HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:77.3 nTPM
HPA Brain:202.5 nTPM
GTEx:77.3 nTPM
FANTOM5:98.7 Scaled Tags Per Million
Pig:46.1 nTPM
Mouse:38.3 nTPM
Allen mouse:4.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055778Antibody HPA058523Antibody CAB025157
Glial cells LowNot detectedLow
Neuronal cells MediumNot detectedMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 202.5
Sample id Sample description nTPM
Hippocampus
nTPM: 202.5
2621 Female, age 67, right hemisphere 289.6
2148 Female, age 91, left hemisphere 215.9
1911 Female, age 85, right hemisphere 188.0
2529 Female, age 94, left hemisphere 179.2
1855 Male, age 76, left hemisphere 171.2
1898 Male, age 80, left hemisphere 171.2
Dentate gyrus
nTPM: 174.9
1927 Female, age 91, both hemispheres 228.7
2531 Female, age 67, both hemispheres 207.9
2530 Female, age 94, left hemisphere 202.6
2010 Male, age 76, both hemispheres 147.7
2528 Male, age 74, both hemispheres 143.3
2246 Female, age 85, both hemispheres 119.4
Entorhinal gyrus
nTPM: 144.1
2613 Female, age 94, left hemisphere 232.5
1938 Female, age 85, left hemisphere 148.2
2686 Male, age 75, right hemisphere 146.1
2764 Male, age 80, right hemisphere 126.1
1787 Male, age 76, left hemisphere 119.0
2117 Female, age 91, right hemisphere 92.6
Hippocampus, CA1
nTPM: 185.2
2749 Male, age 80, left hemisphere 295.3
2527 Male, age 74, both hemispheres 195.7
1873 Female, age 85, both hemispheres 177.2
2082 Female, age 91, right hemisphere 143.8
2045 Male, age 76, both hemispheres 114.1
Hippocampus, CA2
nTPM: 165.5
1963 Male, age 80, left hemisphere 255.6
2113 Female, age 91, right hemisphere 162.8
2249 Male, age 74, both hemispheres 162.2
1892 Male, age 76, both hemispheres 149.4
2437 Female, age 94, left hemisphere 145.0
1940 Female, age 85, left hemisphere 117.8
Hippocampus, CA3
nTPM: 189.1
2861 Female, age 67, both hemispheres 338.0
2137 Male, age 80, left hemisphere 261.2
2620 Female, age 94, left hemisphere 193.6
2436 Male, age 74, both hemispheres 123.3
1867 Male, age 76, both hemispheres 118.0
1891 Female, age 85, both hemispheres 100.6
Parahippocampal cortex
nTPM: 139.6
2245 Female, age 91, both hemispheres 217.8
2622 Female, age 67, right hemisphere 193.3
2250 Female, age 67, right hemisphere 148.9
2692 Male, age 74, both hemispheres 133.8
1933 Female, age 85, both hemispheres 129.6
2018 Male, age 76, both hemispheres 122.3
1990 Female, age 91, right hemisphere 121.7
2693 Female, age 94, both hemispheres 115.0
2532 Female, age 72, left hemisphere 106.6
1850 Male, age 80, both hemispheres 106.5
Perirhinal gyrus
nTPM: 128.2
1847 Female, age 91, left hemisphere 175.0
2521 Female, age 94, right hemisphere 164.2
1794 Male, age 80, right hemisphere 111.1
1841 Female, age 85, right hemisphere 105.4
2848 Male, age 76, right hemisphere 85.5
Subiculum
nTPM: 114.3
2619 Male, age 74, both hemispheres 126.8
2729 Female, age 91, right hemisphere 126.4
1901 Male, age 80, both hemispheres 126.2
1977 Female, age 85, both hemispheres 110.6
2042 Male, age 76, both hemispheres 110.1
2438 Female, age 94, left hemisphere 85.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 77.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 77.3
Samples: 197

Max nTPM: 371.3
Min nTPM: 6.0
Std nTPM: 48.6
Median nTPM: 71.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 371.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 194.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 188.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 188.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 185.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 181.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 174.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 166.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 165.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 159.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 158.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 98.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.7
FF:10169-103B7 60 years, female 101.7
FF:10153-102I9 76 years, female 95.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 46.1
Pig sample Sample description nTPM
Subiculum
nTPM: 42.9
Samples: 4

Max nTPM: 57.7
Min nTPM: 36.5
Sample A Female 57.7
Sample B Female 37.8
Sample C Male 39.7
Sample D Male 36.5
Dorsal hippocampus
nTPM: 46.1
Samples: 4

Max nTPM: 62.8
Min nTPM: 29.2
Sample A Female 62.8
Sample B Female 54.8
Sample C Male 29.2
Sample D Male 37.5
Entorhinal cortex
nTPM: 45.3
Samples: 4

Max nTPM: 57.4
Min nTPM: 36.9
Sample A Female 47.7
Sample B Female 36.9
Sample C Male 57.4
Sample D Male 39.0
Ventral hippocampus
nTPM: 44.3
Samples: 4

Max nTPM: 52.8
Min nTPM: 29.4
Sample A Female 43.7
Sample B Female 29.4
Sample C Male 51.1
Sample D Male 52.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 38.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.3
Samples: 4

Max nTPM: 47.4
Min nTPM: 34.3
Sample A Male 36.2
Sample B Male 35.3
Sample C Female 34.3
Sample D Female 47.4
Hippocampal formation
nTPM: 37.6
Samples: 4

Max nTPM: 39.8
Min nTPM: 33.6
Sample A Male 33.6
Sample B Male 39.1
Sample C Female 39.8
Sample D Female 38.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.3
72001866 Antisense, RP_050915_02_D08, Mouse strain C57BL/6J (56 days, male) 4.3

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