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EEF2
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:552.0 nTPM
FANTOM5:663.1 Scaled Tags Per Million
Pig:451.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040534Antibody HPA057351Antibody CAB007795
Glial cells MediumNot detectedLow
Neuronal cells MediumMediumLow







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

552.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 552.0
Samples: 246

Max nTPM: 992.3
Min nTPM: 259.6
Std nTPM: 122.9
Median nTPM: 543.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 992.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 944.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 902.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 892.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 892.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 878.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 863.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 809.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 804.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 800.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 792.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 775.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 767.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 762.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 752.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 743.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 733.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 732.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 731.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 727.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 726.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 721.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 714.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 711.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 708.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 705.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 700.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 698.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 697.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 689.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 688.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 687.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 687.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 681.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 678.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 676.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 675.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 673.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 667.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 659.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 658.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 655.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 654.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 652.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 651.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 650.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 648.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 648.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 644.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 644.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 639.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 638.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 637.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 636.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 636.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 633.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 632.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 631.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 629.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 627.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 626.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 621.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 616.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 616.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 615.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 613.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 612.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 612.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 611.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 608.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 606.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 605.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 604.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 602.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 599.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 598.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 597.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 597.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 596.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 594.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 592.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 589.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 588.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 587.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 587.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 587.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 587.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 586.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 584.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 580.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 579.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 579.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 579.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 579.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 578.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 578.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 577.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 575.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 575.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 574.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 573.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 573.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 572.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 572.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 570.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 570.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 569.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 567.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 566.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 566.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 565.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 561.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 557.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 555.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 555.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 551.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 550.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 549.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 549.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 549.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 546.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 545.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 543.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 542.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 542.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 541.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 540.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 538.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 537.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 536.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 536.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 534.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 534.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 532.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 527.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 527.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 523.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 521.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 519.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 519.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 516.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 515.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 514.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 514.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 512.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 510.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 510.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 509.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 509.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 509.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 508.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 507.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 503.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 502.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 500.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 499.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 498.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 498.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 497.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 495.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 494.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 494.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 493.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 489.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 488.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 488.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 487.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 487.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 482.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 481.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 480.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 479.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 477.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 476.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 475.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 475.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 475.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 472.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 471.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 469.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 465.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 464.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 463.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 462.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 461.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 460.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 457.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 456.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 452.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 451.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 450.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 450.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 449.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 449.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 448.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 448.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 448.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 447.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 446.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 445.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 445.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 442.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 439.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 439.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 438.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 437.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 434.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 434.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 433.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 432.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 430.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 430.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 428.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 426.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 422.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 420.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 419.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 418.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 417.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 414.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 414.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 413.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 410.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 406.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 405.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 405.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 403.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 402.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 401.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 400.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 394.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 392.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 379.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 379.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 376.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 371.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 370.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 370.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 355.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 348.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 347.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 307.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 306.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 287.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 278.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 259.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

663.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 663.1
FF:10164-103B2 76 years, female 663.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

451.3
Pig sample Sample description nTPM
Caudate
nTPM: 451.3
Samples: 4

Max nTPM: 532.2
Min nTPM: 391.5
Sample A Female 391.5
Sample B Female 473.6
Sample C Male 532.2
Sample D Male 408.0

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