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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1085.3 nTPM
HPA Brain:105.7 nTPM
GTEx:1085.3 nTPM
FANTOM5:32.2 Scaled Tags Per Million
Pig:22.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003372
Glial cells Low
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 73.4
1857 Female, age 85, left hemisphere 92.9
2846 Female, age 79, unknown 80.9
2481 Female, age 94, left hemisphere 78.6
1781 Male, age 74, unknown 76.3
2290 Female, age 72, unknown 71.5
1854 Male, age 80, left hemisphere 71.0
2288 Male, age 75, left hemisphere 64.5
2289 Male, age 61, right hemisphere 51.7
Globus pallidus, externus
nTPM: 105.7
1996 Male, age 80, right hemisphere 126.8
2395 Male, age 75, both hemispheres 120.9
2772 Female, age 79, unknown 117.6
2567 Female, age 72, unknown 90.3
2646 Male, age 61, right hemisphere 72.7
Globus pallidus, internus
nTPM: 102.7
2483 Female, age 94, right hemisphere 127.5
2287 Male, age 75, right hemisphere 126.8
2037 Male, age 80, right hemisphere 117.9
2778 Female, age 91, both hemispheres 101.9
1818 Male, age 74, unknown 84.9
2111 Female, age 85, right hemisphere 79.9
2566 Female, age 72, unknown 79.8
Nucleus accumbens
nTPM: 86.4
2732 Male, age 80, right hemisphere 97.7
1806 Female, age 85, left hemisphere 97.3
1856 Female, age 91, right hemisphere 95.2
1783 Male, age 74, unknown 93.4
2391 Female, age 94, left hemisphere 87.0
2286 Male, age 75, left hemisphere 77.2
2824 Male, age 61, right hemisphere 74.3
2698 Female, age 72, unknown 68.7
Nucleus basalis of Meynert
nTPM: 88.9
2393 Male, age 80, right hemisphere 103.7
2821 Male, age 75, both hemispheres 87.8
2484 Female, age 94, left hemisphere 85.9
2569 Male, age 61, both hemispheres 78.4
Nucleus of the diagonal band
nTPM: 71.4
1812 Female, age 91, both hemispheres 85.6
2775 Male, age 80, right hemisphere 82.8
1979 Male, age 74, unknown 70.9
2195 Female, age 85, both hemispheres 59.7
2029 Male, age 61, right hemisphere 58.1
Putamen
nTPM: 70.6
2466 Female, age 79, unknown 87.3
1937 Female, age 91, right hemisphere 81.8
2482 Female, age 94, left hemisphere 77.5
2647 Male, age 75, left hemisphere 71.6
1829 Male, age 74, unknown 64.1
1838 Male, age 80, right hemisphere 57.5
2489 Female, age 72, unknown 54.6
Septal nuclei
nTPM: 69.7
2031 Female, age 72, unknown 83.8
1960 Male, age 74, unknown 74.0
2009 Female, age 91, both hemispheres 69.6
2394 Male, age 61, left hemisphere 68.4
2199 Male, age 80, right hemisphere 68.1
2059 Female, age 85, both hemispheres 67.0
2629 Female, age 94, right hemisphere 57.3
Stria terminalis, bed nucleus
nTPM: 59.3
1974 Female, age 91, both hemispheres 78.4
2201 Male, age 74, unknown 51.1
2486 Female, age 94, both hemispheres 48.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1085.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 833.6
Samples: 246

