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  • RPL27A
BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:336.3 nTPM
FANTOM5:64.5 Scaled Tags Per Million
Allen mouse:7.7 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

336.3
Sample id Sample description nTPM
Area postrema
nTPM: 311.8
2306 Male, age 80, both hemispheres 351.2
2799 Male, age 61, both hemispheres 346.6
2054 Male, age 76, both hemispheres 237.7
Dorsal medullary reticular nucleus
nTPM: 243.7
2040 Female, age 85, both hemispheres 271.8
2373 Male, age 61, both hemispheres 262.7
2088 Male, age 76, both hemispheres 196.6
Dorsal motor vagal complex
nTPM: 293.2
2797 Male, age 61, both hemispheres 408.6
2643 Male, age 74, both hemispheres 357.1
2807 Female, age 85, both hemispheres 345.6
2813 Female, age 72, unknown 284.2
2133 Female, age 91, both hemispheres 248.8
2000 Male, age 74, unknown 241.6
2185 Male, age 76, both hemispheres 231.1
2844 Male, age 55, unknown 228.4
Gigantocellular reticular nuclei, medullary
nTPM: 245.4
2314 Male, age 61, both hemispheres 296.1
1876 Female, age 85, both hemispheres 265.1
2022 Male, age 76, right hemisphere 249.2
2387 Female, age 91, both hemispheres 238.3
2310 Male, age 80, both hemispheres 230.8
2462 Male, age 74, both hemispheres 192.8
Gigantocellular reticular nuclei, pars
nTPM: 221.2
2084 Female, age 85, both hemispheres 245.5
2706 Male, age 80, both hemispheres 232.7
2336 Male, age 61, both hemispheres 232.5
2330 Male, age 80, both hemispheres 199.3
2168 Male, age 76, both hemispheres 196.0
Inferior olive
nTPM: 287.8
2178 Male, age 61, both hemispheres 308.0
2628 Female, age 91, both hemispheres 308.0
2563 Male, age 74, both hemispheres 282.6
2085 Female, age 85, both hemispheres 270.7
2379 Male, age 80, both hemispheres 269.8
Lateral medullary reticular nucleus
nTPM: 290.5
2852 Male, age 80, both hemispheres 347.4
2190 Female, age 85, both hemispheres 306.6
2804 Female, age 91, both hemispheres 297.5
2374 Male, age 61, both hemispheres 285.3
2044 Male, age 76, both hemispheres 253.4
2305 Male, age 74, both hemispheres 252.5
Medial olivary nucleus
nTPM: 334.6
1943 Male, age 61, both hemispheres 392.2
2851 Male, age 80, both hemispheres 339.2
1962 Male, age 76, both hemispheres 321.9
2138 Female, age 91, both hemispheres 285.0
Medial vestibular nucleus
nTPM: 252.9
2803 Female, age 91, both hemispheres 308.8
2624 Male, age 61, both hemispheres 285.0
2801 Male, age 74, both hemispheres 274.2
2093 Male, age 80, both hemispheres 230.9
2743 Female, age 85, both hemispheres 227.5
2134 Male, age 76, both hemispheres 190.7
Motor hypoglossal nucleus
nTPM: 249.7
2182 Male, age 80, both hemispheres 315.0
2132 Female, age 85, both hemispheres 273.0
2125 Female, age 91, both hemispheres 248.1
2461 Male, age 61, both hemispheres 227.0
2277 Male, age 76, both hemispheres 185.4
Nucleus ambiguus
nTPM: 237.5
2071 Male, age 76, both hemispheres 285.6
2096 Female, age 85, both hemispheres 189.4
Nucleus cuneatus
nTPM: 262.9
2808 Female, age 85, both hemispheres 361.5
2380 Male, age 80, both hemispheres 319.3
2381 Male, age 80, both hemispheres 297.6
2805 Female, age 91, both hemispheres 285.9
2564 Male, age 74, both hemispheres 274.3
2562 Male, age 61, both hemispheres 241.9
