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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:107.4 nTPM
HPA Brain:215.6 nTPM
GTEx:107.4 nTPM
FANTOM5:186.3 Scaled Tags Per Million
Pig:101.4 nTPM
Mouse:98.5 nTPM
Allen mouse:6.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA017087Antibody CAB025786
Glial cells LowNot detected
Neuronal cells MediumNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

215.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 127.8
1857 Female, age 85, left hemisphere 186.6
1854 Male, age 80, left hemisphere 140.6
2290 Female, age 72, unknown 138.8
2481 Female, age 94, left hemisphere 131.6
2289 Male, age 61, right hemisphere 122.1
1781 Male, age 74, unknown 108.3
2846 Female, age 79, unknown 102.2
2288 Male, age 75, left hemisphere 92.4
Globus pallidus, externus
nTPM: 215.6
2567 Female, age 72, unknown 269.2
2646 Male, age 61, right hemisphere 253.8
1996 Male, age 80, right hemisphere 249.2
2772 Female, age 79, unknown 178.5
2395 Male, age 75, both hemispheres 127.2
Globus pallidus, internus
nTPM: 179.4
2037 Male, age 80, right hemisphere 213.6
2566 Female, age 72, unknown 208.5
2483 Female, age 94, right hemisphere 204.4
1818 Male, age 74, unknown 192.9
2111 Female, age 85, right hemisphere 168.0
2287 Male, age 75, right hemisphere 153.0
2778 Female, age 91, both hemispheres 115.3
Nucleus accumbens
nTPM: 147.4
1806 Female, age 85, left hemisphere 195.3
2698 Female, age 72, unknown 174.1
2824 Male, age 61, right hemisphere 156.5
2732 Male, age 80, right hemisphere 153.4
1856 Female, age 91, right hemisphere 151.3
1783 Male, age 74, unknown 138.7
2286 Male, age 75, left hemisphere 117.2
2391 Female, age 94, left hemisphere 92.9
Nucleus basalis of Meynert
nTPM: 152.2
2569 Male, age 61, both hemispheres 290.6
2484 Female, age 94, left hemisphere 115.6
2393 Male, age 80, right hemisphere 103.1
2821 Male, age 75, both hemispheres 99.7
Nucleus of the diagonal band
nTPM: 120.0
1979 Male, age 74, unknown 155.8
2029 Male, age 61, right hemisphere 116.5
2195 Female, age 85, both hemispheres 115.7
1812 Female, age 91, both hemispheres 107.7
2775 Male, age 80, right hemisphere 104.5
Putamen
nTPM: 118.9
2647 Male, age 75, left hemisphere 160.2
1838 Male, age 80, right hemisphere 121.8
2482 Female, age 94, left hemisphere 120.9
1829 Male, age 74, unknown 117.5
2489 Female, age 72, unknown 112.6
1937 Female, age 91, right hemisphere 111.1
2466 Female, age 79, unknown 87.7
Septal nuclei
nTPM: 128.7
2199 Male, age 80, right hemisphere 169.2
2394 Male, age 61, left hemisphere 167.0
2059 Female, age 85, both hemispheres 152.6
1960 Male, age 74, unknown 114.0
2629 Female, age 94, right hemisphere 110.7
2031 Female, age 72, unknown 94.8
2009 Female, age 91, both hemispheres 92.4
Stria terminalis, bed nucleus
nTPM: 129.6
2201 Male, age 74, unknown 179.9
2486 Female, age 94, both hemispheres 109.6
1974 Female, age 91, both hemispheres 99.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

