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ALDH1A1
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  • ALDH1A1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:132.9 nTPM
HPA Brain:85.5 nTPM
GTEx:132.9 nTPM
FANTOM5:73.1 Scaled Tags Per Million
Pig:19.8 nTPM
Mouse:108.2 nTPM
Allen mouse:0.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002123Antibody CAB020690
Glial cells Not detectedLow
Neuronal cells MediumNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 59.3
2481 Female, age 94, left hemisphere 118.7
2288 Male, age 75, left hemisphere 99.5
2846 Female, age 79, unknown 64.0
2289 Male, age 61, right hemisphere 52.3
2290 Female, age 72, unknown 44.0
1781 Male, age 74, unknown 33.7
1857 Female, age 85, left hemisphere 32.4
1854 Male, age 80, left hemisphere 30.3
Globus pallidus, externus
nTPM: 73.2
1996 Male, age 80, right hemisphere 102.2
2646 Male, age 61, right hemisphere 84.5
2772 Female, age 79, unknown 69.5
2395 Male, age 75, both hemispheres 63.7
2567 Female, age 72, unknown 45.9
Globus pallidus, internus
nTPM: 61.2
2483 Female, age 94, right hemisphere 92.0
2037 Male, age 80, right hemisphere 78.2
2778 Female, age 91, both hemispheres 60.2
1818 Male, age 74, unknown 57.1
2287 Male, age 75, right hemisphere 56.8
2111 Female, age 85, right hemisphere 53.9
2566 Female, age 72, unknown 30.3
Nucleus accumbens
nTPM: 31.6
2391 Female, age 94, left hemisphere 86.9
2286 Male, age 75, left hemisphere 65.1
2698 Female, age 72, unknown 22.6
1783 Male, age 74, unknown 21.8
1806 Female, age 85, left hemisphere 17.5
2732 Male, age 80, right hemisphere 15.4
1856 Female, age 91, right hemisphere 13.7
2824 Male, age 61, right hemisphere 9.8
Nucleus basalis of Meynert
nTPM: 76.5
2484 Female, age 94, left hemisphere 94.0
2569 Male, age 61, both hemispheres 88.0
2393 Male, age 80, right hemisphere 76.8
2821 Male, age 75, both hemispheres 47.1
Nucleus of the diagonal band
nTPM: 7.0
1979 Male, age 74, unknown 11.4
2029 Male, age 61, right hemisphere 10.5
1812 Female, age 91, both hemispheres 7.2
2775 Male, age 80, right hemisphere 3.1
2195 Female, age 85, both hemispheres 2.9
Putamen
nTPM: 85.5
2482 Female, age 94, left hemisphere 122.7
2489 Female, age 72, unknown 120.8
2647 Male, age 75, left hemisphere 106.0
1829 Male, age 74, unknown 91.1
2466 Female, age 79, unknown 77.4
1937 Female, age 91, right hemisphere 46.1
1838 Male, age 80, right hemisphere 34.6
Septal nuclei
nTPM: 11.3
2199 Male, age 80, right hemisphere 31.5
2394 Male, age 61, left hemisphere 16.5
2031 Female, age 72, unknown 9.7
2629 Female, age 94, right hemisphere 8.1
2059 Female, age 85, both hemispheres 6.4
2009 Female, age 91, both hemispheres 5.1
1960 Male, age 74, unknown 1.9
Stria terminalis, bed nucleus
nTPM: 12.7
2201 Male, age 74, unknown 19.7
1974 Female, age 91, both hemispheres 13.4
2486 Female, age 94, both hemispheres 4.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 93.1
Samples: 246

