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ALDH1A1
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  • ALDH1A1
TISSUE PRIMARY DATA CEREBELLUM Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Cerebellum
Tissue proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Not detected
Cells in molecular layer: Low
Purkinje cells: Not detected
Mouse brain, Intensity
Cerebellumi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

107.069
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:140.3 nTPM
HPA Brain:197.6 nTPM
GTEx:140.3 nTPM
FANTOM5:226.1 Scaled Tags Per Million
Pig:5.8 nTPM
Mouse:505.8 nTPM
Allen mouse:0.7 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002123Antibody CAB020690
Purkinje cells Not detectedNot detected
Cells in granular layer Not detectedNot detected
Cells in molecular layer LowLow





CEREBELLUM - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA002123
Cerebellum mean intensity 107.069
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Vestibulocerebellar nucleus -
Moleuclar layer of the cerebellum 107.069
Purkinje layer of the cerebellum 77.922
Granular layer of the cerebellum 59.132

CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

197.6
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 197.6
2006 Male, age 61, right hemisphere 295.3
2003 Female, age 85, right hemisphere 263.2
1768 Female, age 72, unknown 249.4
2055 Female, age 91, right hemisphere 214.5
2101 Male, age 74, right hemisphere 162.6
1788 Male, age 55, unknown 154.8
1769 Male, age 76, right hemisphere 134.0
1774 Male, age 80, left hemisphere 107.2
Cerebellar nuclei
nTPM: 92.3
2175 Male, age 61, right hemisphere 126.4
2177 Female, age 85, both hemispheres 123.5
2005 Male, age 80, left hemisphere 98.1
2783 Female, age 72, unknown 94.1
1966 Female, age 91, left hemisphere 89.3
1871 Male, age 74, unknown 83.5
2318 Male, age 74, left hemisphere 81.3
2882 Male, age 76, left hemisphere 72.4
1879 Male, age 55, unknown 62.0
Flocculonodular lobe
nTPM: 149.9
1765 Male, age 55, unknown 204.2
2176 Female, age 91, right hemisphere 194.0
1792 Male, age 74, unknown 192.0
1835 Female, age 85, right hemisphere 137.3
2004 Male, age 61, right hemisphere 125.6
1767 Male, age 76, left hemisphere 105.3
1771 Male, age 80, left hemisphere 90.9
Vermis
nTPM: 147.9
1778 Female, age 91, left hemisphere 229.9
1751 Male, age 74, right hemisphere 205.5
1928 Female, age 72, unknown 192.7
1825 Male, age 74, unknown 152.1
1766 Male, age 55, unknown 122.6
1770 Male, age 76, left hemisphere 117.0
2834 Male, age 80, left hemisphere 112.3
1988 Female, age 85, left hemisphere 101.7
2460 Male, age 61, both hemispheres 97.4

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.3
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 102.3
Samples: 215

