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ALDH1A1
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  • ALDH1A1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:93.1 nTPM
FANTOM5:6.9 Scaled Tags Per Million
Pig:14.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002123Antibody CAB020690
Glial cells Not detectedLow
Neuronal cells MediumNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 93.1
Samples: 246

Max nTPM: 394.7
Min nTPM: 5.2
Std nTPM: 54.1
Median nTPM: 82.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 394.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 319.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 278.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 254.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 238.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 227.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 224.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 223.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 214.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 211.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 203.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 187.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 187.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 181.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 180.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 180.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 173.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 172.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 171.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 171.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 170.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 166.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 166.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 166.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 165.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 165.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 158.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 153.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 152.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 152.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 150.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 150.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 149.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 149.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 145.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 143.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 139.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 138.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 138.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 136.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 134.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 133.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 131.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 131.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 130.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 129.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 128.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 127.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 127.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 126.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 126.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 125.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 124.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 123.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 122.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 122.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 121.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 121.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 121.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 121.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 121.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 121.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 120.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 119.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 116.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 116.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 115.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 112.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 111.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 111.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 111.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 109.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 108.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 108.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 108.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 108.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 108.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 106.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 106.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 105.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 105.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 105.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 105.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 104.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 103.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 103.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 100.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 99.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 98.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 98.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 97.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 96.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 95.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 94.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 94.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 93.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 93.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 93.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 93.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 92.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 91.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 91.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 91.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 91.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 91.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 90.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 89.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 88.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 88.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 87.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 87.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 87.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 87.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 86.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 86.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 86.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 84.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 83.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 83.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 83.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 82.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 82.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 82.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 81.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 81.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 81.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 80.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 80.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 79.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 79.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 79.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 78.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 78.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 78.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 78.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 78.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 78.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 76.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 76.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 76.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 75.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 75.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 75.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 75.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 75.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 73.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 73.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 73.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 73.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 73.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 72.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 72.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 72.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 71.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 71.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 71.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 70.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 70.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 69.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 69.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 68.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 68.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 67.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 67.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 66.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 66.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 65.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 65.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 65.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 64.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 64.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 63.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 62.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 62.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 62.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 62.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 60.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 59.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 59.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 59.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 59.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 58.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 58.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 57.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 56.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 56.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 55.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 55.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 54.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 54.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 53.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 53.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 52.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 52.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 52.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 52.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 50.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 50.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 49.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 49.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 49.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 49.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 49.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 47.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 47.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 46.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 46.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 44.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 43.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 41.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 41.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 40.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 39.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 39.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 38.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 38.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 37.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 36.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 36.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 36.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 34.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 34.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 34.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 33.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 32.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 32.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 31.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 31.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 30.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 29.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 28.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 26.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 26.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 26.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 26.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 25.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 25.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 25.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 23.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 23.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 21.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 18.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 16.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 15.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 7.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 5.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

6.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 6.9
FF:10164-103B2 76 years, female 6.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.7
Pig sample Sample description nTPM
Caudate
nTPM: 14.7
Samples: 4

Max nTPM: 16.0
Min nTPM: 11.4
Sample A Female 16.0
Sample B Female 15.7
Sample C Male 11.4
Sample D Male 15.7

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