107.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 80.6
Samples: 246

Max nTPM: 202.7
Min nTPM: 26.2
Std nTPM: 27.9
Median nTPM: 76.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 202.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 175.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 172.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 167.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 164.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 153.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 145.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 140.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 140.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 138.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 137.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 137.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 134.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 132.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 130.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 128.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 122.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 120.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 120.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 120.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 119.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 118.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 117.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 116.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 114.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 114.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 114.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 114.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 113.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 109.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 108.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 108.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 107.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 106.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 106.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 105.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 104.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 104.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 103.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 103.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 103.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 103.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 102.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 102.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 102.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 101.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 101.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 101.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 101.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 101.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 99.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 99.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 98.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 97.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 96.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 96.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 96.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 96.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 96.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 96.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 96.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 96.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 96.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 95.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 95.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 95.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 94.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 94.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 94.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 93.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 93.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 93.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 93.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 91.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 91.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 91.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 90.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 90.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 90.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 89.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 89.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 89.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 89.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 89.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 88.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 88.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 87.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 87.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 86.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 86.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 85.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 85.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 84.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 84.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 84.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 83.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 83.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 83.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 82.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 82.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 82.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 82.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 82.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 81.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 81.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 81.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 81.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 81.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 80.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 80.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 79.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 79.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 78.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 78.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 78.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 78.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 78.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 77.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 77.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 77.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 77.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 77.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 76.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 76.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 76.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 75.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 75.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 75.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 75.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 75.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 74.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 74.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 74.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 73.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 73.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 73.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 73.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 73.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 72.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 72.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 72.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 72.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 72.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 71.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 71.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 70.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 70.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 70.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 70.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 70.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 70.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 70.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 69.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 69.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 69.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 69.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 69.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 68.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 68.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 68.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 68.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 68.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 67.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 67.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 67.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 66.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 66.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 65.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 65.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 65.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 64.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 64.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 63.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 63.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 63.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 62.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 62.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 62.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 62.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 62.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 62.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 61.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 61.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 61.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 60.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 60.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 60.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 60.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 60.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 59.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 59.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 58.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 58.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 58.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 58.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 58.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 57.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 57.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 56.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 56.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 56.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 55.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 55.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 55.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 55.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 54.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 54.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 54.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 54.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 54.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 54.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 54.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 53.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 53.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 53.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 53.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 52.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 52.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 52.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 52.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 52.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 50.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 50.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 50.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 48.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 48.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 47.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 46.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 46.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 46.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 46.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 44.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 44.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 43.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 43.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 40.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 40.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 39.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 38.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 38.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 35.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 31.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 30.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 28.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 26.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 26.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 107.4
Samples: 246

Max nTPM: 233.4
Min nTPM: 34.7
Std nTPM: 34.5
Median nTPM: 101.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 233.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 214.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 207.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 203.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 198.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 198.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 197.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 190.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 183.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 182.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 177.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 177.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 175.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 175.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 174.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 173.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 172.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 171.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 169.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 166.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 165.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 158.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 157.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 157.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 156.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 156.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 153.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 151.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 149.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 149.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 149.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 147.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 146.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 145.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 143.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 142.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 142.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 141.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 138.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 137.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 136.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 136.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 134.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 134.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 132.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 132.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 132.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 131.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 130.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 129.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 129.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 129.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 128.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 128.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 127.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 127.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 126.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 126.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 126.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 125.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 125.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 124.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 123.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 122.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 121.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 121.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 120.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 120.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 120.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 120.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 119.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 119.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 118.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 118.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 118.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 117.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 117.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 116.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 116.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 116.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 115.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 115.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 115.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 114.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 114.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 114.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 114.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 113.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 113.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 113.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 112.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 111.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 111.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 110.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 110.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 110.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 109.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 108.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 108.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 108.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 108.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 107.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 107.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 107.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 106.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 106.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 106.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 105.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 104.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 104.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 104.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 104.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 103.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 103.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 103.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 103.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 103.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 102.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 102.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 102.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 102.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 102.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 101.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 101.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 101.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 100.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 100.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 100.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 100.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 100.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 100.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 99.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 99.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 99.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 99.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 98.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 98.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 98.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 97.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 97.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 97.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 97.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 97.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 96.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 96.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 96.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 95.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 95.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 94.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 94.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 94.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 94.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 94.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 93.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 93.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 93.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 93.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 93.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 93.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 92.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 91.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 91.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 91.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 91.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 89.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 88.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 87.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 87.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 87.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 87.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 87.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 86.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 86.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 86.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 86.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 86.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 85.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 85.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 85.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 85.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 85.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 83.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 83.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 83.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 82.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 82.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 82.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 82.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 82.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 81.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 81.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 81.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 81.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 80.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 80.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 80.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 80.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 80.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 80.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 80.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 80.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 79.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 79.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 78.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 78.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 78.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 76.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 76.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 76.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 76.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 75.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 75.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 75.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 74.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 74.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 72.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 72.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 72.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 71.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 71.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 70.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 69.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 69.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 69.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 69.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 69.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 68.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 68.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 66.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 66.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 66.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 65.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 62.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 60.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 59.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 58.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 56.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 55.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 53.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 49.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 48.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 47.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 44.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 41.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 39.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 34.7
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Brain - Putamen (basal ganglia)
Average nTPM: 78.5
Samples: 205

