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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:306.4 nTPM
GTEx:306.4 nTPM
FANTOM5:31.3 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB011689
Squamous epithelial cells Medium



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

306.4
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 306.4
Samples: 156

Max nTPM: 995.3
Min nTPM: 96.2
Std nTPM: 135.3
Median nTPM: 271.7
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 995.3
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 649.2
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 634.7
GTEX-14PKU-1326-SM-6871B 40-49 years, female 633.3
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 571.7
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 569.0
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 562.4
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 553.9
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 543.6
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 517.4
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 516.2
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 515.8
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 504.5
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 496.9
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 491.6
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 483.0
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 482.9
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 477.0
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 476.1
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 475.6
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 466.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 446.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 439.3
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 438.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 434.0
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 432.8
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 432.7
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 431.5
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 423.5
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 423.3
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 422.0
GTEX-S341-1226-SM-4AD5S 40-49 years, female 415.3
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 412.4
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 412.0
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 408.5
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 405.8
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 404.1
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 396.4
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 389.2
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 378.6
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 374.5
GTEX-1C475-0526-SM-793AC 40-49 years, female 372.5
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 370.6
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 369.1
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 368.6
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 360.3
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 358.8
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 357.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 354.0
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 352.5
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 351.3
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 351.1
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 348.7
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 347.1
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 345.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 342.3
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 339.9
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 339.0
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 333.1
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 328.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 324.9
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 324.6
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 320.9
GTEX-QCQG-1226-SM-48U23 50-59 years, female 320.8
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 314.7
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 307.7
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 304.7
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 301.1
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 297.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 292.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 290.9
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 289.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 289.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 285.1
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 280.7
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 275.4
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 274.6
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 272.2
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 271.2
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 270.9
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 270.2
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 269.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 269.3
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 267.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 266.1
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 265.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 259.8
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 257.1
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 254.5
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 253.3
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 251.6
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 249.7
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 248.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 244.6
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 243.5
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 243.0
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 242.5
GTEX-16NPV-2526-SM-6M483 50-59 years, female 238.2
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 237.8
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 236.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 236.8
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 236.4
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 234.0
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 232.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 231.2
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 230.2
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 228.5
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 227.9
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 225.4
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 221.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 219.1
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 218.3
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 217.8
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 215.6
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 215.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 214.7
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 206.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 206.7
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 206.4
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 206.2
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 204.9
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 201.7
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 201.6
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 200.1
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 199.9
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 198.4
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 197.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 195.0
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 193.5
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 189.7
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 188.7
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 185.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 178.2
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 174.2
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 170.0
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 170.0
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 164.4
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 163.9
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 161.1
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 158.6
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 157.8
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 149.0
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 147.1
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 145.8
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 145.2
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 136.7
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 133.2
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 130.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 127.7
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 125.2
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 121.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 117.6
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 115.5
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 112.4
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 102.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 96.2
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

31.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 31.3
FF:10204-103F6 68 years, female 31.3

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