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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Mouse brain, Intensity
Medulla oblongatai

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

74.870
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:191.4 nTPM
FANTOM5:55.6 Scaled Tags Per Million

MEDULLA OBLONGATA - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA059328
Medulla oblongata mean intensity 74.870
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Nucleus of the solitary tract 39.752
Raphe magnus nucleus 10.976
Cochlear nucleus 61.331
Lateral paragigantocellular nucleus 52.879
Raphe pallidus nucleus 16.680
Facial nucleus 40.003
Hypoglossal nucleus 64.600
Ambiguus nucleus 61.191
External cuneate nucleus 74.870
Inferior olivary nucleus 19.407
Raphe obscures nucleus 33.916
Dorsal motor nucleus of vagus 61.690

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

191.4
Sample id Sample description nTPM
Area postrema
nTPM: 55.7
2054 Male, age 76, both hemispheres 97.2
2799 Male, age 61, both hemispheres 45.5
2306 Male, age 80, both hemispheres 24.4
Dorsal medullary reticular nucleus
nTPM: 116.9
2040 Female, age 85, both hemispheres 168.9
2373 Male, age 61, both hemispheres 91.6
2088 Male, age 76, both hemispheres 90.3
Dorsal motor vagal complex
nTPM: 82.8
2133 Female, age 91, both hemispheres 144.3
2000 Male, age 74, unknown 136.3
2813 Female, age 72, unknown 99.0
2844 Male, age 55, unknown 72.6
2185 Male, age 76, both hemispheres 64.2
2807 Female, age 85, both hemispheres 52.1
2643 Male, age 74, both hemispheres 47.3
2797 Male, age 61, both hemispheres 46.4
Gigantocellular reticular nuclei, medullary
nTPM: 127.2
2462 Male, age 74, both hemispheres 255.6
1876 Female, age 85, both hemispheres 122.0
2310 Male, age 80, both hemispheres 115.7
2387 Female, age 91, both hemispheres 102.9
2022 Male, age 76, right hemisphere 99.0
2314 Male, age 61, both hemispheres 68.0
Gigantocellular reticular nuclei, pars
nTPM: 153.6
2168 Male, age 76, both hemispheres 275.2
2084 Female, age 85, both hemispheres 152.0
2336 Male, age 61, both hemispheres 124.6
2706 Male, age 80, both hemispheres 109.1
2330 Male, age 80, both hemispheres 107.2
Inferior olive
nTPM: 63.8
2085 Female, age 85, both hemispheres 102.1
2628 Female, age 91, both hemispheres 70.5
2178 Male, age 61, both hemispheres 54.7
2379 Male, age 80, both hemispheres 48.7
2563 Male, age 74, both hemispheres 43.1
Lateral medullary reticular nucleus
nTPM: 113.9
2044 Male, age 76, both hemispheres 241.0
2305 Male, age 74, both hemispheres 103.2
2374 Male, age 61, both hemispheres 102.6
2190 Female, age 85, both hemispheres 93.2
2804 Female, age 91, both hemispheres 85.7
2852 Male, age 80, both hemispheres 57.4
Medial olivary nucleus
nTPM: 53.5
2851 Male, age 80, both hemispheres 80.1
1962 Male, age 76, both hemispheres 71.8
1943 Male, age 61, both hemispheres 32.8
2138 Female, age 91, both hemispheres 29.1
Medial vestibular nucleus
nTPM: 153.3
2743 Female, age 85, both hemispheres 200.3
2134 Male, age 76, both hemispheres 195.4
2801 Male, age 74, both hemispheres 144.4
2624 Male, age 61, both hemispheres 136.8
2803 Female, age 91, both hemispheres 128.6
2093 Male, age 80, both hemispheres 114.2
Motor hypoglossal nucleus
nTPM: 126.1
2125 Female, age 91, both hemispheres 173.3
2132 Female, age 85, both hemispheres 141.2
2461 Male, age 61, both hemispheres 134.8
2277 Male, age 76, both hemispheres 99.2
2182 Male, age 80, both hemispheres 81.9
