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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:131.4 nTPM
HPA Brain:67.5 nTPM
GTEx:131.4 nTPM
FANTOM5:106.6 Scaled Tags Per Million
Pig:10.9 nTPM
Mouse:347.1 nTPM
Allen mouse:2.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051895Antibody CAB017831Antibody CAB040577
Glial cells Not detectedNot detectedLow
Neuronal cells Not detectedLowMedium






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 57.7
2481 Female, age 94, left hemisphere 83.1
1854 Male, age 80, left hemisphere 77.6
2289 Male, age 61, right hemisphere 69.2
1857 Female, age 85, left hemisphere 60.1
2290 Female, age 72, unknown 57.6
1781 Male, age 74, unknown 47.4
2846 Female, age 79, unknown 40.8
2288 Male, age 75, left hemisphere 25.8
Globus pallidus, externus
nTPM: 49.3
1996 Male, age 80, right hemisphere 74.3
2772 Female, age 79, unknown 64.6
2395 Male, age 75, both hemispheres 50.5
2567 Female, age 72, unknown 29.1
2646 Male, age 61, right hemisphere 27.8
Globus pallidus, internus
nTPM: 41.7
2037 Male, age 80, right hemisphere 58.8
2287 Male, age 75, right hemisphere 46.9
1818 Male, age 74, unknown 46.3
2566 Female, age 72, unknown 38.9
2483 Female, age 94, right hemisphere 37.2
2111 Female, age 85, right hemisphere 33.3
2778 Female, age 91, both hemispheres 30.4
Nucleus accumbens
nTPM: 47.6
2698 Female, age 72, unknown 63.2
1806 Female, age 85, left hemisphere 62.5
1856 Female, age 91, right hemisphere 58.5
2391 Female, age 94, left hemisphere 53.4
2732 Male, age 80, right hemisphere 51.4
1783 Male, age 74, unknown 38.3
2824 Male, age 61, right hemisphere 27.7
2286 Male, age 75, left hemisphere 25.9
Nucleus basalis of Meynert
nTPM: 51.4
2393 Male, age 80, right hemisphere 72.6
2821 Male, age 75, both hemispheres 64.3
2484 Female, age 94, left hemisphere 38.9
2569 Male, age 61, both hemispheres 29.7
Nucleus of the diagonal band
nTPM: 61.4
2195 Female, age 85, both hemispheres 83.2
1979 Male, age 74, unknown 64.7
1812 Female, age 91, both hemispheres 64.0
2775 Male, age 80, right hemisphere 57.3
2029 Male, age 61, right hemisphere 37.7
Putamen
nTPM: 43.3
1838 Male, age 80, right hemisphere 68.1
2482 Female, age 94, left hemisphere 64.2
1829 Male, age 74, unknown 39.9
1937 Female, age 91, right hemisphere 38.9
2489 Female, age 72, unknown 38.6
2466 Female, age 79, unknown 32.0
2647 Male, age 75, left hemisphere 21.4
Septal nuclei
nTPM: 67.5
2629 Female, age 94, right hemisphere 101.5
2199 Male, age 80, right hemisphere 76.4
2009 Female, age 91, both hemispheres 69.8
2059 Female, age 85, both hemispheres 62.8
1960 Male, age 74, unknown 62.1
2031 Female, age 72, unknown 50.4
2394 Male, age 61, left hemisphere 49.5
Stria terminalis, bed nucleus
nTPM: 56.5
1974 Female, age 91, both hemispheres 59.8
2486 Female, age 94, both hemispheres 57.2
2201 Male, age 74, unknown 52.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

