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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:779.3 nTPM
HPA Brain:421.3 nTPM
GTEx:779.3 nTPM
FANTOM5:32.4 Scaled Tags Per Million
Pig:619.2 nTPM
Mouse:1607.8 nTPM
Allen mouse:8.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018504
Glial cells Medium
Neuronal cells Medium


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

421.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 348.0
2846 Female, age 79, unknown 431.8
1857 Female, age 85, left hemisphere 373.5
2290 Female, age 72, unknown 366.8
1781 Male, age 74, unknown 366.7
1854 Male, age 80, left hemisphere 351.0
2481 Female, age 94, left hemisphere 335.2
2288 Male, age 75, left hemisphere 294.3
2289 Male, age 61, right hemisphere 264.4
Globus pallidus, externus
nTPM: 420.6
1996 Male, age 80, right hemisphere 530.1
2772 Female, age 79, unknown 499.8
2395 Male, age 75, both hemispheres 419.7
2567 Female, age 72, unknown 333.4
2646 Male, age 61, right hemisphere 319.8
Globus pallidus, internus
nTPM: 421.3
2287 Male, age 75, right hemisphere 506.9
2483 Female, age 94, right hemisphere 486.8
2037 Male, age 80, right hemisphere 485.1
2778 Female, age 91, both hemispheres 407.1
1818 Male, age 74, unknown 394.8
2566 Female, age 72, unknown 341.4
2111 Female, age 85, right hemisphere 326.7
Nucleus accumbens
nTPM: 352.6
2698 Female, age 72, unknown 393.5
1806 Female, age 85, left hemisphere 385.4
1783 Male, age 74, unknown 383.1
1856 Female, age 91, right hemisphere 380.9
2391 Female, age 94, left hemisphere 359.8
2732 Male, age 80, right hemisphere 331.5
2286 Male, age 75, left hemisphere 314.2
2824 Male, age 61, right hemisphere 272.2
Nucleus basalis of Meynert
nTPM: 352.9
2821 Male, age 75, both hemispheres 375.2
2569 Male, age 61, both hemispheres 372.7
2484 Female, age 94, left hemisphere 364.5
2393 Male, age 80, right hemisphere 299.1
Nucleus of the diagonal band
nTPM: 313.7
1812 Female, age 91, both hemispheres 368.2
2775 Male, age 80, right hemisphere 319.9
1979 Male, age 74, unknown 304.7
2195 Female, age 85, both hemispheres 293.8
2029 Male, age 61, right hemisphere 281.9
Putamen
nTPM: 315.9
2466 Female, age 79, unknown 355.6
2482 Female, age 94, left hemisphere 351.4
1937 Female, age 91, right hemisphere 331.5
1838 Male, age 80, right hemisphere 325.8
2647 Male, age 75, left hemisphere 306.9
2489 Female, age 72, unknown 277.4
1829 Male, age 74, unknown 262.6
Septal nuclei
nTPM: 308.3
2031 Female, age 72, unknown 355.8
2199 Male, age 80, right hemisphere 320.3
1960 Male, age 74, unknown 310.1
2394 Male, age 61, left hemisphere 305.1
2009 Female, age 91, both hemispheres 300.3
2059 Female, age 85, both hemispheres 286.1
2629 Female, age 94, right hemisphere 280.3
Stria terminalis, bed nucleus
nTPM: 266.0
1974 Female, age 91, both hemispheres 324.6
2201 Male, age 74, unknown 250.1
2486 Female, age 94, both hemispheres 223.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