Max nTPM: 2427.2
Min nTPM: 407.5
Std nTPM: 302.0
Median nTPM: 762.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2427.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 2045.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1949.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1836.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1649.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1640.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1573.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1573.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1552.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1538.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1532.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1487.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1482.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1475.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1423.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1386.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1319.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1303.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1248.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1239.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1228.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1222.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1216.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1212.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1204.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1189.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1183.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1166.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1149.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1142.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 1129.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1119.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1109.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1108.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1106.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1102.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1100.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1090.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1076.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1074.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1070.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1045.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1045.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1032.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1026.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1020.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1016.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1012.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1006.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1004.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 998.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 995.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 994.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 994.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 984.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 976.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 975.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 970.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 970.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 968.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 963.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 954.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 953.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 952.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 939.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 935.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 934.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 933.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 928.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 927.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 927.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 924.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 918.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 916.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 911.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 911.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 905.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 900.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 900.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 898.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 898.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 893.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 893.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 892.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 891.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 881.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 878.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 875.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 872.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 871.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 865.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 861.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 858.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 856.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 855.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 855.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 854.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 851.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 841.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 839.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 836.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 829.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 828.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 824.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 820.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 816.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 815.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 811.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 809.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 800.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 799.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 796.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 792.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 792.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 785.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 784.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 770.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 770.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 770.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 767.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 766.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 765.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 763.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 762.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 758.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 757.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 756.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 754.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 754.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 754.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 750.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 749.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 749.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 747.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 742.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 739.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 739.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 737.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 730.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 723.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 720.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 719.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 718.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 717.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 716.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 713.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 709.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 709.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 707.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 705.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 705.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 695.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 689.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 688.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 684.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 684.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 683.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 681.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 679.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 679.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 678.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 677.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 676.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 676.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 669.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 667.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 667.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 665.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 661.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 654.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 652.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 649.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 649.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 644.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 642.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 642.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 641.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 640.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 640.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 638.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 635.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 632.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 627.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 625.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 624.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 623.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 619.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 619.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 619.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 617.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 615.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 611.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 610.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 608.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 607.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 605.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 603.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 602.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 599.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 592.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 590.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 585.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 583.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 580.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 580.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 579.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 577.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 576.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 576.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 567.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 567.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 565.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 565.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 563.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 555.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 555.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 553.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 551.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 540.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 537.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 536.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 532.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 531.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 523.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 519.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 517.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 512.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 511.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 509.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 504.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 502.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 500.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 490.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 490.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 475.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 463.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 462.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 460.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 459.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 455.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 450.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 448.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 447.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 443.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 432.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 407.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 1085.3
Samples: 246

Max nTPM: 4903.0
Min nTPM: 423.8
Std nTPM: 475.2
Median nTPM: 996.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 4903.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 3577.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 2679.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 2673.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 2555.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 2412.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 2268.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 2238.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 2141.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2026.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 2004.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1790.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 1763.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1727.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 1684.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 1682.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1680.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1650.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1629.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 1603.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1527.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1521.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 1510.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1497.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1495.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1488.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1474.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1472.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 1439.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1437.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1426.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 1424.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1421.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 1413.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 1412.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1385.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1385.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 1385.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1382.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 1372.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1369.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1367.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1366.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 1366.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1356.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 1347.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1345.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 1340.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1338.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1308.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1301.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 1300.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1293.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1289.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1267.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 1267.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1267.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1267.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1266.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 1264.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1258.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1251.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 1243.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1239.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1233.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 1223.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 1213.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 1209.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1192.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 1188.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 1187.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 1186.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 1183.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 1179.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 1166.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1161.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1157.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 1156.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1148.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 1147.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 1141.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 1137.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1137.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1134.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 1129.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1127.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 1123.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 1120.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1119.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1109.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 1109.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 1107.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1106.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1097.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 1091.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 1089.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 1088.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 1081.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 1080.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 1073.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1070.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1061.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 1060.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1057.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 1056.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1055.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1050.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 1049.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 1048.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 1047.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1040.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 1040.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 1034.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 1029.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 1028.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1026.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 1010.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1005.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 1003.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1000.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 998.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 997.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 996.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 995.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 991.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 991.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 991.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 988.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 982.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 982.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 979.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 979.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 975.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 973.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 968.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 968.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 962.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 959.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 953.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 951.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 944.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 942.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 936.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 931.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 918.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 917.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 911.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 910.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 909.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 909.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 908.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 904.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 901.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 900.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 895.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 890.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 890.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 886.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 883.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 880.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 879.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 870.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 870.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 868.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 864.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 863.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 859.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 858.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 854.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 853.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 851.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 845.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 845.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 841.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 840.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 839.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 834.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 834.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 827.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 824.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 818.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 815.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 815.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 812.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 810.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 808.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 798.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 789.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 779.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 778.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 777.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 773.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 770.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 768.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 759.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 756.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 751.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 748.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 747.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 746.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 736.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 735.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 730.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 730.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 726.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 715.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 714.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 713.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 710.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 707.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 705.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 704.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 702.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 701.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 698.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 696.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 692.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 684.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 683.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 671.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 670.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 668.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 666.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 665.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 661.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 655.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 645.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 643.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 640.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 638.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 634.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 631.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 623.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 608.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 606.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 604.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 590.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 587.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 570.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 564.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 563.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 563.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 528.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 526.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 460.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 423.8
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Brain - Putamen (basal ganglia)
Average nTPM: 906.1
Samples: 205

