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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:289.8 nTPM
HPA Brain:490.1 nTPM
GTEx:289.8 nTPM
FANTOM5:963.7 Scaled Tags Per Million
Pig:395.5 nTPM
Mouse:472.7 nTPM
Allen mouse:18.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA069318
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

490.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 490.1
1857 Female, age 85, left hemisphere 550.9
2290 Female, age 72, unknown 547.1
2288 Male, age 75, left hemisphere 526.2
2289 Male, age 61, right hemisphere 518.6
1854 Male, age 80, left hemisphere 509.0
2846 Female, age 79, unknown 488.4
1781 Male, age 74, unknown 474.0
2481 Female, age 94, left hemisphere 306.7
Globus pallidus, externus
nTPM: 59.2
2646 Male, age 61, right hemisphere 105.5
2395 Male, age 75, both hemispheres 68.5
2772 Female, age 79, unknown 52.5
2567 Female, age 72, unknown 45.1
1996 Male, age 80, right hemisphere 24.1
Globus pallidus, internus
nTPM: 50.8
2483 Female, age 94, right hemisphere 174.1
1818 Male, age 74, unknown 52.7
2566 Female, age 72, unknown 41.0
2037 Male, age 80, right hemisphere 32.5
2287 Male, age 75, right hemisphere 22.8
2111 Female, age 85, right hemisphere 16.1
2778 Female, age 91, both hemispheres 16.1
Nucleus accumbens
nTPM: 462.8
1856 Female, age 91, right hemisphere 762.8
2824 Male, age 61, right hemisphere 615.5
1783 Male, age 74, unknown 597.3
1806 Female, age 85, left hemisphere 511.7
2286 Male, age 75, left hemisphere 458.9
2698 Female, age 72, unknown 354.9
2391 Female, age 94, left hemisphere 217.0
2732 Male, age 80, right hemisphere 184.5
Nucleus basalis of Meynert
nTPM: 337.9
2484 Female, age 94, left hemisphere 506.1
2393 Male, age 80, right hemisphere 381.9
2821 Male, age 75, both hemispheres 305.8
2569 Male, age 61, both hemispheres 157.6
Nucleus of the diagonal band
nTPM: 377.1
1812 Female, age 91, both hemispheres 461.0
2029 Male, age 61, right hemisphere 458.8
2775 Male, age 80, right hemisphere 369.9
2195 Female, age 85, both hemispheres 365.3
1979 Male, age 74, unknown 230.5
Putamen
nTPM: 486.2
1937 Female, age 91, right hemisphere 640.0
1838 Male, age 80, right hemisphere 606.6
1829 Male, age 74, unknown 499.4
2466 Female, age 79, unknown 487.1
2647 Male, age 75, left hemisphere 473.9
2489 Female, age 72, unknown 367.2
2482 Female, age 94, left hemisphere 329.5
Septal nuclei
nTPM: 295.9
1960 Male, age 74, unknown 426.3
2031 Female, age 72, unknown 371.6
2009 Female, age 91, both hemispheres 362.8
2629 Female, age 94, right hemisphere 333.6
2059 Female, age 85, both hemispheres 279.4
2394 Male, age 61, left hemisphere 169.1
2199 Male, age 80, right hemisphere 128.4
Stria terminalis, bed nucleus
nTPM: 326.1
2486 Female, age 94, both hemispheres 415.5
1974 Female, age 91, both hemispheres 408.6
2201 Male, age 74, unknown 154.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

