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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:54.0 nTPM
HPA Brain:117.7 nTPM
GTEx:54.0 nTPM
FANTOM5:101.8 Scaled Tags Per Million
Pig:41.5 nTPM
Mouse:38.5 nTPM
Allen mouse:2.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA055778Antibody HPA058523Antibody CAB025157
Glial cells LowNot detectedLow
Neuronal cells MediumLowMedium







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 101.5
2290 Female, age 72, unknown 138.3
2846 Female, age 79, unknown 121.0
1781 Male, age 74, unknown 119.9
1857 Female, age 85, left hemisphere 109.5
2289 Male, age 61, right hemisphere 102.5
1854 Male, age 80, left hemisphere 85.5
2288 Male, age 75, left hemisphere 79.3
2481 Female, age 94, left hemisphere 56.2
Globus pallidus, externus
nTPM: 38.2
2772 Female, age 79, unknown 45.7
2646 Male, age 61, right hemisphere 44.8
2567 Female, age 72, unknown 43.5
2395 Male, age 75, both hemispheres 29.8
1996 Male, age 80, right hemisphere 27.3
Globus pallidus, internus
nTPM: 28.4
2483 Female, age 94, right hemisphere 47.4
2566 Female, age 72, unknown 34.7
1818 Male, age 74, unknown 30.7
2037 Male, age 80, right hemisphere 26.7
2287 Male, age 75, right hemisphere 24.2
2778 Female, age 91, both hemispheres 18.8
2111 Female, age 85, right hemisphere 16.4
Nucleus accumbens
nTPM: 84.6
1783 Male, age 74, unknown 127.5
1856 Female, age 91, right hemisphere 110.6
2824 Male, age 61, right hemisphere 100.9
1806 Female, age 85, left hemisphere 99.3
2698 Female, age 72, unknown 80.3
2286 Male, age 75, left hemisphere 71.7
2732 Male, age 80, right hemisphere 49.0
2391 Female, age 94, left hemisphere 37.5
Nucleus basalis of Meynert
nTPM: 71.8
2484 Female, age 94, left hemisphere 80.9
2393 Male, age 80, right hemisphere 69.9
2821 Male, age 75, both hemispheres 69.3
2569 Male, age 61, both hemispheres 67.0
Nucleus of the diagonal band
nTPM: 117.7
2195 Female, age 85, both hemispheres 136.7
2029 Male, age 61, right hemisphere 136.5
2775 Male, age 80, right hemisphere 117.7
1812 Female, age 91, both hemispheres 115.7
1979 Male, age 74, unknown 82.1
Putamen
nTPM: 97.3
2466 Female, age 79, unknown 120.0
2489 Female, age 72, unknown 104.6
2647 Male, age 75, left hemisphere 102.3
1829 Male, age 74, unknown 101.9
1937 Female, age 91, right hemisphere 100.9
1838 Male, age 80, right hemisphere 88.8
2482 Female, age 94, left hemisphere 62.6
Septal nuclei
nTPM: 110.7
1960 Male, age 74, unknown 167.5
2059 Female, age 85, both hemispheres 127.3
2031 Female, age 72, unknown 115.9
2629 Female, age 94, right hemisphere 114.1
2009 Female, age 91, both hemispheres 103.3
2394 Male, age 61, left hemisphere 79.2
2199 Male, age 80, right hemisphere 67.3
Stria terminalis, bed nucleus
nTPM: 101.4
2486 Female, age 94, both hemispheres 116.1
1974 Female, age 91, both hemispheres 114.8
2201 Male, age 74, unknown 73.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 45.3
Samples: 246