Max nTPM: 394.7
Min nTPM: 5.2
Std nTPM: 54.1
Median nTPM: 82.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 394.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 319.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 278.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 254.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 238.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 227.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 224.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 223.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 214.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 211.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 203.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 187.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 187.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 181.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 180.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 180.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 173.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 172.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 171.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 171.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 170.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 166.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 166.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 166.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 165.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 165.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 158.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 153.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 152.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 152.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 150.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 150.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 149.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 149.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 145.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 143.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 139.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 138.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 138.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 136.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 134.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 133.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 131.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 131.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 130.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 129.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 128.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 127.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 127.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 126.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 126.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 125.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 124.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 123.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 122.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 122.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 121.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 121.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 121.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 121.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 121.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 121.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 120.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 119.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 116.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 116.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 115.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 112.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 111.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 111.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 111.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 109.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 108.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 108.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 108.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 108.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 108.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 106.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 106.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 105.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 105.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 105.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 105.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 104.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 103.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 103.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 100.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 99.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 98.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 98.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 97.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 96.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 95.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 94.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 94.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 93.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 93.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 93.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 93.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 92.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 91.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 91.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 91.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 91.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 91.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 90.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 89.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 88.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 88.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 87.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 87.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 87.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 87.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 86.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 86.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 86.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 84.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 83.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 83.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 83.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 82.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 82.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 82.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 81.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 81.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 81.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 80.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 80.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 79.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 79.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 79.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 78.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 78.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 78.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 78.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 78.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 78.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 76.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 76.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 76.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 75.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 75.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 75.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 75.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 75.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 73.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 73.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 73.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 73.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 73.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 72.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 72.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 72.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 71.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 71.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 71.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 70.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 70.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 69.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 69.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 68.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 68.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 67.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 67.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 66.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 66.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 65.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 65.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 65.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 64.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 64.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 63.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 62.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 62.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 62.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 62.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 60.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 59.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 59.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 59.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 59.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 58.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 58.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 57.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 56.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 56.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 55.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 55.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 54.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 54.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 53.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 53.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 52.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 52.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 52.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 52.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 50.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 50.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 49.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 49.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 49.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 49.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 49.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 47.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 47.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 46.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 46.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 44.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 43.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 41.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 41.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 40.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 39.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 39.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 38.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 38.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 37.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 36.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 36.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 36.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 34.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 34.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 34.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 33.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 32.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 32.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 31.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 31.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 30.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 29.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 28.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 26.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 26.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 26.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 26.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 25.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 25.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 25.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 23.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 23.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 21.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 18.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 16.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 15.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 7.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 5.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 16.7
Samples: 246

Max nTPM: 274.4
Min nTPM: 0.4
Std nTPM: 27.5
Median nTPM: 9.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 274.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 222.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 107.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 101.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 93.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 93.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 79.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 76.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 71.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 63.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 56.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 50.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 50.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 48.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 46.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 46.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 45.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 43.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 41.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 40.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 40.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 39.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 39.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 36.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 36.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 34.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 34.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 33.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 32.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 32.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 31.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 31.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 30.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 30.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 30.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 30.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 29.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 28.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 27.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 27.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 27.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 27.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 26.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 26.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 26.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 25.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 25.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 25.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 24.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 23.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 23.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 22.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 22.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 22.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 21.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 21.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 20.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 20.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 19.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 18.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 18.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 18.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 17.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 17.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 17.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 17.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 17.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 16.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 16.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 16.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 16.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 15.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 15.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 15.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 15.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 14.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 14.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 14.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 14.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 14.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 13.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 13.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 12.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 12.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 12.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 12.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 12.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 12.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 12.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 12.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 12.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 12.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 12.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 11.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 11.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 11.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 11.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 11.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 11.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 11.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 11.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 11.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 10.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 10.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 10.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 10.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 10.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 10.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 10.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 10.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 10.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 9.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 9.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 9.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 9.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 9.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 9.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 9.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 9.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 9.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 9.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 9.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 9.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 8.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 8.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 8.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 8.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 8.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 8.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 8.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 8.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 8.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 7.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 7.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 7.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 7.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 7.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 7.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 7.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 7.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 7.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 7.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 7.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 7.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 7.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 7.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 7.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 7.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 7.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 7.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 7.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 6.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 6.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 6.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 6.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 6.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 6.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 6.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 6.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 6.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 5.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 5.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 5.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 5.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 5.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 5.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 5.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 5.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 5.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 5.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 5.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 5.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 4.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 4.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 4.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 4.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 4.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 4.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 4.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 4.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 4.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 4.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 3.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 3.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 3.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 3.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 3.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 3.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 3.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 3.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 3.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 3.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 3.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 3.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 3.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 3.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 2.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 2.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 2.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 2.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 2.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 2.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 2.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 2.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 2.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 2.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 2.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 2.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 2.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 2.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 2.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 2.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 2.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 2.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 2.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 2.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 2.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 2.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 1.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 1.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 1.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 1.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 1.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 1.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 1.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 1.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 1.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 1.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 1.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 1.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 1.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 1.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 1.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 1.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 0.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 0.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 0.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 0.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 0.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 0.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 0.4
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Brain - Putamen (basal ganglia)
Average nTPM: 132.9
Samples: 205