131.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 125.2
Samples: 246

Max nTPM: 694.8
Min nTPM: 38.3
Std nTPM: 77.1
Median nTPM: 102.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 694.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 543.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 444.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 378.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 361.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 326.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 318.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 315.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 298.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 295.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 293.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 270.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 265.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 265.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 264.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 256.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 243.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 240.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 239.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 239.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 234.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 228.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 215.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 214.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 210.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 208.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 206.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 204.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 197.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 197.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 195.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 188.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 182.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 178.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 178.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 173.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 172.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 171.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 170.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 169.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 167.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 159.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 158.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 156.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 154.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 153.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 153.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 152.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 152.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 150.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 149.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 148.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 144.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 144.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 143.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 143.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 141.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 141.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 139.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 138.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 137.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 137.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 137.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 135.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 133.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 133.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 132.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 132.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 131.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 130.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 129.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 129.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 128.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 127.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 127.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 126.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 125.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 121.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 121.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 120.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 120.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 120.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 118.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 118.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 118.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 117.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 117.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 115.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 115.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 115.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 115.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 114.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 113.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 113.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 113.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 113.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 113.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 112.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 112.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 112.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 112.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 111.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 111.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 109.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 109.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 108.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 108.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 107.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 107.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 107.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 106.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 106.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 105.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 105.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 104.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 103.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 103.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 103.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 103.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 103.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 103.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 103.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 102.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 102.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 101.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 101.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 100.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 100.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 98.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 98.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 96.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 96.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 96.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 95.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 95.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 95.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 95.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 95.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 94.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 94.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 94.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 94.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 94.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 94.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 94.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 94.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 94.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 94.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 94.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 93.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 93.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 93.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 93.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 93.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 93.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 93.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 93.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 93.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 93.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 93.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 92.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 92.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 92.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 92.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 91.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 90.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 90.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 90.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 89.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 88.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 88.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 88.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 88.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 87.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 86.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 86.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 86.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 86.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 86.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 85.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 85.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 85.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 84.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 84.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 84.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 84.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 83.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 83.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 83.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 82.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 82.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 81.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 81.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 81.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 81.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 80.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 80.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 80.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 80.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 80.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 79.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 78.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 78.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 77.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 77.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 76.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 76.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 75.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 74.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 74.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 74.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 73.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 73.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 72.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 72.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 72.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 71.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 71.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 70.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 69.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 69.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 69.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 68.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 68.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 67.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 67.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 65.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 64.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 64.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 63.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 63.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 62.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 59.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 59.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 58.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 57.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 57.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 57.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 56.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 54.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 52.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 49.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 47.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 47.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 42.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 38.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 131.4
Samples: 246

Max nTPM: 834.5
Min nTPM: 52.5
Std nTPM: 84.0
Median nTPM: 108.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 834.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 644.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 505.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 406.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 383.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 375.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 360.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 311.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 304.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 301.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 300.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 297.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 277.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 276.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 256.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 250.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 244.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 242.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 230.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 223.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 216.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 208.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 207.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 207.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 204.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 202.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 200.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 184.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 184.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 182.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 181.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 180.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 178.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 176.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 175.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 172.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 172.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 171.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 166.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 165.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 165.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 164.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 163.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 161.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 160.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 159.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 156.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 155.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 152.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 150.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 148.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 147.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 147.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 143.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 142.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 142.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 142.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 141.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 141.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 141.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 141.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 140.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 139.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 138.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 135.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 135.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 132.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 132.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 132.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 129.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 127.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 126.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 126.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 125.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 125.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 124.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 124.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 124.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 121.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 121.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 121.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 120.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 120.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 120.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 120.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 119.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 119.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 119.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 118.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 118.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 118.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 117.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 117.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 117.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 117.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 117.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 117.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 116.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 116.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 114.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 114.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 113.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 113.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 113.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 113.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 112.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 112.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 111.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 111.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 111.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 111.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 111.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 110.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 110.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 110.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 110.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 110.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 109.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 109.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 109.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 109.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 109.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 109.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 108.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 108.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 108.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 108.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 107.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 107.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 107.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 107.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 106.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 106.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 106.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 105.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 105.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 104.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 103.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 103.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 103.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 102.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 102.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 101.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 101.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 101.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 101.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 101.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 101.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 100.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 100.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 99.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 99.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 99.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 99.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 99.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 99.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 98.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 98.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 98.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 98.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 98.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 98.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 98.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 97.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 97.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 97.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 97.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 97.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 97.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 96.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 96.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 96.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 95.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 95.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 95.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 95.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 94.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 94.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 94.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 94.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 94.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 93.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 92.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 92.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 92.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 91.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 91.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 91.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 91.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 90.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 90.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 89.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 89.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 89.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 88.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 88.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 87.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 87.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 87.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 87.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 86.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 85.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 85.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 85.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 85.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 84.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 83.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 83.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 83.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 83.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 82.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 82.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 81.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 80.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 79.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 79.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 78.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 77.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 77.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 77.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 75.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 75.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 75.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 75.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 74.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 74.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 74.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 73.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 73.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 72.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 72.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 72.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 71.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 71.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 71.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 69.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 69.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 68.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 67.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 67.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 66.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 65.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 64.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 60.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 53.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 52.5
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Brain - Putamen (basal ganglia)
Average nTPM: 102.6
Samples: 205

