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  • ATP1A1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:203.3 nTPM
HPA Brain:263.8 nTPM
GTEx:203.3 nTPM
FANTOM5:363.3 Scaled Tags Per Million
Pig:377.2 nTPM
Mouse:343.5 nTPM
Allen mouse:16.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB018702Antibody CAB069993
Glial cells LowNot detected
Neuronal cells Not detectedLow




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

263.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 230.9
2846 Female, age 79, unknown 307.4
1781 Male, age 74, unknown 276.5
1857 Female, age 85, left hemisphere 260.4
2290 Female, age 72, unknown 248.2
1854 Male, age 80, left hemisphere 235.3
2288 Male, age 75, left hemisphere 218.4
2289 Male, age 61, right hemisphere 161.0
2481 Female, age 94, left hemisphere 140.5
Globus pallidus, externus
nTPM: 137.7
2395 Male, age 75, both hemispheres 230.3
2772 Female, age 79, unknown 161.7
1996 Male, age 80, right hemisphere 120.7
2567 Female, age 72, unknown 92.2
2646 Male, age 61, right hemisphere 83.7
Globus pallidus, internus
nTPM: 140.1
2287 Male, age 75, right hemisphere 229.6
2778 Female, age 91, both hemispheres 169.8
2483 Female, age 94, right hemisphere 124.9
2111 Female, age 85, right hemisphere 122.3
2037 Male, age 80, right hemisphere 116.5
1818 Male, age 74, unknown 111.7
2566 Female, age 72, unknown 105.9
Nucleus accumbens
nTPM: 263.8
1856 Female, age 91, right hemisphere 459.3
1783 Male, age 74, unknown 310.9
2824 Male, age 61, right hemisphere 298.8
1806 Female, age 85, left hemisphere 268.1
2698 Female, age 72, unknown 252.4
2286 Male, age 75, left hemisphere 213.7
2391 Female, age 94, left hemisphere 154.5
2732 Male, age 80, right hemisphere 152.8
Nucleus basalis of Meynert
nTPM: 176.8
2393 Male, age 80, right hemisphere 212.4
2484 Female, age 94, left hemisphere 211.2
2821 Male, age 75, both hemispheres 206.1
2569 Male, age 61, both hemispheres 77.5
Nucleus of the diagonal band
nTPM: 259.9
1812 Female, age 91, both hemispheres 330.5
2775 Male, age 80, right hemisphere 299.1
2029 Male, age 61, right hemisphere 288.8
2195 Female, age 85, both hemispheres 238.6
1979 Male, age 74, unknown 142.7
Putamen
nTPM: 246.5
2466 Female, age 79, unknown 340.0
1937 Female, age 91, right hemisphere 319.9
1838 Male, age 80, right hemisphere 306.1
1829 Male, age 74, unknown 272.2
2482 Female, age 94, left hemisphere 173.5
2489 Female, age 72, unknown 167.9
2647 Male, age 75, left hemisphere 146.1
Septal nuclei
nTPM: 220.2
2031 Female, age 72, unknown 332.7
1960 Male, age 74, unknown 285.7
2629 Female, age 94, right hemisphere 261.2
2009 Female, age 91, both hemispheres 254.1
2059 Female, age 85, both hemispheres 154.2
2394 Male, age 61, left hemisphere 131.2
2199 Male, age 80, right hemisphere 122.5
Stria terminalis, bed nucleus
nTPM: 235.9
1974 Female, age 91, both hemispheres 291.3
2486 Female, age 94, both hemispheres 276.2
2201 Male, age 74, unknown 140.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

