HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:112.4 nTPM
HPA Brain:504.7 nTPM
GTEx:112.4 nTPM
FANTOM5:944.2 Scaled Tags Per Million
Pig:361.3 nTPM
Mouse:221.4 nTPM
Allen mouse:16.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039063Antibody HPA039064
Glial cells LowNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 504.7
Sample id Sample description nTPM
Hippocampus
nTPM: 473.7
2621 Female, age 67, right hemisphere 605.1
1898 Male, age 80, left hemisphere 518.0
2148 Female, age 91, left hemisphere 496.2
1855 Male, age 76, left hemisphere 427.0
2529 Female, age 94, left hemisphere 401.4
1911 Female, age 85, right hemisphere 394.5
Dentate gyrus
nTPM: 445.1
1927 Female, age 91, both hemispheres 535.8
2530 Female, age 94, left hemisphere 493.6
2531 Female, age 67, both hemispheres 474.1
2246 Female, age 85, both hemispheres 431.1
2010 Male, age 76, both hemispheres 384.3
2528 Male, age 74, both hemispheres 351.7
Entorhinal gyrus
nTPM: 449.8
2613 Female, age 94, left hemisphere 566.5
2764 Male, age 80, right hemisphere 488.3
1938 Female, age 85, left hemisphere 476.8
2686 Male, age 75, right hemisphere 416.6
1787 Male, age 76, left hemisphere 407.2
2117 Female, age 91, right hemisphere 343.6
Hippocampus, CA1
nTPM: 504.7
2749 Male, age 80, left hemisphere 795.3
2527 Male, age 74, both hemispheres 487.6
1873 Female, age 85, both hemispheres 450.6
2082 Female, age 91, right hemisphere 414.7
2045 Male, age 76, both hemispheres 375.5
Hippocampus, CA2
nTPM: 463.7
1963 Male, age 80, left hemisphere 559.0
1892 Male, age 76, both hemispheres 540.4
2437 Female, age 94, left hemisphere 459.8
2113 Female, age 91, right hemisphere 427.5
1940 Female, age 85, left hemisphere 401.6
2249 Male, age 74, both hemispheres 393.6
Hippocampus, CA3
nTPM: 490.2
2137 Male, age 80, left hemisphere 730.4
2861 Female, age 67, both hemispheres 546.1
2620 Female, age 94, left hemisphere 524.2
1867 Male, age 76, both hemispheres 432.8
1891 Female, age 85, both hemispheres 359.1
2436 Male, age 74, both hemispheres 348.9
Parahippocampal cortex
nTPM: 458.4
2245 Female, age 91, both hemispheres 652.6
1850 Male, age 80, both hemispheres 506.1
2532 Female, age 72, left hemisphere 476.1
2622 Female, age 67, right hemisphere 476.0
2250 Female, age 67, right hemisphere 451.6
1933 Female, age 85, both hemispheres 451.3
1990 Female, age 91, right hemisphere 446.2
2693 Female, age 94, both hemispheres 411.7
2692 Male, age 74, both hemispheres 390.2
2018 Male, age 76, both hemispheres 322.1
Perirhinal gyrus
nTPM: 493.4
1847 Female, age 91, left hemisphere 621.9
1794 Male, age 80, right hemisphere 507.4
2521 Female, age 94, right hemisphere 488.8
1841 Female, age 85, right hemisphere 456.4
2848 Male, age 76, right hemisphere 392.3
Subiculum
nTPM: 403.8
2438 Female, age 94, left hemisphere 483.7
1901 Male, age 80, both hemispheres 477.4
1977 Female, age 85, both hemispheres 419.9
2619 Male, age 74, both hemispheres 382.4
2729 Female, age 91, right hemisphere 332.1
2042 Male, age 76, both hemispheres 327.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 112.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 112.4
Samples: 197

Max nTPM: 269.2
Min nTPM: 17.5
Std nTPM: 51.1
Median nTPM: 106.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 269.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 235.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 234.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 232.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 232.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 229.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 224.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 221.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 212.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 210.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 208.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 944.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 944.2
FF:10169-103B7 60 years, female 1220.3
FF:10153-102I9 76 years, female 668.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 361.3
Pig sample Sample description nTPM
Subiculum
nTPM: 306.6
Samples: 4

Max nTPM: 403.4
Min nTPM: 240.7
Sample A Female 403.4
Sample B Female 252.8
Sample C Male 329.6
Sample D Male 240.7
Dorsal hippocampus
nTPM: 330.2
Samples: 4

Max nTPM: 395.3
Min nTPM: 242.8
Sample A Female 395.3
Sample B Female 338.6
Sample C Male 344.1
Sample D Male 242.8
Entorhinal cortex
nTPM: 342.8
Samples: 4

Max nTPM: 396.7
Min nTPM: 308.0
Sample A Female 396.7
Sample B Female 327.9
Sample C Male 308.0
Sample D Male 338.6
Ventral hippocampus
nTPM: 361.3
Samples: 4

Max nTPM: 458.6
Min nTPM: 235.3
Sample A Female 346.1
Sample B Female 235.3
Sample C Male 458.6
Sample D Male 405.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 221.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 221.4
Samples: 4

Max nTPM: 243.3
Min nTPM: 199.9
Sample A Male 237.4
Sample B Male 204.8
Sample C Female 199.9
Sample D Female 243.3
Hippocampal formation
nTPM: 179.8
Samples: 4

Max nTPM: 204.5
Min nTPM: 152.7
Sample A Male 152.7
Sample B Male 197.8
Sample C Female 204.5
Sample D Female 164.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 16.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.4
71570736 Antisense, RP_050505_01_H05, Mouse strain C57BL/6J (56 days, male) 17.5
76115734 Antisense, RP_060620_02_C02, Mouse strain C57BL/6J (56 days, male) 15.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org