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 143.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 143.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 143.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 143.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 142.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 142.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 142.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 142.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 141.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 141.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 141.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 141.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 141.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 140.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 140.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 140.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 140.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 139.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 138.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 137.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 137.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 137.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 137.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 137.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 136.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 136.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 136.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 136.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 136.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 135.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 135.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 135.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 135.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 135.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 135.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 135.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 134.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 134.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 133.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 133.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 133.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 132.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 131.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 131.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 131.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 131.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 130.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 130.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 129.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 129.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 129.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 128.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 128.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 128.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 128.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 128.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 127.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 127.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 127.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 127.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 127.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 126.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 126.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 126.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 124.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 124.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 124.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 124.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 124.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 124.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 124.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 123.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 123.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 123.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 123.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 123.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 122.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 122.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 122.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 122.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 122.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 122.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 122.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 122.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 121.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 121.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 121.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 121.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 121.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 121.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 121.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 121.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 121.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 120.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 120.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 120.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 120.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 119.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 119.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 119.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 119.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 118.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 118.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 118.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 118.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 117.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 117.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 117.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 117.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 117.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 117.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 116.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 115.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 114.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 114.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 114.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 114.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 113.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 112.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 111.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 111.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 111.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 110.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 109.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 109.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 109.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 108.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 108.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 107.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 107.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 105.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 103.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 102.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 102.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 100.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 100.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 99.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 98.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 98.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 98.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 98.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 98.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 98.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 94.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 91.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 90.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 85.1
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Brain - Putamen (basal ganglia)
Average nTPM: 163.8
Samples: 205

Max nTPM: 576.9
Min nTPM: 80.5
Std nTPM: 53.7
Median nTPM: 154.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 576.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 388.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 377.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 354.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 330.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 305.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 301.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 276.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 256.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 244.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 239.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 239.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 233.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 226.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 223.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 220.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 219.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 213.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 211.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 207.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 207.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 207.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 204.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 202.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 200.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 200.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 200.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 198.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 194.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 194.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 193.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 192.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 192.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 192.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 191.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 191.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 190.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 190.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 190.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 188.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 185.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 183.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 181.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 181.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 180.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 180.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 179.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 179.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 178.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 178.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 177.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 177.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 175.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 175.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 175.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 175.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 174.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 173.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 173.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 172.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 172.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 172.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 171.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 171.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 170.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 169.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 169.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 167.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 167.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 166.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 166.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 166.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 165.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 165.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 165.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 164.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 164.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 164.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 164.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 164.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 164.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 163.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 163.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 161.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 161.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 161.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 161.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 160.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 160.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 159.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 159.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 159.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 158.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 158.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 157.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 157.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 157.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 156.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 156.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 155.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 155.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 155.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 154.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 154.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 153.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 153.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 153.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 152.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 152.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 152.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 152.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 152.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 151.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 151.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 150.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 149.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 149.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 149.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 148.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 148.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 147.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 147.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 146.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 146.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 146.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 145.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 145.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 145.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 145.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 144.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 144.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 144.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 143.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 143.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 142.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 142.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 142.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 141.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 141.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 140.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 140.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 140.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 140.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 139.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 138.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 138.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 137.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 136.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 135.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 135.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 135.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 135.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 134.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 134.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 134.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 134.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 133.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 133.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 132.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 132.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 132.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 131.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 131.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 130.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 130.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 130.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 128.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 127.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 125.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 125.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 125.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 125.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 124.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 124.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 124.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 122.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 121.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 121.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 120.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 119.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 119.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 119.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 118.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 118.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 117.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 117.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 116.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 116.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 115.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 114.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 114.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 114.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 113.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 113.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 110.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 108.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 107.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 105.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 105.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 103.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 100.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 95.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 94.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 84.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 80.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

229.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 192.9
FF:10164-103B2 76 years, female 192.9
Nucleus accumbens
Scaled Tags Per Million: 169.5
FF:10037-101F1 23-56 years, mixed 169.5
Putamen
Scaled Tags Per Million: 138.3
FF:10176-103C5 60 years, female 138.3
Globus pallidus
Scaled Tags Per Million: 229.8
FF:10175-103C4 60 years, female 243.2
FF:10161-103A8 76 years, female 216.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

136.3
Pig sample Sample description nTPM
Caudate
nTPM: 100.3
Samples: 4

Max nTPM: 112.2
Min nTPM: 88.4
Sample A Female 95.4
Sample B Female 105.3
Sample C Male 112.2
Sample D Male 88.4
Putamen
nTPM: 133.2
Samples: 4

Max nTPM: 167.1
Min nTPM: 88.1
Sample A Female 167.1
Sample B Female 88.1
Sample C Male 144.0
Sample D Male 133.5
Septum
nTPM: 136.3
Samples: 4

Max nTPM: 168.3
Min nTPM: 107.1
Sample A Female 125.0
Sample B Female 107.1
Sample C Male 168.3
Sample D Male 144.8
Ventral pallidum
nTPM: 126.0
Samples: 4

Max nTPM: 161.7
Min nTPM: 85.9
Sample A Female 85.9
Sample B Female 129.5
Sample C Male 161.7
Sample D Male 126.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

374.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 312.4
Samples: 4

Max nTPM: 329.0
Min nTPM: 302.1
Sample A Male 308.7
Sample B Male 329.0
Sample C Female 302.1
Sample D Female 309.6
Septum
nTPM: 374.1
Samples: 4

Max nTPM: 390.4
Min nTPM: 359.2
Sample A Male 390.4
Sample B Male 379.7
Sample C Female 367.0
Sample D Female 359.2
Ventral forebrain
nTPM: 317.2
Samples: 4

Max nTPM: 332.6
Min nTPM: 305.8
Sample A Male 305.8
Sample B Male 332.6
Sample C Female 323.2
Sample D Female 307.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

25.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 24.5
293263 Antisense, RP_040617_01_A10, Mouse strain C57BL/6J (56 days, male) 24.5
Pallidum
Expression energy: 25.0
293263 Antisense, RP_040617_01_A10, Mouse strain C57BL/6J (56 days, male) 25.0

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