Max nTPM: 358.6
Min nTPM: 15.9
Std nTPM: 52.1
Median nTPM: 94.9
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 358.6
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 345.4
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 291.8
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 278.8
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 253.6
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 238.3
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 211.5
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 203.6
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 202.4
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 196.1
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 188.8
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 188.1
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 180.2
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 180.0
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 179.1
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 174.5
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 171.9
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 171.8
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 168.0
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 167.4
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 165.3
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 161.8
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 159.0
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 154.8
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 154.7
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 154.5
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 152.4
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 152.3
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 149.1
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 148.7
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 147.0
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 146.0
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 145.0
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 144.8
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 144.5
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 144.2
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 142.5
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 141.2
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 138.0
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 137.5
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 136.8
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 136.7
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 135.4
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 135.4
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 134.5
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 134.3
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 133.4
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 131.9
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 131.3
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 129.3
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 129.2
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 127.7
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 126.7
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 125.9
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 125.8
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 124.7
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 124.6
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 123.6
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 122.7
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 122.3
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 122.1
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 121.5
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 121.0
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 120.9
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 120.0
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 119.5
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 118.9
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 118.0
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 117.6
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 117.5
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 117.3
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 117.1
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 116.9
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 116.0
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 115.7
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 115.6
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 114.2
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 114.1
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 112.9
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 112.4
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 111.0
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 110.6
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 110.3
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 108.7
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 108.4
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 107.3
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 106.0
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 105.7
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 105.7
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 103.2
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 103.2
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 103.0
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 102.8
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 102.4
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 101.8
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 101.5
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 99.8
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 99.4
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 99.3
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 98.4
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 98.2
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 97.2
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 97.1
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 97.0
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 96.6
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 96.3
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 96.3
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 94.9
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 93.9
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 92.2
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 91.8
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 91.0
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 87.8
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 87.4
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 86.8
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 86.7
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 86.6
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 86.6
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 85.5
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 85.3
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 84.4
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 84.0
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 83.9
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 83.7
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 83.4
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 83.0
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 82.3
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 81.6
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 81.6
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 81.0
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 80.6
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 80.5
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 80.0
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 79.6
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 79.1
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 78.6
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 78.6
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 78.3
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 76.8
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 76.8
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 76.0
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 75.7
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 73.8
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 73.7
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 73.6
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 72.9
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 72.5
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 71.5
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 71.1
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 70.6
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 69.6
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 69.5
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 69.4
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 69.3
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 68.9
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 68.9
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 68.4
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 68.0
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 67.3
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 67.2
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 65.8
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 64.3
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 62.9
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 62.7
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 62.4
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 62.1
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 62.1
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 61.7
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 61.4
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 60.3
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 59.9
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 59.5
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 59.1
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 58.4
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 58.1
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 57.7
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 57.0
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 57.0
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 55.6
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 55.6
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 55.5
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 55.5
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 55.3
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 54.5
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 54.3
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 54.1
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 54.0
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 53.5
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 53.2
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 53.0
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 52.5
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 51.8
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 51.1
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 49.5
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 49.1
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 47.9
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 47.4
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 46.5
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 46.2
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 45.3
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 44.3
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 43.4
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 41.1
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 39.2
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 38.9
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 38.0
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 37.3
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 37.1
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 35.4
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 34.1
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 33.1
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 31.0
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 29.4
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 25.5
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 15.9
Show allShow less
Brain - Cerebellum
Average nTPM: 140.3
Samples: 241