Max nTPM: 171.8
Min nTPM: 16.1
Std nTPM: 28.5
Median nTPM: 76.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 171.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 171.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 166.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 162.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 161.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 149.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 145.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 143.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 139.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 131.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 131.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 128.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 127.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 126.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 123.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 123.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 115.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 114.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 113.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 113.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 113.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 112.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 111.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 109.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 108.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 108.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 107.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 106.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 106.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 106.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 105.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 105.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 105.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 104.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 104.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 103.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 100.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 100.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 100.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 99.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 99.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 99.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 97.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 97.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 96.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 94.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 94.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 93.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 93.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 93.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 93.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 92.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 92.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 91.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 91.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 91.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 90.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 90.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 90.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 89.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 89.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 89.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 89.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 89.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 88.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 88.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 88.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 87.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 87.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 87.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 86.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 86.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 86.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 86.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 86.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 85.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 85.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 84.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 84.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 83.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 81.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 81.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 80.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 80.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 80.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 80.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 80.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 79.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 79.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 79.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 79.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 78.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 78.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 78.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 78.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 78.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 78.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 77.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 77.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 77.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 77.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 76.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 76.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 76.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 75.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 75.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 74.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 74.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 73.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 73.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 72.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 72.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 72.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 72.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 71.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 71.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 71.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 70.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 70.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 70.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 70.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 70.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 70.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 69.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 69.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 68.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 68.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 68.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 67.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 67.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 67.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 66.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 65.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 65.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 65.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 64.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 64.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 64.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 63.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 63.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 62.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 62.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 62.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 62.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 61.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 61.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 61.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 61.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 61.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 60.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 59.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 59.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 59.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 59.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 58.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 58.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 57.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 57.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 57.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 57.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 56.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 56.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 56.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 55.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 55.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 54.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 53.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 52.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 52.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 52.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 52.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 51.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 51.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 51.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 50.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 50.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 50.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 49.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 49.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 49.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 49.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 48.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 47.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 46.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 45.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 44.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 44.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 44.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 44.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 43.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 42.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 41.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 39.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 37.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 37.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 37.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 35.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 35.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 32.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 31.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 30.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 28.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 24.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 21.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 16.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

186.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 151.6
FF:10164-103B2 76 years, female 151.6
Nucleus accumbens
Scaled Tags Per Million: 128.8
FF:10037-101F1 23-56 years, mixed 128.8
Putamen
Scaled Tags Per Million: 186.3
FF:10176-103C5 60 years, female 186.3
Globus pallidus
Scaled Tags Per Million: 133.3
FF:10161-103A8 76 years, female 138.7
FF:10175-103C4 60 years, female 127.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.4
Pig sample Sample description nTPM
Caudate
nTPM: 96.7
Samples: 4

Max nTPM: 118.2
Min nTPM: 77.5
Sample A Female 77.5
Sample B Female 101.2
Sample C Male 118.2
Sample D Male 89.8
Putamen
nTPM: 98.2
Samples: 4

Max nTPM: 111.5
Min nTPM: 79.8
Sample A Female 111.5
Sample B Female 79.8
Sample C Male 94.9
Sample D Male 106.5
Septum
nTPM: 87.0
Samples: 4

Max nTPM: 105.6
Min nTPM: 60.7
Sample A Female 96.9
Sample B Female 84.7
Sample C Male 105.6
Sample D Male 60.7
Ventral pallidum
nTPM: 101.4
Samples: 4

Max nTPM: 161.1
Min nTPM: 74.8
Sample A Female 86.3
Sample B Female 74.8
Sample C Male 161.1
Sample D Male 83.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 72.6
Samples: 4

Max nTPM: 81.0
Min nTPM: 67.7
Sample A Male 68.6
Sample B Male 81.0
Sample C Female 67.7
Sample D Female 72.9
Septum
nTPM: 98.5
Samples: 4

Max nTPM: 102.8
Min nTPM: 94.8
Sample A Male 102.8
Sample B Male 101.2
Sample C Female 95.1
Sample D Female 94.8
Ventral forebrain
nTPM: 79.5
Samples: 4

Max nTPM: 83.3
Min nTPM: 76.3
Sample A Male 78.2
Sample B Male 83.3
Sample C Female 80.0
Sample D Female 76.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.1
68845287 Antisense, RP_050224_01_E03, Mouse strain C57BL/6J (56 days, male) 6.9
71358662 Antisense, RP_050725_03_F12, Mouse strain C57BL/6J (56 days, male) 5.3
Pallidum
Expression energy: 6.6
71358662 Antisense, RP_050725_03_F12, Mouse strain C57BL/6J (56 days, male) 6.7
68845287 Antisense, RP_050224_01_E03, Mouse strain C57BL/6J (56 days, male) 6.4

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