Max nTPM: 115.1
Min nTPM: 9.2
Std nTPM: 20.1
Median nTPM: 43.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 115.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 108.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 90.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 88.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 87.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 86.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 85.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 84.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 84.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 84.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 82.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 82.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 80.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 78.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 77.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 76.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 76.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 76.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 76.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 75.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 75.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 73.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 73.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 73.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 73.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 72.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 71.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 70.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 70.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 70.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 69.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 69.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 69.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 68.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 68.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 67.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 67.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 66.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 66.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 66.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 66.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 65.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 65.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 65.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 65.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 64.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 63.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 63.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 63.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 63.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 63.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 63.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 62.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 61.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 61.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 61.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 60.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 60.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 59.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 59.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 59.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 59.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 59.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 59.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 58.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 58.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 58.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 57.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 57.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 57.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 57.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 57.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 57.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 56.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 55.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 55.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 54.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 54.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 54.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 54.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 53.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 53.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 53.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 53.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 52.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 52.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 51.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 51.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 51.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 51.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 50.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 50.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 50.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 50.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 50.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 49.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 49.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 49.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 49.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 49.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 48.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 48.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 48.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 48.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 48.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 48.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 47.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 47.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 46.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 46.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 46.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 46.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 46.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 45.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 44.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 44.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 44.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 44.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 44.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 43.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 43.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 43.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 43.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 42.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 42.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 42.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 42.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 42.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 41.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 41.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 41.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 41.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 41.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 41.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 41.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 40.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 40.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 40.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 40.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 40.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 40.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 40.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 40.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 40.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 39.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 39.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 39.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 39.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 38.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 37.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 37.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 36.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 36.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 36.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 36.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 36.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 36.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 36.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 36.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 36.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 36.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 35.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 35.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 35.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 35.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 35.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 34.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 34.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 34.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 34.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 33.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 33.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 33.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 32.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 32.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 32.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 32.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 32.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 32.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 32.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 31.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 30.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 30.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 30.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 29.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 28.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 28.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 28.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 27.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 27.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 27.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 27.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 27.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 27.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 26.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 26.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 26.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 25.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 25.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 25.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 25.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 24.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 24.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 23.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 23.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 22.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 22.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 22.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 21.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 21.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 21.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 21.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 21.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 21.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 21.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 20.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 20.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 20.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 20.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 20.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 20.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 19.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 19.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 19.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 19.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 19.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 19.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 18.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 18.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 17.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 17.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 16.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 16.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 16.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 15.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 14.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 14.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 14.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 13.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 12.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 12.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 12.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 12.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 12.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 11.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 9.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 54.0
Samples: 246

Max nTPM: 111.5
Min nTPM: 6.1
Std nTPM: 21.1
Median nTPM: 56.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 111.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 97.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 95.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 95.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 95.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 94.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 90.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 90.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 88.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 87.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 87.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 86.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 85.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 85.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 84.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 83.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 83.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 83.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 82.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 82.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 81.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 81.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 81.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 81.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 81.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 80.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 80.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 79.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 78.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 78.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 78.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 78.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 78.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 77.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 76.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 76.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 76.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 76.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 76.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 75.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 75.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 75.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 75.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 75.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 74.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 74.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 73.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 73.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 73.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 72.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 71.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 71.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 71.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 70.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 70.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 70.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 70.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 70.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 69.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 69.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 69.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 69.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 69.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 68.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 68.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 68.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 68.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 68.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 67.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 67.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 66.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 66.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 66.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 66.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 66.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 65.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 65.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 65.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 65.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 65.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 64.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 64.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 64.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 64.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 64.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 63.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 63.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 63.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 63.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 63.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 63.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 63.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 63.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 63.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 63.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 63.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 63.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 63.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 62.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 62.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 62.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 61.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 61.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 60.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 60.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 60.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 60.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 59.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 59.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 59.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 59.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 59.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 58.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 58.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 58.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 58.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 58.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 57.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 57.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 57.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 56.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 56.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 56.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 56.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 56.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 56.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 56.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 55.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 55.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 54.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 54.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 53.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 53.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 53.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 53.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 53.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 53.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 52.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 52.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 52.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 52.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 51.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 51.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 51.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 51.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 51.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 50.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 50.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 50.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 49.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 49.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 49.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 49.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 49.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 49.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 48.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 48.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 47.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 47.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 46.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 45.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 45.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 44.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 44.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 44.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 44.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 43.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 43.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 42.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 42.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 41.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 41.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 41.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 40.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 40.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 40.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 39.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 39.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 39.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 39.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 39.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 38.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 37.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 37.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 36.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 36.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 36.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 35.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 35.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 35.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 35.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 34.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 34.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 33.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 33.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 33.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 32.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 32.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 32.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 32.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 31.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 31.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 31.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 31.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 30.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 28.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 28.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 28.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 28.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 27.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 27.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 26.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 26.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 25.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 25.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 24.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 24.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 24.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 24.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 24.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 23.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 23.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 23.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 22.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 22.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 22.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 21.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 21.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 21.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 21.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 21.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 21.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 21.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 19.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 19.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 18.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 17.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 17.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 16.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 16.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 14.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 13.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 11.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 9.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 7.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 6.1
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Brain - Putamen (basal ganglia)
Average nTPM: 43.5
Samples: 205