203.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 167.9
Samples: 246

Max nTPM: 486.3
Min nTPM: 34.1
Std nTPM: 92.4
Median nTPM: 155.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 486.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 404.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 402.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 393.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 390.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 382.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 382.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 371.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 371.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 366.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 363.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 346.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 346.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 339.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 337.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 333.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 333.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 325.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 324.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 320.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 319.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 318.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 310.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 308.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 294.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 290.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 287.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 286.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 280.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 279.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 279.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 277.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 277.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 277.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 275.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 268.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 265.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 259.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 259.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 257.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 256.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 256.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 255.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 255.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 254.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 253.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 246.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 245.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 244.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 240.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 239.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 238.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 235.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 235.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 234.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 233.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 232.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 232.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 231.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 231.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 230.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 230.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 229.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 228.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 227.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 227.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 225.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 224.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 224.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 221.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 221.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 218.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 217.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 216.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 216.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 210.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 210.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 209.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 208.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 208.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 205.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 205.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 205.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 204.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 200.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 200.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 199.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 197.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 195.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 193.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 192.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 190.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 190.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 189.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 187.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 186.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 185.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 184.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 183.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 180.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 180.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 180.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 180.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 179.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 179.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 178.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 175.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 171.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 170.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 170.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 168.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 167.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 167.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 167.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 166.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 165.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 163.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 162.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 162.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 158.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 157.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 157.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 156.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 154.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 153.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 151.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 149.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 148.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 147.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 145.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 143.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 143.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 141.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 140.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 137.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 136.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 135.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 135.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 134.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 131.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 130.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 130.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 127.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 126.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 125.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 125.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 125.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 120.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 119.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 119.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 118.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 115.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 115.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 115.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 112.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 112.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 112.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 111.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 111.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 111.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 111.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 111.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 109.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 106.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 105.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 104.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 103.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 103.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 100.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 100.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 99.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 98.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 98.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 95.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 95.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 94.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 93.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 92.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 92.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 92.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 91.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 89.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 89.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 85.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 85.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 84.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 84.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 84.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 83.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 82.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 82.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 82.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 82.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 82.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 80.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 79.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 79.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 79.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 79.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 78.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 78.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 77.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 77.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 77.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 77.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 75.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 74.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 74.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 72.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 71.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 70.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 70.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 69.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 69.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 68.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 67.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 66.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 66.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 66.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 65.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 65.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 63.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 62.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 61.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 61.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 60.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 59.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 59.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 58.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 57.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 57.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 55.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 54.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 54.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 50.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 49.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 49.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 49.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 44.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 43.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 42.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 41.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 41.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 40.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 34.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 34.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 203.3
Samples: 246

Max nTPM: 438.3
Min nTPM: 17.7
Std nTPM: 104.5
Median nTPM: 193.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 438.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 434.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 420.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 418.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 412.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 410.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 407.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 407.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 401.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 394.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 390.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 384.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 382.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 380.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 379.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 371.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 371.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 369.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 366.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 362.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 359.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 354.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 350.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 349.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 347.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 346.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 344.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 342.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 340.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 340.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 336.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 335.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 334.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 332.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 331.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 330.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 322.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 322.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 319.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 317.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 317.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 317.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 316.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 315.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 313.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 312.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 312.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 310.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 304.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 303.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 301.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 298.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 293.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 291.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 290.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 290.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 289.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 288.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 285.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 285.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 280.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 278.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 278.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 276.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 276.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 275.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 274.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 273.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 272.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 272.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 271.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 269.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 269.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 269.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 267.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 266.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 265.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 263.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 259.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 258.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 258.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 256.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 256.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 254.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 252.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 248.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 247.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 247.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 247.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 243.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 242.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 242.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 241.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 240.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 239.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 237.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 236.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 235.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 234.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 234.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 234.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 233.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 231.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 229.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 227.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 227.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 225.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 224.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 222.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 222.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 220.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 217.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 216.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 215.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 215.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 213.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 212.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 208.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 204.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 201.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 200.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 194.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 193.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 193.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 191.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 190.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 190.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 186.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 183.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 183.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 182.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 181.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 176.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 176.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 175.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 175.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 175.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 171.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 170.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 168.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 167.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 167.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 166.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 164.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 163.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 163.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 162.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 162.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 162.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 161.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 161.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 159.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 156.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 155.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 152.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 152.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 150.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 149.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 148.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 146.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 144.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 144.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 144.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 143.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 142.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 141.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 140.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 136.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 135.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 132.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 130.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 130.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 129.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 128.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 127.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 123.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 123.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 122.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 121.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 119.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 119.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 118.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 117.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 117.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 116.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 112.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 112.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 112.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 109.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 107.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 105.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 103.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 103.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 100.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 97.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 96.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 95.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 94.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 94.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 93.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 93.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 91.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 89.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 86.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 86.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 85.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 83.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 81.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 81.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 80.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 80.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 79.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 78.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 78.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 77.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 74.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 74.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 72.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 72.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 72.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 71.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 70.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 70.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 69.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 67.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 67.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 66.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 65.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 60.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 54.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 52.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 52.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 49.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 49.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 48.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 48.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 47.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 45.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 43.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 41.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 39.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 38.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 36.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 36.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 31.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 17.7
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Brain - Putamen (basal ganglia)
Average nTPM: 167.7
Samples: 205