289.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 244.9
Samples: 246

Max nTPM: 541.4
Min nTPM: 18.7
Std nTPM: 133.8
Median nTPM: 244.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 541.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 532.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 526.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 517.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 514.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 497.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 489.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 489.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 487.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 484.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 483.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 469.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 459.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 457.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 451.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 451.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 448.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 446.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 432.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 429.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 429.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 426.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 423.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 422.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 422.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 422.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 417.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 415.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 412.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 405.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 405.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 405.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 402.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 400.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 399.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 397.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 396.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 395.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 395.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 395.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 394.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 392.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 391.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 386.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 384.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 383.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 380.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 379.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 375.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 374.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 374.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 373.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 372.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 371.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 369.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 369.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 368.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 367.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 366.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 363.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 359.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 357.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 355.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 354.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 351.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 351.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 350.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 349.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 345.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 340.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 340.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 339.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 336.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 333.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 330.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 328.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 327.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 326.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 325.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 324.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 322.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 317.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 316.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 315.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 311.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 310.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 307.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 307.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 306.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 301.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 300.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 298.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 298.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 295.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 293.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 292.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 283.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 281.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 280.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 278.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 278.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 278.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 276.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 274.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 272.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 267.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 267.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 265.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 264.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 264.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 263.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 263.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 262.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 262.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 261.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 260.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 260.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 256.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 254.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 253.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 251.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 251.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 246.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 241.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 241.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 239.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 237.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 235.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 234.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 233.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 230.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 228.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 226.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 225.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 225.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 222.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 222.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 220.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 213.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 209.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 207.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 206.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 205.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 203.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 200.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 200.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 200.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 194.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 193.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 191.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 190.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 189.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 189.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 188.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 183.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 183.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 178.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 178.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 174.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 173.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 172.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 171.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 170.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 169.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 164.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 160.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 157.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 155.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 155.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 152.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 152.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 150.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 150.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 148.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 143.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 141.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 140.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 139.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 138.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 136.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 132.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 131.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 129.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 127.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 125.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 121.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 118.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 118.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 115.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 113.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 110.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 108.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 107.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 107.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 107.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 106.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 105.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 104.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 101.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 101.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 100.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 97.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 96.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 95.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 95.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 90.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 89.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 85.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 85.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 80.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 79.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 79.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 77.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 77.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 77.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 77.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 73.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 72.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 71.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 71.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 69.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 68.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 67.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 65.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 65.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 64.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 60.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 59.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 56.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 55.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 54.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 52.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 52.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 51.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 50.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 46.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 46.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 39.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 37.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 37.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 26.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 26.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 25.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 25.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 25.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 18.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 289.8
Samples: 246

Max nTPM: 701.6
Min nTPM: 6.1
Std nTPM: 145.8
Median nTPM: 319.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 701.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 640.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 597.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 589.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 585.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 579.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 564.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 550.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 523.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 506.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 505.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 502.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 499.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 496.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 484.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 481.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 480.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 480.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 474.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 469.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 467.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 463.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 462.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 461.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 457.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 454.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 453.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 452.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 451.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 451.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 449.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 443.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 443.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 441.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 440.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 434.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 431.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 431.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 428.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 425.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 423.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 421.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 420.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 419.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 418.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 416.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 415.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 414.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 413.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 412.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 409.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 407.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 407.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 407.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 407.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 404.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 401.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 401.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 398.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 397.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 394.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 394.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 392.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 391.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 391.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 390.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 389.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 387.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 387.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 386.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 386.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 382.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 382.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 381.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 380.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 377.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 375.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 375.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 375.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 374.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 373.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 372.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 367.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 365.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 364.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 363.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 361.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 358.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 354.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 353.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 353.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 352.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 352.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 351.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 350.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 350.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 348.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 347.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 345.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 345.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 345.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 344.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 342.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 338.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 337.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 337.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 336.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 335.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 335.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 334.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 332.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 332.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 329.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 328.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 328.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 328.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 327.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 327.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 324.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 324.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 323.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 322.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 321.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 317.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 317.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 317.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 316.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 315.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 315.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 314.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 314.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 312.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 311.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 311.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 305.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 303.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 298.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 297.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 294.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 293.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 290.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 290.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 288.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 287.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 285.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 282.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 282.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 274.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 273.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 268.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 265.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 262.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 261.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 257.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 246.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 245.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 240.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 239.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 238.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 237.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 237.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 235.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 234.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 231.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 228.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 224.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 220.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 216.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 216.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 213.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 209.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 209.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 209.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 198.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 195.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 194.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 186.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 178.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 176.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 175.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 173.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 171.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 171.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 169.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 167.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 167.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 151.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 147.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 144.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 142.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 141.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 141.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 140.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 135.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 129.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 128.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 127.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 126.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 125.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 124.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 122.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 121.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 120.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 116.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 114.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 111.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 109.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 108.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 106.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 106.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 105.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 99.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 97.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 92.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 90.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 90.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 90.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 89.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 85.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 80.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 77.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 77.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 74.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 71.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 69.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 65.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 64.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 64.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 63.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 60.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 56.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 54.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 53.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 50.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 40.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 33.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 32.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 29.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 28.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 25.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 25.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 23.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 18.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 16.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 13.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 6.1
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Brain - Putamen (basal ganglia)
Average nTPM: 233.3
Samples: 205

