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RPL27A
HPA
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  • RPL27A
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Endocrine cells: Medium
Enterocytes: Medium
Enterocytes - Microvilli: Not detected
Goblet cells: Medium
Paneth cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1822.9 nTPM
HPA:1208.3 nTPM
GTEx:1822.9 nTPM
FANTOM5:75.5 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA060776Antibody HPA063379
Endocrine cells -Medium
Enterocytes -Medium
Enterocytes - Microvilli -Not detected
Glandular cells Medium-
Goblet cells -Medium
Paneth cells -Medium





SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1208.3
overview
Male, age 65
Small intestine sample 232
nTPM: 1534.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 1093.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 1114.3
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 1090.4

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1822.9
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1822.9
Samples: 187

Max nTPM: 4599.0
Min nTPM: 883.2
Std nTPM: 550.2
Median nTPM: 1737.5
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 4599.0
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 3566.7
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 3546.9
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 3439.1
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 3302.8
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 3255.8
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 3239.7
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2886.5
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 2873.1
GTEX-183FY-1626-SM-793D8 20-29 years, male 2740.6
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 2721.5
GTEX-14PK6-1626-SM-6871I 70-79 years, female 2711.2
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2655.8
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 2653.1
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 2644.2
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 2632.3
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2609.7
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 2590.9
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 2547.7
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 2528.7
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2495.0
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2484.2
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 2452.4
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2451.8
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 2422.8
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 2415.5
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 2329.2
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 2321.9
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 2262.6
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 2256.2
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 2244.9
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 2234.6
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 2233.1
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 2208.8
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 2193.5
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 2166.9
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 2163.9
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 2159.0
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 2155.0
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2146.4
GTEX-1C475-1426-SM-793CH 40-49 years, female 2136.2
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 2134.4
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 2129.0
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 2117.6
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 2108.1
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 2106.4
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 2104.6
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 2104.4
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 2073.3
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 2067.9
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 2046.5
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 2038.7
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 2009.6
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 2000.3
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1999.1
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1997.6
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1986.2
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1978.5
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1973.5
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1972.6
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1957.8
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1952.4
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1937.7
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1931.5
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1914.2
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1910.5
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1897.8
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1892.9
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1891.8
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1890.2
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1888.8
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1888.8
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1887.8
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1876.4
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1875.7
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1869.2
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1848.2
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1841.7
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1828.8
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1826.7
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1826.5
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1823.0
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1822.6
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1794.1
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1792.9
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1786.4
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1784.0
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1775.2
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1769.9
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1759.0
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1757.1
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1757.1
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1740.2
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1737.5
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1735.5
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1722.3
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1721.7
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1703.5
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1697.9
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1693.5
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1690.7
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1689.6
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1683.2
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1681.3
GTEX-1192X-2526-SM-59868 50-59 years, male 1660.0
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1640.4
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1636.7
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1623.7
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1599.5
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1597.4
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1586.8
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1583.2
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1578.8
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1577.2
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1573.9
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1545.8
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1545.4
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1544.6
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1537.6
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1537.1
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1536.2
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1533.1
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1527.8
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1517.9
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1511.3
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1503.1
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1488.9
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1483.7
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1473.1
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1465.8
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1463.5
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1463.3
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1452.9
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1442.9
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1433.9
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1430.3
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1419.6
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1417.1
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1417.0
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1416.1
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1412.6
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1410.6
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1401.9
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1396.0
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1395.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1392.3
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1388.8
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1379.6
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 1376.0
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1368.9
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1368.3
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1360.2
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1347.6
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1346.8
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1343.4
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1341.9
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1331.2
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1329.1
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1319.9
GTEX-14PN3-2026-SM-68729 60-69 years, female 1313.1
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1290.4
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1285.8
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1285.4
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 1280.4
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 1279.1
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1278.1
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1274.0
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1273.6
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1268.3
GTEX-YFCO-1326-SM-664NV 40-49 years, male 1261.4
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1260.3
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 1259.0
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1235.1
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1206.3
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1202.0
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1201.0
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1192.1
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 1188.3
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1187.1
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 1165.6
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 1130.7
GTEX-111YS-1426-SM-5GID8 60-69 years, male 1115.1
GTEX-1122O-1326-SM-5H11F 60-69 years, female 1111.9
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1107.6
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1096.4
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 1084.2
GTEX-ZTSS-0926-SM-59865 40-49 years, male 883.2
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

75.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 75.5
FF:10024-101D6 15,40,85 years, mixed 75.5

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