Max nTPM: 397.0
Min nTPM: 19.2
Std nTPM: 72.1
Median nTPM: 122.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 397.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 389.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 381.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 364.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 322.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 315.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 275.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 272.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 266.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 261.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 261.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 258.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 249.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 248.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 247.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 244.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 242.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 237.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 235.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 228.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 225.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 222.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 221.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 220.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 218.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 217.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 217.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 215.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 211.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 207.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 206.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 205.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 200.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 197.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 196.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 196.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 195.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 192.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 192.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 190.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 189.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 188.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 187.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 187.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 184.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 183.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 181.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 179.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 175.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 175.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 170.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 167.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 165.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 165.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 165.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 164.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 161.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 161.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 161.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 160.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 158.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 155.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 154.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 153.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 153.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 153.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 152.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 151.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 151.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 151.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 150.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 150.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 150.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 150.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 146.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 146.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 145.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 145.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 144.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 143.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 143.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 142.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 141.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 141.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 141.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 141.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 138.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 136.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 136.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 133.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 131.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 129.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 129.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 126.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 126.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 126.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 126.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 126.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 124.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 123.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 122.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 122.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 122.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 121.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 120.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 118.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 117.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 116.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 116.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 114.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 114.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 114.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 114.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 114.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 112.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 111.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 111.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 111.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 109.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 108.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 106.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 104.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 102.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 100.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 100.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 100.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 99.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 99.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 99.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 98.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 98.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 96.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 96.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 94.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 94.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 93.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 92.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 92.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 91.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 89.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 89.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 88.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 87.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 86.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 84.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 83.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 83.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 82.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 80.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 80.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 80.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 79.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 78.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 77.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 77.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 77.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 77.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 77.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 76.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 75.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 74.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 73.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 73.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 73.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 72.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 72.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 71.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 70.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 69.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 68.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 68.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 65.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 64.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 63.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 62.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 62.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 62.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 61.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 59.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 58.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 57.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 57.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 56.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 55.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 55.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 55.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 51.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 48.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 46.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 46.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 45.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 41.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 39.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 36.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 35.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 33.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 33.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 32.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 31.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 30.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 25.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 24.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 24.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 24.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 19.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

73.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 6.9
FF:10164-103B2 76 years, female 6.9
Nucleus accumbens
Scaled Tags Per Million: 32.7
FF:10037-101F1 23-56 years, mixed 32.7
Putamen
Scaled Tags Per Million: 13.2
FF:10176-103C5 60 years, female 13.2
Globus pallidus
Scaled Tags Per Million: 73.1
FF:10161-103A8 76 years, female 82.0
FF:10175-103C4 60 years, female 64.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.8
Pig sample Sample description nTPM
Caudate
nTPM: 14.7
Samples: 4

Max nTPM: 16.0
Min nTPM: 11.4
Sample A Female 16.0
Sample B Female 15.7
Sample C Male 11.4
Sample D Male 15.7
Putamen
nTPM: 19.8
Samples: 4

Max nTPM: 31.6
Min nTPM: 7.3
Sample A Female 7.3
Sample B Female 21.0
Sample C Male 31.6
Sample D Male 19.3
Septum
nTPM: 7.3
Samples: 4

Max nTPM: 10.5
Min nTPM: 3.7
Sample A Female 3.7
Sample B Female 4.7
Sample C Male 10.5
Sample D Male 10.3
Ventral pallidum
nTPM: 10.3
Samples: 4

Max nTPM: 27.6
Min nTPM: 3.5
Sample A Female 3.5
Sample B Female 27.6
Sample C Male 5.5
Sample D Male 4.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 108.2
Samples: 4

Max nTPM: 113.9
Min nTPM: 100.9
Sample A Male 100.9
Sample B Male 111.6
Sample C Female 106.3
Sample D Female 113.9
Septum
nTPM: 52.4
Samples: 4

Max nTPM: 62.5
Min nTPM: 44.4
Sample A Male 49.4
Sample B Male 44.4
Sample C Female 53.3
Sample D Female 62.5
Ventral forebrain
nTPM: 104.0
Samples: 4

Max nTPM: 115.1
Min nTPM: 95.4
Sample A Male 96.4
Sample B Male 109.0
Sample C Female 115.1
Sample D Female 95.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.3
72103809 Antisense, RP_051017_03_D07, Mouse strain C57BL/6J (56 days, male) 0.3
69013627 Antisense, RP_050309_02_F10, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 0.2
69013627 Antisense, RP_050309_02_F10, Mouse strain C57BL/6J (56 days, male) 0.2
72103809 Antisense, RP_051017_03_D07, Mouse strain C57BL/6J (56 days, male) 0.2

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