Max nTPM: 319.4
Min nTPM: 31.8
Std nTPM: 54.5
Median nTPM: 137.5
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 319.4
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 318.8
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 309.4
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 309.1
GTEX-RU72-2926-SM-2TF66 50-59 years, female 296.6
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 293.3
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 279.7
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 279.6
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 269.6
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 242.5
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 240.1
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 234.4
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 231.3
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 230.8
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 230.0
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 223.9
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 223.2
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 218.1
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 215.5
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 215.0
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 213.6
GTEX-144GL-2926-SM-5O99F 50-59 years, male 213.5
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 209.4
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 208.4
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 207.5
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 205.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 204.2
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 201.9
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 197.8
GTEX-11DYG-2926-SM-5H132 60-69 years, male 197.0
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 196.6
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 195.8
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 195.8
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 195.0
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 194.3
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 193.7
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 192.9
GTEX-12126-0926-SM-5FQTW 20-29 years, male 192.5
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 189.8
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 189.7
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 188.2
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 187.2
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 186.5
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 184.9
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 182.9
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 181.3
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 181.3
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 181.3
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 181.1
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 179.8
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 179.4
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 177.9
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 175.9
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 175.3
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 175.0
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 174.5
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 174.4
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 173.6
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 172.5
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 171.4
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 171.4
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 169.0
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 168.9
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 167.6
GTEX-17HII-2926-SM-79OMK 50-59 years, male 167.4
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 166.2
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 165.8
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 165.6
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 163.6
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 163.0
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 162.9
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 162.2
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 161.7
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 160.7
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 160.0
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 159.0
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 157.2
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 157.0
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 156.7
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 156.2
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 155.8
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 154.8
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 154.4
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 154.2
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 152.8
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 152.4
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 152.4
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 152.0
GTEX-13112-2926-SM-5DUWT 50-59 years, male 150.9
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 150.0
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 149.7
GTEX-1B933-3026-SM-731DB 50-59 years, female 148.7
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 148.3
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 147.0
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 146.9
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 146.0
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 145.7
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 145.5
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 145.0
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 144.6
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 144.5
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 144.5
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 144.4
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 144.4
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 144.1
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 144.0
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 143.8
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 143.5
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 143.1
GTEX-11ONC-3026-SM-5985W 60-69 years, male 142.4
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 141.7
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 141.6
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 140.2
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 140.1
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 139.8
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 139.3
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 139.3
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 139.1
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 137.7
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 137.7
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 137.5
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 137.2
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 136.2
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 135.9
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 134.7
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 134.1
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 133.5
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 133.1
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 133.0
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 132.9
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 132.7
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 132.4
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 132.3
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 132.1
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 132.0
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 131.7
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 131.6
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 131.5
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 131.1
GTEX-18465-2926-SM-7KFSE 50-59 years, male 130.2
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 130.0
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 129.1
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 126.8
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 126.6
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 125.7
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 125.6
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 125.1
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 124.4
GTEX-145LS-3026-SM-5O99S 60-69 years, female 123.0
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 122.6
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 122.2
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 121.6
GTEX-17EVP-2926-SM-793BU 40-49 years, male 120.9
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 120.8
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 120.0
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 119.2
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 118.9
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 117.4
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 116.9
GTEX-1192X-3226-SM-5987D 50-59 years, male 115.5
GTEX-15G19-2826-SM-6M48K 60-69 years, male 115.0
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 113.6
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 112.2
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 111.5
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 110.8
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 110.6
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 110.2
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 108.8
GTEX-11EI6-2926-SM-5985U 60-69 years, male 108.0
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 107.5
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 107.0
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 107.0
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 106.1
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 105.6
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 105.3
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 104.9
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 104.2
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 104.1
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 102.5
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 102.3
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 101.8
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 99.3
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 98.8
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 98.6
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 97.3
GTEX-14PN4-3026-SM-664O4 50-59 years, male 96.6
GTEX-X261-3126-SM-4PQZC 50-59 years, male 95.9
GTEX-14E6D-2926-SM-664OP 50-59 years, male 94.7
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 94.7
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 93.5
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 92.8
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 92.6
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 92.2
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 92.0
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 91.7
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 90.5
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 89.9
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 87.6
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 87.4
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 87.1
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 87.0
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 87.0
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 86.8
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 86.5
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 86.3
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 86.3
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 85.7
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 84.5
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 84.0
GTEX-11NUK-3026-SM-5986K 50-59 years, male 83.8
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 83.1
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 82.0
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 80.5
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 76.6
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 76.5
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 75.4
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 75.0
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 74.8
GTEX-14ABY-3026-SM-664NE 50-59 years, male 73.2
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 72.8
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 70.1
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 70.1
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 69.1
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 69.1
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 65.0
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 63.6
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 63.6
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 61.0
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 60.6
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 58.1
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 57.1
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 56.7
GTEX-WL46-2826-SM-3LK81 50-59 years, male 54.7
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 52.9
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 52.3
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 52.1
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 51.9
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 50.7
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 39.9
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 37.7
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 31.8
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

226.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 226.1
FF:10166-103B4 76 years, female 260.5
FF:10083-102B2 22-68 years, mixed 191.6

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5.8
Pig sample Sample description nTPM
Cerebellum
nTPM: 5.9
Samples: 4

Max nTPM: 7.1
Min nTPM: 4.9
Sample A Female 7.1
Sample B Female 5.4
Sample C Male 4.9
Sample D Male 6.0

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

505.8
Mouse sample Sample description nTPM
Cerebellum
nTPM: 505.8
Samples: 4

Max nTPM: 530.0
Min nTPM: 483.6
Sample A Male 483.6
Sample B Male 525.4
Sample C Female 484.3
Sample D Female 530.0

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.7
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 0.7
69013627 Antisense, RP_050309_02_F10, Mouse strain C57BL/6J (56 days, male) 0.7
72103809 Antisense, RP_051017_03_D07, Mouse strain C57BL/6J (56 days, male) 0.7

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