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RPL27A
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BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1285.4 nTPM
HPA Brain:277.5 nTPM
GTEx:1285.4 nTPM
FANTOM5:46.0 Scaled Tags Per Million
Mouse:220.5 nTPM
Allen mouse:11.0 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

277.5
Sample id Sample description nTPM
Amygdala
nTPM: 277.5
2695 Female, age 67, right hemisphere 372.7
2514 Male, age 75, right hemisphere 299.9
1987 Female, age 91, left hemisphere 247.9
2517 Female, age 94, left hemisphere 234.9
2814 Male, age 76, right hemisphere 232.3
Basal amygdala
nTPM: 237.3
2827 Female, age 67, right hemisphere 333.5
2609 Male, age 75, right hemisphere 282.0
2685 Female, age 94, left hemisphere 223.0
2110 Male, age 80, left hemisphere 214.2
1955 Male, age 76, both hemispheres 193.8
2243 Female, age 91, right hemisphere 177.5
Central amygdala
nTPM: 258.6
2826 Female, age 94, left hemisphere 440.4
2515 Male, age 75, right hemisphere 270.7
1905 Male, age 76, both hemispheres 200.7
2239 Male, age 80, left hemisphere 193.6
2701 Female, age 91, right hemisphere 187.5
Corticomedial amygdala
nTPM: 222.2
2428 Male, age 75, right hemisphere 249.8
2535 Female, age 67, right hemisphere 229.7
2240 Male, age 76, both hemispheres 227.5
2829 Male, age 80, left hemisphere 225.2
2429 Female, age 94, left hemisphere 200.7
2242 Female, age 91, right hemisphere 200.2
Lateral amygdala
nTPM: 266.9
2830 Female, age 67, right hemisphere 408.4
2516 Male, age 75, right hemisphere 314.6
2534 Female, age 94, left hemisphere 278.1
2256 Male, age 80, left hemisphere 213.9
1883 Male, age 76, both hemispheres 208.3
2255 Female, age 91, right hemisphere 178.3

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1285.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 1285.4
Samples: 152

Max nTPM: 3915.6
Min nTPM: 508.6
Std nTPM: 553.4
Median nTPM: 1128.6
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 3915.6
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 3481.0
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 3006.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 2923.7
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 2637.7
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 2535.5
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 2503.6
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 2268.2
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 2245.8
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 2205.7
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 2193.7
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 2121.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 2080.6
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 2079.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 2028.1
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 2018.7
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 2007.0
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 2001.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 1996.9
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 1878.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 1870.7
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 1821.4
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 1818.6
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 1748.1
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 1739.7
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 1647.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 1602.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 1600.8
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 1588.7
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 1583.8
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 1580.4
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 1564.7
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 1564.3
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1556.7
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 1550.4
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 1523.7
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 1511.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1489.8
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 1472.6
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 1462.5
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1446.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 1443.0
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 1429.7
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 1417.9
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 1415.6
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 1413.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 1403.1
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 1388.8
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 1384.8
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 1363.7
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 1351.8
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1341.0
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 1336.1
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 1331.6
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1330.2
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 1329.8
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 1314.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 1313.3
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 1305.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1298.1
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 1291.8
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 1280.9
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 1272.8
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 1260.7
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 1260.6
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 1248.3
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 1247.3
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 1237.4
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1229.1
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 1218.2
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1202.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 1185.4
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 1180.1
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1151.8
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 1150.5
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 1130.5
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 1126.7
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 1116.2
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 1110.4
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 1082.7
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 1081.4
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 1070.3
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 1069.3
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 1050.5
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 1045.0
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 1040.5
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 1036.1
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 1032.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1027.2
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 1022.5
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 1020.1
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 1012.6
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 1010.7
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 1008.5
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 998.5
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 995.4
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 985.0
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 977.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 977.1
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 975.1
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 974.5
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 972.0
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 970.6
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 965.8
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 960.1
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 957.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 957.3
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 957.1
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 949.8
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 948.4
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 942.0
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 940.3
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 930.9
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 924.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 917.6
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 906.7
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 904.1
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 902.1
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 898.8
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 893.6
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 888.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 888.2
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 886.1
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 884.6
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 878.2
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 870.7
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 857.5
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 855.6
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 846.0
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 844.7
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 843.5
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 822.7
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 818.4
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 810.4
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 801.5
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 793.2
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 772.8
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 756.0
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 753.5
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 749.5
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 726.9
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 725.5
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 723.4
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 705.7
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 694.7
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 677.7
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 654.3
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 619.8
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 596.4
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 572.2
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 568.2
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 508.6
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

46.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 46.0
FF:10151-102I7 76 years, female 46.0

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

220.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 220.5
Samples: 4

Max nTPM: 240.4
Min nTPM: 204.3
Sample A Male 204.3
Sample B Male 217.6
Sample C Female 240.4
Sample D Female 219.5

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.0
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 11.0
69262228 Antisense, RP_050301_01_F08, Mouse strain C57BL/6J (56 days, male) 11.0

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