Max nTPM: 2720.7
Min nTPM: 387.6
Std nTPM: 316.9
Median nTPM: 830.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2720.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1913.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1897.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1632.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1621.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1611.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1599.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1587.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1572.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1538.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1479.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1479.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1470.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1463.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1435.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1423.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1366.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1361.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1340.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1334.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1331.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1329.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1323.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1308.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1307.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1298.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1292.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1281.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1275.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1259.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1229.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1220.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1208.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1199.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1187.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1179.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1156.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 1156.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1141.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1140.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1121.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1114.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1105.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1104.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1092.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1091.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1079.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1077.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1077.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 1047.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1040.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1025.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1024.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1023.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1022.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1008.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 987.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 982.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 981.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 977.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 975.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 969.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 968.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 965.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 961.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 959.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 957.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 955.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 951.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 947.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 946.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 945.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 939.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 938.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 934.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 934.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 928.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 922.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 919.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 916.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 915.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 915.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 909.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 908.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 906.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 904.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 900.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 897.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 894.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 873.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 872.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 871.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 871.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 870.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 864.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 862.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 857.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 850.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 850.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 848.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 844.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 835.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 830.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 829.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 825.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 822.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 816.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 814.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 806.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 805.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 799.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 795.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 794.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 794.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 792.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 789.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 788.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 787.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 786.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 784.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 783.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 782.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 780.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 774.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 773.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 771.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 771.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 767.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 766.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 761.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 760.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 755.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 746.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 742.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 741.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 735.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 733.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 733.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 733.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 728.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 727.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 725.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 721.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 721.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 718.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 718.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 718.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 716.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 713.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 711.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 706.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 703.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 703.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 701.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 697.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 692.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 692.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 687.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 687.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 687.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 687.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 687.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 677.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 675.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 672.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 671.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 668.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 668.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 665.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 663.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 655.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 654.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 647.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 632.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 623.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 622.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 611.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 603.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 603.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 602.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 602.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 595.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 591.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 589.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 588.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 560.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 560.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 553.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 540.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 539.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 532.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 531.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 529.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 526.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 519.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 518.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 507.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 499.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 481.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 481.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 475.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 464.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 460.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 446.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 387.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

32.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 24.7
FF:10164-103B2 76 years, female 24.7
Nucleus accumbens
Scaled Tags Per Million: 29.8
FF:10037-101F1 23-56 years, mixed 29.8
Putamen
Scaled Tags Per Million: 32.2
FF:10176-103C5 60 years, female 32.2
Globus pallidus
Scaled Tags Per Million: 23.3
FF:10175-103C4 60 years, female 30.6
FF:10161-103A8 76 years, female 16.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.9
Pig sample Sample description nTPM
Caudate
nTPM: 18.9
Samples: 4

Max nTPM: 20.7
Min nTPM: 17.2
Sample A Female 20.7
Sample B Female 17.2
Sample C Male 19.4
Sample D Male 18.1
Putamen
nTPM: 22.9
Samples: 4

Max nTPM: 26.6
Min nTPM: 18.8
Sample A Female 26.6
Sample B Female 18.8
Sample C Male 25.0
Sample D Male 21.2
Septum
nTPM: 22.7
Samples: 4

Max nTPM: 27.9
Min nTPM: 18.0
Sample A Female 27.9
Sample B Female 22.3
Sample C Male 22.6
Sample D Male 18.0
Ventral pallidum
nTPM: 21.6
Samples: 4

Max nTPM: 24.3
Min nTPM: 18.2
Sample A Female 24.3
Sample B Female 21.5
Sample C Male 18.2
Sample D Male 22.4

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