Max nTPM: 106.0
Min nTPM: 8.5
Std nTPM: 19.6
Median nTPM: 43.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 106.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 93.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 90.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 90.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 89.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 88.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 86.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 82.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 81.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 80.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 79.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 76.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 75.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 75.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 73.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 73.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 73.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 73.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 72.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 72.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 71.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 67.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 67.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 66.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 66.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 65.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 64.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 64.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 64.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 63.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 63.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 62.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 62.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 62.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 62.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 61.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 60.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 60.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 59.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 59.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 59.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 58.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 58.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 58.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 58.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 58.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 57.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 57.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 57.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 56.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 55.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 55.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 55.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 54.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 54.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 54.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 54.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 54.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 53.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 53.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 53.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 53.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 53.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 53.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 52.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 52.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 52.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 52.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 51.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 51.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 51.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 51.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 50.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 50.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 50.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 50.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 49.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 49.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 49.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 49.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 49.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 48.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 48.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 48.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 48.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 48.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 48.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 47.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 47.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 47.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 47.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 45.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 45.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 45.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 45.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 44.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 44.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 43.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 43.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 43.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 43.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 43.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 43.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 42.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 42.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 41.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 41.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 41.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 40.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 40.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 40.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 40.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 40.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 39.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 39.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 39.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 39.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 38.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 38.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 37.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 36.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 36.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 35.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 35.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 35.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 34.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 34.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 34.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 34.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 33.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 33.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 33.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 33.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 33.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 33.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 32.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 32.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 31.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 31.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 31.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 31.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 31.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 30.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 30.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 29.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 29.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 29.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 29.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 29.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 28.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 28.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 27.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 27.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 27.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 26.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 26.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 26.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 26.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 26.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 26.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 25.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 25.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 25.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 25.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 25.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 24.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 24.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 24.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 23.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 23.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 22.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 22.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 21.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 21.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 21.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 21.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 20.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 20.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 20.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 20.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 19.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 19.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 19.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 19.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 18.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 18.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 17.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 17.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 17.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 17.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 16.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 16.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 16.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 16.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 15.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 15.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 15.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 15.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 14.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 13.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 12.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 11.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 10.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 9.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 8.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

101.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 91.2
FF:10164-103B2 76 years, female 91.2
Nucleus accumbens
Scaled Tags Per Million: 82.8
FF:10037-101F1 23-56 years, mixed 82.8
Putamen
Scaled Tags Per Million: 101.8
FF:10176-103C5 60 years, female 101.8
Globus pallidus
Scaled Tags Per Million: 45.6
FF:10175-103C4 60 years, female 50.2
FF:10161-103A8 76 years, female 41.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.5
Pig sample Sample description nTPM
Caudate
nTPM: 41.5
Samples: 4

Max nTPM: 54.7
Min nTPM: 28.0
Sample A Female 28.0
Sample B Female 42.0
Sample C Male 54.7
Sample D Male 41.4
Putamen
nTPM: 38.3
Samples: 4

Max nTPM: 52.3
Min nTPM: 14.9
Sample A Female 14.9
Sample B Female 37.8
Sample C Male 52.3
Sample D Male 48.1
Septum
nTPM: 26.3
Samples: 4

Max nTPM: 30.3
Min nTPM: 21.4
Sample A Female 30.3
Sample B Female 28.2
Sample C Male 21.4
Sample D Male 25.3
Ventral pallidum
nTPM: 29.1
Samples: 4

Max nTPM: 32.2
Min nTPM: 25.8
Sample A Female 32.2
Sample B Female 25.8
Sample C Male 28.1
Sample D Male 30.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 37.7
Samples: 4

Max nTPM: 45.4
Min nTPM: 32.2
Sample A Male 36.8
Sample B Male 45.4
Sample C Female 32.2
Sample D Female 36.5
Septum
nTPM: 38.1
Samples: 4

Max nTPM: 39.3
Min nTPM: 35.0
Sample A Male 39.0
Sample B Male 38.9
Sample C Female 39.3
Sample D Female 35.0
Ventral forebrain
nTPM: 38.5
Samples: 4

Max nTPM: 41.5
Min nTPM: 35.7
Sample A Male 41.5
Sample B Male 35.7
Sample C Female 40.3
Sample D Female 36.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.3
72001866 Antisense, RP_050915_02_D08, Mouse strain C57BL/6J (56 days, male) 2.3
Pallidum
Expression energy: 1.5
72001866 Antisense, RP_050915_02_D08, Mouse strain C57BL/6J (56 days, male) 1.5

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