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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:151.4 nTPM
FANTOM5:192.9 Scaled Tags Per Million
Pig:100.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA068843Antibody CAB004587
Glial cells Not detectedNot detected
Neuronal cells LowNot detected




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

151.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 151.4
Samples: 246

Max nTPM: 463.0
Min nTPM: 66.1
Std nTPM: 47.1
Median nTPM: 140.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 463.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 411.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 326.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 313.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 307.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 281.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 266.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 265.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 264.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 264.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 242.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 237.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 236.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 230.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 229.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 218.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 216.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 212.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 212.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 209.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 209.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 206.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 206.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 204.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 203.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 201.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 199.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 197.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 197.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 197.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 196.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 193.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 192.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 189.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 187.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 187.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 185.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 183.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 183.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 182.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 177.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 177.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 176.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 174.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 174.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 172.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 171.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 169.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 169.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 168.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 167.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 166.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 166.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 165.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 165.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 164.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 164.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 163.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 163.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 163.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 161.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 161.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 161.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 160.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 160.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 160.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 159.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 159.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 158.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 158.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 158.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 157.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 156.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 156.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 156.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 156.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 155.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 155.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 155.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 154.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 154.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 154.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 154.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 153.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 153.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 153.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 153.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 153.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 152.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 152.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 152.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 151.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 151.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 151.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 150.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 150.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 149.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 149.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 148.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 148.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 148.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 148.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 147.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 147.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 147.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 146.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 146.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 145.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 145.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 145.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 144.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 144.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 144.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 143.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 143.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 143.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 142.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 141.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 141.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 141.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 141.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 141.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 141.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 140.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 140.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 140.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 140.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 139.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 139.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 139.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 139.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 139.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 139.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 138.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 137.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 137.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 137.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 136.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 136.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 135.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 135.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 134.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 134.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 134.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 134.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 134.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 134.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 133.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 133.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 133.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 132.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 132.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 132.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 132.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 131.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 131.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 131.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 131.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 130.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 129.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 129.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 129.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 128.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 128.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 128.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 128.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 127.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 127.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 127.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 127.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 127.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 127.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 127.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 126.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 126.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 125.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 125.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 125.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 125.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 125.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 125.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 125.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 125.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 124.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 124.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 124.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 124.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 123.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 123.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 123.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 122.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 122.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 122.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 122.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 122.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 122.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 121.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 121.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 121.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 121.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 120.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 120.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 119.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 118.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 118.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 118.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 118.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 117.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 117.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 117.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 117.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 117.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 117.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 116.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 116.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 115.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 115.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 115.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 114.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 113.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 112.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 112.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 111.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 111.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 109.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 109.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 108.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 108.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 107.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 106.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 105.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 105.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 104.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 103.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 103.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 103.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 101.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 101.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 101.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 99.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 99.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 97.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 92.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 83.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 68.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 66.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

192.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 192.9
FF:10164-103B2 76 years, female 192.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.3
Pig sample Sample description nTPM
Caudate
nTPM: 100.3
Samples: 4

Max nTPM: 112.2
Min nTPM: 88.4
Sample A Female 95.4
Sample B Female 105.3
Sample C Male 112.2
Sample D Male 88.4

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