2376 Male, age 61, both hemispheres 236.5
2131 Male, age 76, both hemispheres 184.2
2100 Male, age 76, both hemispheres 164.4
Nucleus gracilis
nTPM: 336.3
2382 Male, age 80, both hemispheres 368.0
2627 Male, age 74, both hemispheres 342.6
2299 Female, age 85, both hemispheres 298.5
Nucleus raphe obscurus
nTPM: 299.3
2845 Female, age 85, midline 318.2
2800 Male, age 61, midline 294.7
2142 Male, age 76, midline 285.0
Nucleus raphe pallidus
nTPM: 327.8
1924 Male, age 61, midline 403.4
2183 Male, age 80, midline 298.6
2145 Male, age 76, midline 281.4
Nucleus tractus solitarii
nTPM: 234.9
2191 Female, age 85, both hemispheres 302.5
2144 Female, age 91, right hemisphere 232.4
2307 Male, age 80, both hemispheres 204.4
2656 Male, age 76, both hemispheres 200.2
Parvicellular reticular nuclei
nTPM: 232.5
2119 Male, age 80, both hemispheres 262.9
2095 Male, age 76, both hemispheres 245.6
2558 Male, age 74, both hemispheres 189.1
Parvicellular reticular nuclei, medullary
nTPM: 243.2
2189 Female, age 91, both hemispheres 245.1
2181 Male, age 80, left hemisphere 244.5
2091 Female, age 85, both hemispheres 239.9
Peritrigeminal nucleus
nTPM: 275.9
2067 Female, age 85, both hemispheres 337.7
2136 Male, age 76, both hemispheres 268.3
2179 Male, age 61, both hemispheres 221.7
Prepositus hypoglossal nucleus
nTPM: 265.4
2855 Female, age 85, right hemisphere 268.3
2086 Male, age 80, both hemispheres 262.5
Spinal trigeminal nucleus, caudal
nTPM: 243.4
2642 Male, age 74, both hemispheres 291.2
2312 Male, age 61, both hemispheres 251.2
2308 Male, age 80, both hemispheres 245.9
2390 Female, age 91, both hemispheres 238.7
2447 Male, age 76, both hemispheres 190.0
Spinal trigeminal nucleus, interpolar
nTPM: 254.3
2033 Male, age 80, both hemispheres 298.1
2386 Female, age 85, both hemispheres 260.9
2389 Female, age 91, both hemispheres 255.8
2625 Male, age 61, both hemispheres 240.5
2066 Male, age 76, right hemisphere 216.4
Spinal vestibular nucleus
nTPM: 281.0
2384 Male, age 74, both hemispheres 310.1
2806 Female, age 85, both hemispheres 301.6
2796 Male, age 61, both hemispheres 299.4
2780 Male, age 80, both hemispheres 283.2
2748 Male, age 76, both hemispheres 246.8
2186 Female, age 91, both hemispheres 245.0
Superior vestibular nucleus
nTPM: 288.1
2383 Male, age 74, both hemispheres 318.2
2015 Male, age 80, both hemispheres 307.4
2061 Male, age 76, both hemispheres 238.7
Ventral medullary reticular nucleus
nTPM: 246.1
2372 Male, age 61, both hemispheres 264.8
2060 Male, age 76, both hemispheres 227.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 273.5
2118 Male, age 80, both hemispheres 317.9
2302 Female, age 91, both hemispheres 275.3
2180 Male, age 61, both hemispheres 262.3
2741 Female, age 85, both hemispheres 258.5
1986 Male, age 76, both hemispheres 253.5

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

64.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 64.5
FF:10174-103C3 60 years, female 133.6
FF:10155-103A2 76 years, female 33.0
FF:10038-101F2 18-64 years, mixed 27.0

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 7.7
69262228 Antisense, RP_050301_01_F08, Mouse strain C57BL/6J (56 days, male) 7.7

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