Max nTPM: 457.6
Min nTPM: 35.8
Std nTPM: 89.6
Median nTPM: 141.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 457.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 416.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 407.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 399.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 374.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 373.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 354.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 332.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 325.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 323.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 312.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 312.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 311.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 310.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 310.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 308.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 308.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 306.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 304.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 304.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 303.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 300.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 297.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 295.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 292.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 292.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 289.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 289.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 289.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 288.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 285.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 284.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 282.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 277.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 276.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 270.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 269.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 269.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 267.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 265.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 249.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 247.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 246.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 240.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 239.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 239.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 238.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 234.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 233.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 232.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 231.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 229.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 229.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 229.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 227.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 225.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 214.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 213.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 211.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 207.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 203.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 202.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 202.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 201.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 201.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 200.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 200.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 199.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 198.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 195.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 194.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 194.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 193.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 192.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 192.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 190.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 188.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 184.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 179.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 179.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 176.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 176.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 171.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 169.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 168.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 167.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 165.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 165.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 164.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 163.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 162.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 158.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 157.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 157.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 151.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 151.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 150.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 149.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 148.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 148.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 145.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 144.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 141.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 139.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 138.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 138.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 138.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 137.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 136.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 134.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 132.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 132.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 131.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 131.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 129.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 127.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 127.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 126.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 126.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 126.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 124.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 123.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 123.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 122.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 121.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 120.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 118.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 118.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 117.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 117.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 116.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 116.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 114.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 113.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 112.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 112.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 112.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 111.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 108.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 107.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 107.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 105.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 104.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 104.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 104.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 103.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 101.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 99.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 99.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 98.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 96.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 95.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 95.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 94.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 93.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 93.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 92.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 90.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 90.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 90.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 88.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 88.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 86.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 86.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 85.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 85.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 84.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 83.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 83.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 81.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 81.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 80.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 80.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 80.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 80.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 79.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 78.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 78.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 76.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 76.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 74.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 74.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 73.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 72.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 72.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 68.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 67.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 65.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 64.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 63.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 62.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 61.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 59.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 58.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 58.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 56.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 54.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 54.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 53.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 47.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 46.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 46.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 40.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 39.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 35.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

363.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 336.7
FF:10164-103B2 76 years, female 336.7
Nucleus accumbens
Scaled Tags Per Million: 290.7
FF:10037-101F1 23-56 years, mixed 290.7
Putamen
Scaled Tags Per Million: 363.3
FF:10176-103C5 60 years, female 363.3
Globus pallidus
Scaled Tags Per Million: 126.6
FF:10175-103C4 60 years, female 132.6
FF:10161-103A8 76 years, female 120.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

377.2
Pig sample Sample description nTPM
Caudate
nTPM: 360.0
Samples: 4

Max nTPM: 453.9
Min nTPM: 276.3
Sample A Female 276.3
Sample B Female 341.4
Sample C Male 453.9
Sample D Male 368.3
Putamen
nTPM: 377.2
Samples: 4

Max nTPM: 554.9
Min nTPM: 205.6
Sample A Female 205.6
Sample B Female 331.4
Sample C Male 554.9
Sample D Male 416.7
Septum
nTPM: 214.5
Samples: 4

Max nTPM: 258.6
Min nTPM: 167.8
Sample A Female 253.6
Sample B Female 258.6
Sample C Male 177.9
Sample D Male 167.8
Ventral pallidum
nTPM: 284.1
Samples: 4

Max nTPM: 329.9
Min nTPM: 238.6
Sample A Female 309.8
Sample B Female 329.9
Sample C Male 238.6
Sample D Male 258.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

343.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 309.2
Samples: 4

Max nTPM: 324.5
Min nTPM: 293.9
Sample A Male 324.5
Sample B Male 315.4
Sample C Female 293.9
Sample D Female 303.1
Septum
nTPM: 222.7
Samples: 4

Max nTPM: 243.8
Min nTPM: 202.2
Sample A Male 243.8
Sample B Male 216.8
Sample C Female 227.9
Sample D Female 202.2
Ventral forebrain
nTPM: 343.5
Samples: 4

Max nTPM: 351.4
Min nTPM: 326.5
Sample A Male 351.4
Sample B Male 347.0
Sample C Female 326.5
Sample D Female 349.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 16.7
71836844 Antisense, RP_051017_02_C07, Mouse strain C57BL/6J (56 days, male) 19.6
100055045 Antisense, RP_080110_01_A05, Mouse strain C57BL/6J (56 days, male) 16.4
100055054 Antisense, RP_080110_01_A05, Mouse strain C57BL/6J (56 days, male) 15.0
68157413 Antisense, RP_041116_02_F06, Mouse strain C57BL/6J (56 days, male) 14.1
100055069 Antisense, RP_080110_01_A05, Mouse strain C57BL/6J (56 days, male) 14.1
Pallidum
Expression energy: 12.1
100055045 Antisense, RP_080110_01_A05, Mouse strain C57BL/6J (56 days, male) 14.0
71836844 Antisense, RP_051017_02_C07, Mouse strain C57BL/6J (56 days, male) 13.2
100055069 Antisense, RP_080110_01_A05, Mouse strain C57BL/6J (56 days, male) 12.9
100055054 Antisense, RP_080110_01_A05, Mouse strain C57BL/6J (56 days, male) 12.8
68157413 Antisense, RP_041116_02_F06, Mouse strain C57BL/6J (56 days, male) 9.0

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