779.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 634.1
Samples: 246

Max nTPM: 1918.4
Min nTPM: 312.0
Std nTPM: 209.0
Median nTPM: 602.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1918.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1661.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1381.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1331.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1310.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1267.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1242.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1162.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1127.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1067.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1033.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1005.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 978.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 974.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 966.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 956.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 941.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 927.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 902.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 899.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 878.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 878.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 875.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 869.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 869.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 856.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 842.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 834.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 830.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 829.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 827.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 824.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 811.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 795.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 785.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 783.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 782.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 781.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 777.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 760.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 748.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 745.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 743.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 742.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 740.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 737.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 731.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 731.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 731.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 729.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 727.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 725.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 725.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 721.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 719.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 716.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 713.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 709.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 709.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 706.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 703.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 698.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 698.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 693.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 691.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 691.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 690.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 688.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 686.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 685.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 682.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 680.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 680.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 679.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 677.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 677.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 676.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 676.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 670.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 670.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 670.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 668.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 665.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 665.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 664.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 662.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 661.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 659.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 652.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 649.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 647.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 647.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 645.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 643.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 642.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 641.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 641.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 639.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 638.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 638.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 637.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 636.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 636.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 634.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 633.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 633.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 633.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 628.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 625.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 625.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 625.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 621.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 621.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 616.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 614.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 614.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 613.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 613.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 609.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 607.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 604.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 604.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 602.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 602.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 594.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 591.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 590.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 590.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 589.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 588.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 586.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 586.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 584.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 584.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 583.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 582.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 578.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 574.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 574.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 573.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 569.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 569.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 568.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 567.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 565.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 563.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 563.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 563.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 562.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 561.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 561.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 558.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 558.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 557.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 554.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 553.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 552.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 552.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 551.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 546.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 546.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 546.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 545.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 543.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 543.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 542.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 539.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 537.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 535.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 528.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 525.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 522.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 518.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 516.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 516.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 514.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 513.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 512.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 509.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 509.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 505.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 503.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 503.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 502.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 502.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 502.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 501.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 500.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 493.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 493.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 490.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 489.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 488.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 484.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 482.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 481.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 481.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 479.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 476.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 473.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 471.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 471.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 467.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 463.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 461.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 460.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 459.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 458.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 454.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 452.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 451.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 450.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 449.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 449.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 447.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 443.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 443.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 442.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 441.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 438.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 437.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 437.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 436.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 434.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 433.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 433.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 425.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 422.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 421.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 421.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 421.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 410.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 407.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 404.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 401.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 394.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 392.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 376.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 376.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 372.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 353.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 336.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 329.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 315.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 313.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 312.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 779.3
Samples: 246

Max nTPM: 2776.9
Min nTPM: 356.2
Std nTPM: 295.1
Median nTPM: 705.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 2776.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 2559.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1821.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1780.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1619.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1364.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1287.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1280.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1270.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1256.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1240.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1225.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1224.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1219.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1218.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 1214.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1178.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1166.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1157.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1143.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1133.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1131.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1121.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1092.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1092.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1086.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1081.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1080.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1066.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 1062.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1051.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 1043.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1031.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1028.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1028.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 1027.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1021.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1016.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1008.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 998.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 996.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 994.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 991.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 989.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 985.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 972.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 968.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 961.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 960.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 959.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 957.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 957.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 954.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 952.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 950.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 943.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 941.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 934.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 926.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 924.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 919.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 919.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 910.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 907.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 907.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 898.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 894.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 891.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 889.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 889.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 883.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 880.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 879.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 872.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 866.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 864.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 860.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 853.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 851.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 851.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 849.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 845.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 840.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 840.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 835.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 832.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 823.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 823.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 822.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 816.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 815.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 811.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 811.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 801.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 794.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 793.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 790.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 786.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 779.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 775.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 768.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 764.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 761.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 761.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 760.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 756.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 755.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 753.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 748.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 747.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 747.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 746.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 737.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 736.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 729.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 728.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 721.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 719.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 718.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 717.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 711.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 708.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 708.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 702.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 701.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 698.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 697.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 696.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 696.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 695.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 694.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 691.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 691.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 690.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 689.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 689.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 688.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 688.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 686.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 682.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 679.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 679.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 677.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 676.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 673.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 673.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 669.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 669.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 667.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 665.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 662.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 660.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 653.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 653.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 644.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 644.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 643.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 643.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 643.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 642.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 637.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 635.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 635.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 634.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 631.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 622.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 620.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 620.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 619.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 618.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 617.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 617.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 613.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 613.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 608.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 607.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 603.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 597.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 593.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 589.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 587.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 587.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 586.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 586.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 585.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 580.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 579.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 575.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 573.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 572.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 571.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 571.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 570.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 566.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 566.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 565.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 561.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 559.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 557.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 555.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 552.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 550.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 545.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 545.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 545.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 544.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 543.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 540.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 538.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 536.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 534.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 532.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 531.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 529.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 528.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 528.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 523.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 518.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 517.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 510.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 509.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 507.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 503.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 503.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 496.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 493.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 491.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 491.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 476.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 471.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 467.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 467.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 456.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 451.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 444.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 444.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 441.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 432.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 429.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 426.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 425.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 420.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 413.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 398.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 363.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 356.2
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Brain - Putamen (basal ganglia)
Average nTPM: 686.9
Samples: 205