Max nTPM: 538.0
Min nTPM: 11.8
Std nTPM: 139.2
Median nTPM: 227.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 538.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 534.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 530.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 527.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 525.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 519.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 517.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 499.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 499.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 493.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 477.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 477.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 474.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 469.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 448.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 426.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 424.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 422.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 417.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 414.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 411.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 409.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 409.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 407.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 406.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 402.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 402.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 400.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 398.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 395.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 393.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 388.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 386.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 382.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 379.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 375.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 373.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 372.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 371.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 367.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 367.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 365.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 365.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 357.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 357.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 354.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 352.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 351.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 350.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 349.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 348.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 347.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 346.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 342.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 341.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 339.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 338.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 338.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 335.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 333.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 330.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 328.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 326.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 325.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 324.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 323.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 319.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 311.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 309.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 306.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 300.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 296.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 294.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 288.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 288.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 286.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 282.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 281.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 279.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 274.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 273.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 272.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 269.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 267.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 264.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 263.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 260.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 255.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 252.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 247.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 247.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 245.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 241.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 241.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 239.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 237.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 235.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 233.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 230.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 230.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 228.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 227.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 227.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 225.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 222.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 219.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 218.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 217.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 214.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 214.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 213.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 210.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 206.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 201.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 195.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 191.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 186.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 185.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 183.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 176.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 175.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 174.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 171.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 168.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 165.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 160.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 159.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 159.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 158.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 157.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 154.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 153.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 151.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 150.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 147.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 147.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 145.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 141.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 141.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 141.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 139.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 133.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 133.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 132.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 131.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 128.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 127.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 127.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 125.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 121.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 120.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 120.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 117.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 116.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 106.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 104.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 101.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 101.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 100.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 97.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 96.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 95.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 94.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 92.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 92.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 91.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 87.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 87.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 86.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 82.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 76.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 76.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 75.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 66.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 65.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 63.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 63.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 63.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 62.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 62.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 62.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 62.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 61.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 60.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 60.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 58.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 57.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 54.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 50.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 49.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 46.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 43.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 43.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 39.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 38.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 33.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 33.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 30.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 26.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 25.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 24.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 23.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 18.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 13.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 11.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

963.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 670.6
FF:10164-103B2 76 years, female 670.6
Nucleus accumbens
Scaled Tags Per Million: 731.7
FF:10037-101F1 23-56 years, mixed 731.7
Putamen
Scaled Tags Per Million: 963.7
FF:10176-103C5 60 years, female 963.7
Globus pallidus
Scaled Tags Per Million: 210.9
FF:10175-103C4 60 years, female 352.3
FF:10161-103A8 76 years, female 69.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

395.5
Pig sample Sample description nTPM
Caudate
nTPM: 395.5
Samples: 4

Max nTPM: 515.7
Min nTPM: 293.7
Sample A Female 293.7
Sample B Female 384.5
Sample C Male 515.7
Sample D Male 388.0
Putamen
nTPM: 370.0
Samples: 4

Max nTPM: 575.2
Min nTPM: 115.8
Sample A Female 115.8
Sample B Female 332.9
Sample C Male 575.2
Sample D Male 456.1
Septum
nTPM: 141.1
Samples: 4

Max nTPM: 210.9
Min nTPM: 67.3
Sample A Female 210.9
Sample B Female 175.7
Sample C Male 67.3
Sample D Male 110.6
Ventral pallidum
nTPM: 204.7
Samples: 4

Max nTPM: 281.4
Min nTPM: 95.3
Sample A Female 281.4
Sample B Female 209.3
Sample C Male 95.3
Sample D Male 232.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

472.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 472.7
Samples: 4

Max nTPM: 537.1
Min nTPM: 387.6
Sample A Male 521.5
Sample B Male 537.1
Sample C Female 387.6
Sample D Female 444.6
Septum
nTPM: 212.0
Samples: 4

Max nTPM: 224.4
Min nTPM: 205.3
Sample A Male 208.4
Sample B Male 224.4
Sample C Female 205.3
Sample D Female 209.8
Ventral forebrain
nTPM: 300.6
Samples: 4

Max nTPM: 330.5
Min nTPM: 275.9
Sample A Male 305.0
Sample B Male 291.1
Sample C Female 330.5
Sample D Female 275.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 18.0
544328 Antisense, RP_040625_01_H06, Mouse strain C57BL/6J (56 days, male) 18.3
71608455 Antisense, RP_050927_01_G05, Mouse strain C57BL/6J (56 days, male) 17.7
Pallidum
Expression energy: 11.5
544328 Antisense, RP_040625_01_H06, Mouse strain C57BL/6J (56 days, male) 13.9
71608455 Antisense, RP_050927_01_G05, Mouse strain C57BL/6J (56 days, male) 9.2

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