Nucleus ambiguus
nTPM: 102.8
2096 Female, age 85, both hemispheres 129.2
2071 Male, age 76, both hemispheres 76.3
Nucleus cuneatus
nTPM: 82.3
2131 Male, age 76, both hemispheres 186.3
2100 Male, age 76, both hemispheres 110.4
2376 Male, age 61, both hemispheres 108.8
2564 Male, age 74, both hemispheres 81.6
2562 Male, age 61, both hemispheres 78.9
2381 Male, age 80, both hemispheres 54.9
2808 Female, age 85, both hemispheres 50.0
2380 Male, age 80, both hemispheres 35.2
2805 Female, age 91, both hemispheres 34.7
Nucleus gracilis
nTPM: 41.9
2627 Male, age 74, both hemispheres 68.5
2382 Male, age 80, both hemispheres 30.6
2299 Female, age 85, both hemispheres 26.6
Nucleus raphe obscurus
nTPM: 89.2
2800 Male, age 61, midline 128.1
2845 Female, age 85, midline 96.6
2142 Male, age 76, midline 43.0
Nucleus raphe pallidus
nTPM: 97.7
2183 Male, age 80, midline 137.3
1924 Male, age 61, midline 108.9
2145 Male, age 76, midline 47.0
Nucleus tractus solitarii
nTPM: 105.1
2144 Female, age 91, right hemisphere 199.0
2656 Male, age 76, both hemispheres 98.4
2191 Female, age 85, both hemispheres 68.0
2307 Male, age 80, both hemispheres 54.8
Parvicellular reticular nuclei
nTPM: 166.5
2558 Male, age 74, both hemispheres 213.1
2095 Male, age 76, both hemispheres 164.9
2119 Male, age 80, both hemispheres 121.5
Parvicellular reticular nuclei, medullary
nTPM: 130.0
2091 Female, age 85, both hemispheres 155.4
2189 Female, age 91, both hemispheres 146.3
2181 Male, age 80, left hemisphere 88.4
Peritrigeminal nucleus
nTPM: 178.3
2136 Male, age 76, both hemispheres 204.6
2179 Male, age 61, both hemispheres 179.3
2067 Female, age 85, both hemispheres 151.0
Prepositus hypoglossal nucleus
nTPM: 138.9
2855 Female, age 85, right hemisphere 142.4
2086 Male, age 80, both hemispheres 135.4
Spinal trigeminal nucleus, caudal
nTPM: 121.7
2390 Female, age 91, both hemispheres 213.2
2447 Male, age 76, both hemispheres 144.6
2642 Male, age 74, both hemispheres 94.1
2312 Male, age 61, both hemispheres 83.7
2308 Male, age 80, both hemispheres 73.0
Spinal trigeminal nucleus, interpolar
nTPM: 191.4
2066 Male, age 76, right hemisphere 305.8
2625 Male, age 61, both hemispheres 242.7
2389 Female, age 91, both hemispheres 165.7
2386 Female, age 85, both hemispheres 123.7
2033 Male, age 80, both hemispheres 119.2
Spinal vestibular nucleus
nTPM: 112.8
2186 Female, age 91, both hemispheres 142.1
2806 Female, age 85, both hemispheres 126.3
2748 Male, age 76, both hemispheres 125.6
2780 Male, age 80, both hemispheres 112.4
2796 Male, age 61, both hemispheres 111.5
2384 Male, age 74, both hemispheres 58.5
Superior vestibular nucleus
nTPM: 94.0
2061 Male, age 76, both hemispheres 114.1
2015 Male, age 80, both hemispheres 100.2
2383 Male, age 74, both hemispheres 67.7
Ventral medullary reticular nucleus
nTPM: 100.1
2060 Male, age 76, both hemispheres 101.9
2372 Male, age 61, both hemispheres 98.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 143.9
1986 Male, age 76, both hemispheres 219.4
2741 Female, age 85, both hemispheres 194.7
2180 Male, age 61, both hemispheres 122.0
2302 Female, age 91, both hemispheres 107.3
2118 Male, age 80, both hemispheres 76.0

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

55.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 55.6
FF:10038-101F2 18-64 years, mixed 81.1
FF:10155-103A2 76 years, female 44.9
FF:10174-103C3 60 years, female 40.9

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