Max nTPM: 2051.9
Min nTPM: 363.9
Std nTPM: 213.7
Median nTPM: 656.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2051.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1431.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1404.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1240.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 1196.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1188.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1121.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1067.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1054.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1052.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1050.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1044.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1025.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1019.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1019.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1011.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 990.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 987.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 968.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 966.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 964.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 960.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 954.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 954.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 950.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 945.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 932.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 922.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 919.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 905.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 898.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 861.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 859.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 853.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 844.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 844.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 842.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 833.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 829.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 823.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 809.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 800.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 791.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 790.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 786.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 785.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 783.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 782.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 781.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 766.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 761.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 760.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 756.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 755.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 755.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 753.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 753.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 748.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 746.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 745.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 739.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 738.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 734.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 731.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 727.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 718.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 718.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 715.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 713.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 711.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 710.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 709.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 708.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 707.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 706.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 705.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 703.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 703.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 695.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 694.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 694.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 694.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 692.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 689.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 687.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 686.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 684.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 683.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 680.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 678.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 676.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 672.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 670.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 669.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 669.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 668.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 666.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 664.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 663.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 663.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 660.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 656.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 656.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 655.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 653.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 652.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 652.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 651.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 646.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 645.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 644.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 638.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 637.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 637.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 636.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 635.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 633.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 629.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 626.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 626.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 622.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 622.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 617.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 617.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 616.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 610.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 599.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 598.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 594.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 593.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 590.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 590.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 587.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 586.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 584.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 584.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 583.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 581.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 580.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 570.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 569.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 569.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 565.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 564.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 563.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 562.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 558.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 556.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 555.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 553.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 553.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 553.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 550.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 548.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 546.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 543.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 542.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 539.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 539.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 537.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 530.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 530.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 529.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 516.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 514.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 512.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 507.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 506.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 506.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 503.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 497.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 492.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 489.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 487.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 483.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 482.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 482.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 480.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 480.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 478.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 477.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 475.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 474.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 472.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 465.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 464.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 458.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 454.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 451.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 448.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 446.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 445.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 445.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 442.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 440.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 429.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 417.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 413.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 413.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 402.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 401.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 389.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 385.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 378.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 363.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

32.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 25.2
FF:10164-103B2 76 years, female 25.2
Nucleus accumbens
Scaled Tags Per Million: 18.2
FF:10037-101F1 23-56 years, mixed 18.2
Putamen
Scaled Tags Per Million: 32.4
FF:10176-103C5 60 years, female 32.4
Globus pallidus
Scaled Tags Per Million: 21.4
FF:10161-103A8 76 years, female 27.2
FF:10175-103C4 60 years, female 15.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

619.2
Pig sample Sample description nTPM
Caudate
nTPM: 537.0
Samples: 4

Max nTPM: 612.4
Min nTPM: 465.5
Sample A Female 481.2
Sample B Female 588.9
Sample C Male 612.4
Sample D Male 465.5
Putamen
nTPM: 619.2
Samples: 4

Max nTPM: 730.9
Min nTPM: 453.2
Sample A Female 653.1
Sample B Female 453.2
Sample C Male 730.9
Sample D Male 639.5
Septum
nTPM: 560.6
Samples: 4

Max nTPM: 688.3
Min nTPM: 493.4
Sample A Female 688.3
Sample B Female 550.7
Sample C Male 493.4
Sample D Male 509.8
Ventral pallidum
nTPM: 542.2
Samples: 4

Max nTPM: 649.3
Min nTPM: 478.9
Sample A Female 478.9
Sample B Female 649.3
Sample C Male 481.0
Sample D Male 559.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1607.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1522.7
Samples: 4

Max nTPM: 1661.3
Min nTPM: 1413.0
Sample A Male 1413.0
Sample B Male 1533.0
Sample C Female 1483.6
Sample D Female 1661.3
Septum
nTPM: 1607.8
Samples: 4

Max nTPM: 1994.7
Min nTPM: 1273.4
Sample A Male 1273.4
Sample B Male 1994.7
Sample C Female 1754.2
Sample D Female 1408.8
Ventral forebrain
nTPM: 1397.3
Samples: 4

Max nTPM: 1818.2
Min nTPM: 1248.5
Sample A Male 1257.7
Sample B Male 1264.6
Sample C Female 1818.2
Sample D Female 1248.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.9
69012777 Antisense, RP_050309_01_E01, Mouse strain C57BL/6J (56 days, male) 8.9
Pallidum
Expression energy: 8.0
69012777 Antisense, RP_050309_01_E01, Mouse strain C57BL/6J (56 days, male) 8.0

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