Max nTPM: 525.9
Min nTPM: 34.0
Std nTPM: 68.2
Median nTPM: 80.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 525.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 416.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 340.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 333.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 324.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 315.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 298.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 283.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 273.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 273.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 267.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 264.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 226.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 215.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 204.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 200.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 200.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 195.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 189.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 176.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 176.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 170.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 170.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 169.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 165.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 164.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 158.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 157.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 141.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 138.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 135.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 134.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 133.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 132.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 130.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 128.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 128.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 119.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 119.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 119.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 118.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 117.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 115.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 114.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 112.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 111.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 111.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 109.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 109.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 109.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 109.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 108.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 108.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 107.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 105.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 105.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 104.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 104.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 102.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 102.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 101.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 99.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 97.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 97.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 97.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 96.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 95.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 95.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 95.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 94.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 93.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 93.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 92.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 91.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 91.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 90.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 90.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 89.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 89.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 88.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 88.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 88.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 87.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 86.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 86.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 86.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 86.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 84.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 84.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 84.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 84.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 83.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 83.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 83.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 83.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 82.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 82.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 82.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 81.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 81.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 81.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 80.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 80.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 80.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 79.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 79.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 79.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 78.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 78.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 78.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 78.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 78.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 78.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 77.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 76.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 76.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 76.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 76.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 76.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 76.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 75.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 75.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 75.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 75.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 74.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 74.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 74.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 74.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 74.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 74.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 73.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 72.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 72.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 72.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 72.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 72.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 72.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 71.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 71.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 71.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 71.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 70.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 70.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 69.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 69.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 68.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 68.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 67.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 67.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 67.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 67.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 67.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 66.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 65.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 65.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 65.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 65.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 64.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 64.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 64.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 64.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 64.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 63.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 63.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 62.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 62.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 61.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 61.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 60.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 60.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 60.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 60.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 59.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 59.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 59.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 59.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 59.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 59.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 58.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 58.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 58.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 57.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 57.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 56.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 56.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 56.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 55.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 55.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 54.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 54.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 52.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 52.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 50.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 50.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 49.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 48.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 48.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 46.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 45.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 43.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 43.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 43.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 40.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 36.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 34.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

106.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 106.6
FF:10164-103B2 76 years, female 106.6
Nucleus accumbens
Scaled Tags Per Million: 23.5
FF:10037-101F1 23-56 years, mixed 23.5
Putamen
Scaled Tags Per Million: 64.7
FF:10176-103C5 60 years, female 64.7
Globus pallidus
Scaled Tags Per Million: 66.1
FF:10161-103A8 76 years, female 73.3
FF:10175-103C4 60 years, female 58.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.9
Pig sample Sample description nTPM
Caudate
nTPM: 10.8
Samples: 4

Max nTPM: 13.3
Min nTPM: 8.3
Sample A Female 10.7
Sample B Female 8.3
Sample C Male 13.3
Sample D Male 10.9
Putamen
nTPM: 10.6
Samples: 4

Max nTPM: 15.3
Min nTPM: 5.8
Sample A Female 5.8
Sample B Female 9.2
Sample C Male 12.0
Sample D Male 15.3
Septum
nTPM: 10.6
Samples: 4

Max nTPM: 16.3
Min nTPM: 4.7
Sample A Female 4.7
Sample B Female 10.0
Sample C Male 16.3
Sample D Male 11.5
Ventral pallidum
nTPM: 11.0
Samples: 4

Max nTPM: 19.1
Min nTPM: 6.2
Sample A Female 6.2
Sample B Female 19.1
Sample C Male 10.1
Sample D Male 8.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

347.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 347.1
Samples: 4

Max nTPM: 372.1
Min nTPM: 310.8
Sample A Male 333.9
Sample B Male 310.8
Sample C Female 371.5
Sample D Female 372.1
Septum
nTPM: 296.3
Samples: 4

Max nTPM: 319.8
Min nTPM: 269.7
Sample A Male 269.7
Sample B Male 292.9
Sample C Female 319.8
Sample D Female 302.6
Ventral forebrain
nTPM: 325.0
Samples: 4

Max nTPM: 368.1
Min nTPM: 296.2
Sample A Male 301.7
Sample B Male 296.2
Sample C Female 368.1
Sample D Female 334.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.0
70634396 Antisense, RP_050725_01_F09, Mouse strain C57BL/6J (56 days, male) 3.7
631728 Antisense, RP_040907_01_C08, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 2.6
70634396 Antisense, RP_050725_01_F09, Mouse strain C57BL/6J (56 days, male) 4.8
631728 Antisense, RP_040907_01_C08, Mouse strain C57BL/6J (56 days, male) 0.4

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